RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 SF3A2Q15428 464 aaKnown RBP17.45■□□□□ 0.38
CPSF3-201ENST00000238112 TMEM91Q6ZNR0 172 aa17.45■□□□□ 0.38
CPSF3-201ENST00000238112 ABI3BPQ7Z7G0 1075 aa17.45■□□□□ 0.38
CPSF3-201ENST00000238112 RANBP3LQ86VV4 465 aaPredicted RBP17.45■□□□□ 0.38
CPSF3-201ENST00000238112 TCTE3Q8IZS6 198 aa17.45■□□□□ 0.38
CPSF3-201ENST00000238112 ACBD7Q8N6N7 88 aa17.45■□□□□ 0.38
CPSF3-201ENST00000238112 NLGN4YQ8NFZ3 816 aaPredicted RBP17.45■□□□□ 0.38
CPSF3-201ENST00000238112 OR52L1Q8NGH7 329 aa17.45■□□□□ 0.38
CPSF3-201ENST00000238112 ACOT12Q8WYK0 555 aa17.45■□□□□ 0.38
CPSF3-201ENST00000238112 RIPOR3Q96MK2 946 aa17.45■□□□□ 0.38
CPSF3-201ENST00000238112 COLEC10Q9Y6Z7 277 aa17.45■□□□□ 0.38
CPSF3-201ENST00000238112 UNC119BA6NIH7 251 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 C12orf71A8MTZ7 269 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 GTPBP1O00178 669 aaKnown RBP17.44■□□□□ 0.38
CPSF3-201ENST00000238112 CLDN2P57739 230 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 ZNF57Q68EA5 555 aaPredicted RBP17.44■□□□□ 0.38
CPSF3-201ENST00000238112 B3GLCTQ6Y288 498 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 GET4Q7L5D6 327 aaPredicted RBP17.44■□□□□ 0.38
CPSF3-201ENST00000238112 OR4E2Q8NGC2 313 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 FANK1Q8TC84 345 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 ART5Q96L15 291 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 C10orf90Q96M02 699 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 C1QTNF2Q9BXJ5 285 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 HEBP2Q9Y5Z4 205 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 PRR19A6NJB7 356 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 RNF144AP50876 292 aaPredicted RBP17.44■□□□□ 0.38
CPSF3-201ENST00000238112 RPS15AP62244 130 aaKnown RBP17.44■□□□□ 0.38
CPSF3-201ENST00000238112 TNFRSF17Q02223 184 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 CSTF1Q05048 431 aaKnown RBP17.44■□□□□ 0.38
CPSF3-201ENST00000238112 RUNX3Q13761 415 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 GPR68Q15743 365 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 ARHGAP11BQ3KRB8 267 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 IDNKQ5T6J7 187 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 AMIGO1Q86WK6 493 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 SAMD14Q8IZD0 417 aaPredicted RBP17.44■□□□□ 0.38
CPSF3-201ENST00000238112 YIPF7Q8N8F6 280 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 GRPEL2Q8TAA5 225 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 BRIX1Q8TDN6 353 aaKnown RBP17.44■□□□□ 0.38
CPSF3-201ENST00000238112 LCN9Q8WX39 176 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 ARMC5Q96C12 935 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 ALG8Q9BVK2 526 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 DPH1Q9BZG8 443 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 OR52D1Q9H346 318 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 KIR3DX1Q9H7L2 352 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 BABAM2Q9NXR7 383 aa17.44■□□□□ 0.38
CPSF3-201ENST00000238112 SGK494L7N484 410 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 ORC5O43913 435 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 RNGTTO60942 597 aaKnown RBP17.43■□□□□ 0.38
CPSF3-201ENST00000238112 CTBP2P56545 445 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 CLDN20P56880 219 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 YIF1BQ5BJH7 314 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 TIGD3Q6B0B8 471 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 NIPAL3Q6P499 406 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 SMARCD3Q6STE5 483 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 DGLUCYQ7Z3D6 616 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 VN1R4Q7Z5H5 301 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 ASPGQ86U10 573 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 OR4K14Q8NGD5 310 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 CD180Q99467 661 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 TBX5Q99593 518 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 KCNJ15Q99712 375 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 NTMQ9P121 344 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 EXTL2Q9UBQ6 330 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 MAU2Q9Y6X3 613 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 J3QRE1 110 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 BTN3A3O00478 584 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 ZGLP1P0C6A0 271 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 BMP7P18075 431 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 ERP29P30040 261 aaKnown RBP17.43■□□□□ 0.38
CPSF3-201ENST00000238112 MTNR1BP49286 362 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 FZD5Q13467 585 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 DUSP5Q16690 384 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 MEPCEQ7L2J0 689 aaKnown RBP17.43■□□□□ 0.38
CPSF3-201ENST00000238112 ADGRD2Q7Z7M1 963 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 PAQR7Q86WK9 346 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 UPRTQ96BW1 309 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 SLC17A9Q9BYT1 436 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 MED20Q9H944 212 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 RPRD1BQ9NQG5 326 aaKnown RBP17.43■□□□□ 0.38
CPSF3-201ENST00000238112 OR6C2Q9NZP2 312 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 PHF11Q9UIL8 331 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 CHD7Q9P2D1 2997 aa17.43■□□□□ 0.38
CPSF3-201ENST00000238112 A0A1W2PQU0 124 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 TRAPPC13A5PLN9 417 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 SLC35G6P0C7Q6 338 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 FAM157BP0CG42 384 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 ELK1P19419 428 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 IGFALSP35858 605 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 ZNF136P52737 540 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 EEF1A1P68104 462 aaKnown RBP17.42■□□□□ 0.38
CPSF3-201ENST00000238112 DUSP8Q13202 625 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 CCDC85BQ15834 202 aaPredicted RBP17.42■□□□□ 0.38
CPSF3-201ENST00000238112 CCNJQ5T5M9 372 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 TANGO2Q6ICL3 276 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 OR4N5Q8IXE1 308 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 OR2L13Q8N349 312 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 OR14C36Q8NHC7 312 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 HDHD2Q9H0R4 259 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 FN3KQ9H479 309 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 TRIM36Q9NQ86 728 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms