RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SNIP1Q8TAD8 396 aaKnown RBP17.34■□□□□ 0.37
CLIP2-201ENST00000223398 SPTSSAQ969W0 71 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 PLEK2Q9NYT0 353 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 BAIAP2Q9UQB8 552 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 PCDHGA7Q9Y5G6 932 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 C17orf113A0A1B0GUU1 675 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 EEF1E1O43324 174 aaKnown RBP17.34■□□□□ 0.37
CLIP2-201ENST00000223398 IMPA1P29218 277 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 CSNK2A1P68400 391 aaPredicted RBP17.34■□□□□ 0.37
CLIP2-201ENST00000223398 PRR18Q8N4B5 295 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 SLC30A3Q99726 388 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 SLC2A5P22732 501 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 OR8H3Q8N146 312 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 LMF1Q96S06 567 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 HINT2Q9BX68 163 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 RRP8O43159 456 aaKnown RBP17.34■□□□□ 0.37
CLIP2-201ENST00000223398 PRKRAO75569 313 aaKnown RBP17.34■□□□□ 0.37
CLIP2-201ENST00000223398 SFTPBP07988 381 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 CSNK1A1P48729 337 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 COQ5Q5HYK3 327 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 ADAMTSL4Q6UY14 1074 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 FAM217AQ8IXS0 508 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 LINC01465Q8N7H1 131 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 HTR3BO95264 441 aa17.33■□□□□ 0.37
CLIP2-201ENST00000223398 FBXO45P0C2W1 286 aa17.33■□□□□ 0.37
CLIP2-201ENST00000223398 DCTP40126 519 aa17.33■□□□□ 0.37
CLIP2-201ENST00000223398 DAP3P51398 398 aaKnown RBP17.33■□□□□ 0.37
CLIP2-201ENST00000223398 SYPL1Q16563 259 aa17.33■□□□□ 0.37
CLIP2-201ENST00000223398 LRRC37A5PQ49AS3 106 aa17.33■□□□□ 0.37
CLIP2-201ENST00000223398 TP53I3Q53FA7 332 aa17.33■□□□□ 0.37
CLIP2-201ENST00000223398 KIAA1211LQ6NV74 962 aa17.33■□□□□ 0.37
CLIP2-201ENST00000223398 SLC37A3Q8NCC5 494 aa17.33■□□□□ 0.37
CLIP2-201ENST00000223398 WBP2Q969T9 261 aa17.33■□□□□ 0.37
CLIP2-201ENST00000223398 MSANTD3Q96H12 275 aa17.33■□□□□ 0.37
CLIP2-201ENST00000223398 SORT1Q99523 831 aa17.33■□□□□ 0.37
CLIP2-201ENST00000223398 UTP23Q9BRU9 249 aaKnown RBP17.33■□□□□ 0.37
CLIP2-201ENST00000223398 MRPL15Q9P015 296 aaKnown RBP17.33■□□□□ 0.37
CLIP2-201ENST00000223398 DDX60Q8IY21 1712 aaKnown RBP17.33■□□□□ 0.37
CLIP2-201ENST00000223398 ITGB4P16144 1822 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 ISPDA4D126 451 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 K7ESM1 405 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 PENKP01210 267 aaPredicted RBP17.33■□□□□ 0.36
CLIP2-201ENST00000223398 AHRP35869 848 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 SMAD4Q13485 552 aaKnown RBP17.33■□□□□ 0.36
CLIP2-201ENST00000223398 AWAT2Q6E213 333 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 ADIPOR2Q86V24 386 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 MFSD8Q8NHS3 518 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 NXF5Q9H1B4 397 aaKnown RBP17.33■□□□□ 0.36
CLIP2-201ENST00000223398 BOKQ9UMX3 212 aaPredicted RBP17.33■□□□□ 0.36
CLIP2-201ENST00000223398 SLC35A3Q9Y2D2 325 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 TRAV27A0A087WT01 109 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 PRRT4C9JH25 899 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 M0R129 80 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 DLGAP1O14490 977 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 HSD17B1P14061 328 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 MAGEA8P43361 318 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 SLC22A16Q86VW1 577 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 ZNF740Q8NDX6 193 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 ZNF350Q9GZX5 532 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 TIAM2Q8IVF5 1701 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 SHISA7A6NL88 538 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 RGS9O75916 674 aaPredicted RBP17.33■□□□□ 0.36
CLIP2-201ENST00000223398 OSMP13725 252 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 GPR19Q15760 415 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 MICAQ29983 383 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 TSSK4Q6SA08 328 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 GRAMD2AQ8IUY3 354 aa17.33■□□□□ 0.36
CLIP2-201ENST00000223398 TVP23AA6NH52 213 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 OR6C70A6NIJ9 312 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 RBBP9O75884 186 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 IDUAP35475 653 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 ADPRHP54922 357 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 HSF5Q4G112 596 aaPredicted RBP17.32■□□□□ 0.36
CLIP2-201ENST00000223398 LCN8Q6JVE9 175 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 SLC35F2Q8IXU6 374 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 OR5AK2Q8NH90 309 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 ENKD1Q9H0I2 346 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 VIRMAQ69YN4 1812 aaKnown RBP17.32■□□□□ 0.36
CLIP2-201ENST00000223398 PHYHO14832 338 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 OR2T1O43869 369 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 HOXB9P17482 250 aaPredicted RBP17.32■□□□□ 0.36
CLIP2-201ENST00000223398 MAGEA6P43360 314 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 TRAM1Q15629 374 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 TUBA3EQ6PEY2 450 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 ZNF226Q9NYT6 803 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 H0YJX3 145 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 PCGF2P35227 344 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 RAB38P57729 211 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 PIGGQ5H8A4 983 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 ANKK1Q8NFD2 765 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 BTBD2Q9BX70 525 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 KATNBL1Q9H079 304 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 WBP1LQ9NX94 342 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 VSX1Q9NZR4 365 aaPredicted RBP17.32■□□□□ 0.36
CLIP2-201ENST00000223398 KLHL42Q9P2K6 505 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 EMCNQ9ULC0 261 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 ADAM18Q9Y3Q7 739 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 ZNF182P17025 639 aaPredicted RBP17.32■□□□□ 0.36
CLIP2-201ENST00000223398 PGFP49763 221 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 INHBCP55103 352 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms