RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 NMUR2Q9GZQ4 415 aa13.38□□□□□ -0.27
PCOLCE-201ENST00000223061 MED11Q9P086 117 aa13.38□□□□□ -0.27
PCOLCE-201ENST00000223061 ARMCX1Q9P291 453 aa13.38□□□□□ -0.27
PCOLCE-201ENST00000223061 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.38□□□□□ -0.27
PCOLCE-201ENST00000223061 MKLN1Q9UL63 735 aa13.38□□□□□ -0.27
PCOLCE-201ENST00000223061 SVILO95425 2214 aa13.38□□□□□ -0.27
PCOLCE-201ENST00000223061 EML6Q6ZMW3 1958 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 PRAMEF27A3QJZ7 478 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 NPIPA2E9PIF3 369 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 NPIPA3F8WFD2 350 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 CLIC1O00299 241 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 ZIC2O95409 532 aaPredicted RBP13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 HPNP05981 417 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 TPOP07202 933 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 HOXB9P17482 250 aaPredicted RBP13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 MVDP53602 400 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 HPCAP84074 193 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 C17orf67Q0P5P2 114 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 C3AR1Q16581 482 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 LRIF1Q5T3J3 769 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 FBXW10Q5XX13 1052 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 RETREG3Q86VR2 466 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 ANKFN1Q8N957 763 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 ZNF527Q8NB42 609 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 FAM83FQ8NEG4 500 aaPredicted RBP13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 OR2M3Q8NG83 312 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 OR14L1PQ8NHC6 308 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 ZNF350Q9GZX5 532 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 HOXD1Q9GZZ0 328 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 ACKR4Q9NPB9 350 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 MRGBPQ9NV56 204 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 VAPAQ9P0L0 249 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 SPRR3Q9UBC9 169 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 TINAGQ9UJW2 476 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 DKKL1Q9UK85 242 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 SLC6A5Q9Y345 797 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 WDR45Q9Y484 360 aa13.37□□□□□ -0.27
PCOLCE-201ENST00000223061 C15orf38-AP3S2A0A0A6YYH1 394 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 SUSD5O60279 629 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 HCN1O60741 890 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 SEMA7AO75326 666 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 H6PDO95479 791 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 STSP08842 583 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 NR2F1P10589 423 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 ENDOUP21128 410 aaKnown RBP13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 ATP12AP54707 1039 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 CASP6P55212 293 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 DSTNP60981 165 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 TXNL4AP83876 142 aaKnown RBP13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 CD226Q15762 336 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 SYPL1Q16563 259 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 ASRGL1Q7L266 308 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 HMGN2P46Q86SG4 172 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 DHDDSQ86SQ9 333 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 FADS6Q8N9I5 356 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 NEIL3Q8TAT5 605 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 SH3YL1Q96HL8 342 aaPredicted RBP13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 TAS2R10Q9NYW0 307 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 ZNF835Q9Y2P0 537 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 FLNCQ14315 2725 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 CENPVL1A0A0U1RR11 272 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 A0A1B0GVC2 190 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 NPIPB9F8W1W9 429 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 AQP7O14520 342 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 PRRG2O14669 202 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 LRRTM2O43300 516 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 HNRNPCL1O60812 293 aaKnown RBP13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 DPP4P27487 766 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 CHRNEQ04844 493 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 NFYCQ13952 458 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 KLHL26Q53HC5 615 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 PDZK1Q5T2W1 519 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 TYW3Q6IPR3 259 aaKnown RBP13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 DLEU7Q6UYE1 221 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 C3P1Q6ZMU1 363 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 FRRS1Q6ZNA5 592 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 CD163Q86VB7 1156 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 FJX1Q86VR8 437 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 SNX32Q86XE0 403 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 OR5M9Q8NGP3 310 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 FAM57AQ8TBR7 257 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 PHOSPHO1Q8TCT1 267 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 TSPEARQ8WU66 669 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 MYLK2Q9H1R3 596 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 ACAD8Q9UKU7 415 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 LIPT1Q9Y234 373 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 RPH3AQ9Y2J0 694 aaPredicted RBP13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 DTNAQ9Y4J8 743 aa13.36□□□□□ -0.27
PCOLCE-201ENST00000223061 NINQ8N4C6 2090 aa13.35□□□□□ -0.27
PCOLCE-201ENST00000223061 TRBV5-3A0A0A0MS03 114 aa13.35□□□□□ -0.27
PCOLCE-201ENST00000223061 LOC100653049A0A140TA62 436 aa13.35□□□□□ -0.27
PCOLCE-201ENST00000223061 A0A1W2PQD3 144 aa13.35□□□□□ -0.27
PCOLCE-201ENST00000223061 H3BNH8 94 aa13.35□□□□□ -0.27
PCOLCE-201ENST00000223061 KIAA0513O60268 411 aa13.35□□□□□ -0.27
PCOLCE-201ENST00000223061 MGRN1O60291 552 aa13.35□□□□□ -0.27
PCOLCE-201ENST00000223061 CCDC22O60826 627 aa13.35□□□□□ -0.27
PCOLCE-201ENST00000223061 TNFRSF21O75509 655 aa13.35□□□□□ -0.27
PCOLCE-201ENST00000223061 KRT34O76011 436 aa13.35□□□□□ -0.27
PCOLCE-201ENST00000223061 AGFG2O95081 481 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms