RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ACSBG1Q96GR2 724 aa11.94□□□□□ -0.5
PHGDH-215ENST00000641371 ZBTB3Q9H5J0 574 aa11.94□□□□□ -0.5
PHGDH-215ENST00000641371 ZBTB1Q9Y2K1 713 aa11.94□□□□□ -0.5
PHGDH-215ENST00000641371 BTAF1O14981 1849 aa11.94□□□□□ -0.5
PHGDH-215ENST00000641371 SBF2Q86WG5 1849 aa11.93□□□□□ -0.5
PHGDH-215ENST00000641371 EPB41L2O43491 1005 aaKnown RBP11.93□□□□□ -0.5
PHGDH-215ENST00000641371 PIP4K2AP48426 406 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-215ENST00000641371 DZIP3Q86Y13 1208 aaKnown RBP11.93□□□□□ -0.5
PHGDH-215ENST00000641371 ZBTB38Q8NAP3 1195 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-215ENST00000641371 KAZALD1Q96I82 304 aa11.93□□□□□ -0.5
PHGDH-215ENST00000641371 SLC4A9Q96Q91 983 aa11.93□□□□□ -0.5
PHGDH-215ENST00000641371 MYH3P11055 1940 aa11.92□□□□□ -0.5
PHGDH-215ENST00000641371 ATP5J2-PTCD1G3V325 749 aa11.92□□□□□ -0.5
PHGDH-215ENST00000641371 GLRX3O76003 335 aaKnown RBP11.92□□□□□ -0.5
PHGDH-215ENST00000641371 CRKLP46109 303 aaKnown RBP11.92□□□□□ -0.5
PHGDH-215ENST00000641371 CLEC4GQ6UXB4 293 aa11.92□□□□□ -0.5
PHGDH-215ENST00000641371 TICAM2Q86XR7 235 aa11.92□□□□□ -0.5
PHGDH-215ENST00000641371 TBC1D32Q96NH3 1257 aa11.92□□□□□ -0.5
PHGDH-215ENST00000641371 TUBGCP6Q96RT7 1819 aa11.92□□□□□ -0.5
PHGDH-215ENST00000641371 LY75O60449 1722 aa11.91□□□□□ -0.5
PHGDH-215ENST00000641371 APBB1O00213 710 aa11.91□□□□□ -0.5
PHGDH-215ENST00000641371 SMARCA5O60264 1052 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-215ENST00000641371 CIAO1O76071 339 aa11.91□□□□□ -0.5
PHGDH-215ENST00000641371 REC8O95072 547 aa11.91□□□□□ -0.5
PHGDH-215ENST00000641371 IFIT2P09913 472 aaKnown RBP11.91□□□□□ -0.5
PHGDH-215ENST00000641371 BECN1Q14457 450 aa11.91□□□□□ -0.5
PHGDH-215ENST00000641371 INTS5Q6P9B9 1019 aaKnown RBP11.91□□□□□ -0.5
PHGDH-215ENST00000641371 QTRT2Q9H974 415 aaKnown RBP11.91□□□□□ -0.5
PHGDH-215ENST00000641371 GPR108Q9NPR9 543 aa11.91□□□□□ -0.5
PHGDH-215ENST00000641371 DAXXQ9UER7 740 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-215ENST00000641371 ZNF330Q9Y3S2 320 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-215ENST00000641371 BCORQ6W2J9 1755 aa11.91□□□□□ -0.5
PHGDH-215ENST00000641371 AK9Q5TCS8 1911 aa11.91□□□□□ -0.5
PHGDH-215ENST00000641371 GSPT1P15170 499 aaKnown RBP11.9□□□□□ -0.5
PHGDH-215ENST00000641371 IL15P40933 162 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-215ENST00000641371 FAM196AQ6ZSG2 479 aa11.9□□□□□ -0.5
PHGDH-215ENST00000641371 NLRP10Q86W26 655 aa11.9□□□□□ -0.5
PHGDH-215ENST00000641371 SEPT12Q8IYM1 358 aa11.9□□□□□ -0.5
PHGDH-215ENST00000641371 CNTROBQ8N137 903 aa11.9□□□□□ -0.5
PHGDH-215ENST00000641371 MYH14Q7Z406 1995 aaKnown RBP11.89□□□□□ -0.51
PHGDH-215ENST00000641371 HIP1O00291 1037 aa11.89□□□□□ -0.51
PHGDH-215ENST00000641371 SDSP20132 328 aa11.89□□□□□ -0.51
PHGDH-215ENST00000641371 RFX5P48382 616 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-215ENST00000641371 RBM25P49756 843 aaKnown RBP11.89□□□□□ -0.51
PHGDH-215ENST00000641371 FOXO4P98177 505 aa11.89□□□□□ -0.51
PHGDH-215ENST00000641371 CCDC57Q2TAC2 916 aa11.89□□□□□ -0.51
PHGDH-215ENST00000641371 LMBR1LQ6UX01 489 aa11.89□□□□□ -0.51
PHGDH-215ENST00000641371 TBC1D9Q6ZT07 1266 aa11.89□□□□□ -0.51
PHGDH-215ENST00000641371 C16orf71Q8IYS4 520 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-215ENST00000641371 ZNF34Q8IZ26 560 aa11.89□□□□□ -0.51
PHGDH-215ENST00000641371 C22orf23Q9BZE7 217 aa11.89□□□□□ -0.51
PHGDH-215ENST00000641371 BCL11BQ9C0K0 894 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-215ENST00000641371 ECHDC1Q9NTX5 307 aa11.89□□□□□ -0.51
PHGDH-215ENST00000641371 LAMB2P55268 1798 aa11.88□□□□□ -0.51
PHGDH-215ENST00000641371 CSF1RP07333 972 aa11.88□□□□□ -0.51
PHGDH-215ENST00000641371 RBM6P78332 1123 aaKnown RBP11.88□□□□□ -0.51
PHGDH-215ENST00000641371 PTPN12Q05209 780 aaKnown RBP11.88□□□□□ -0.51
PHGDH-215ENST00000641371 ITPK1Q13572 414 aa11.88□□□□□ -0.51
PHGDH-215ENST00000641371 ERICH6Q7L0X2 663 aa11.88□□□□□ -0.51
PHGDH-215ENST00000641371 ARXQ96QS3 562 aa11.88□□□□□ -0.51
PHGDH-215ENST00000641371 IL1RAPL2Q9NP60 686 aa11.88□□□□□ -0.51
PHGDH-215ENST00000641371 SCN7AQ01118 1682 aa11.87□□□□□ -0.51
PHGDH-215ENST00000641371 KCNQ2O43526 872 aa11.87□□□□□ -0.51
PHGDH-215ENST00000641371 PDE8AO60658 829 aa11.87□□□□□ -0.51
PHGDH-215ENST00000641371 RPS6KA4O75676 772 aa11.87□□□□□ -0.51
PHGDH-215ENST00000641371 ADRA2BP18089 450 aa11.87□□□□□ -0.51
PHGDH-215ENST00000641371 MFAP1P55081 439 aaKnown RBP11.87□□□□□ -0.51
PHGDH-215ENST00000641371 EPHA10Q5JZY3 1008 aa11.87□□□□□ -0.51
PHGDH-215ENST00000641371 SLC27A3Q5K4L6 730 aa11.87□□□□□ -0.51
PHGDH-215ENST00000641371 AKAP2Q9Y2D5 859 aa11.87□□□□□ -0.51
PHGDH-215ENST00000641371 TAF1LQ8IZX4 1826 aa11.87□□□□□ -0.51
PHGDH-215ENST00000641371 SH3TC1Q8TE82 1336 aa11.86□□□□□ -0.51
PHGDH-215ENST00000641371 TRIM6-TRIM34B2RNG4 842 aa11.86□□□□□ -0.51
PHGDH-215ENST00000641371 EYA2O00167 538 aa11.86□□□□□ -0.51
PHGDH-215ENST00000641371 CAMTA2O94983 1202 aa11.86□□□□□ -0.51
PHGDH-215ENST00000641371 IFIT5Q13325 482 aaKnown RBP11.86□□□□□ -0.51
PHGDH-215ENST00000641371 TAF7LQ5H9L4 462 aa11.86□□□□□ -0.51
PHGDH-215ENST00000641371 KRT27Q7Z3Y8 459 aa11.86□□□□□ -0.51
PHGDH-215ENST00000641371 AACSQ86V21 672 aa11.86□□□□□ -0.51
PHGDH-215ENST00000641371 OTUD7AQ8TE49 926 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-215ENST00000641371 RUFY2Q8WXA3 655 aa11.86□□□□□ -0.51
PHGDH-215ENST00000641371 UTP14AQ9BVJ6 771 aaKnown RBP11.86□□□□□ -0.51
PHGDH-215ENST00000641371 TRMT112Q9UI30 125 aaKnown RBP11.86□□□□□ -0.51
PHGDH-215ENST00000641371 CCNL1Q9UK58 526 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-215ENST00000641371 PA2G4Q9UQ80 394 aaKnown RBP11.86□□□□□ -0.51
PHGDH-215ENST00000641371 CHMP3Q9Y3E7 222 aa11.86□□□□□ -0.51
PHGDH-215ENST00000641371 RFX7Q2KHR2 1363 aa11.86□□□□□ -0.51
PHGDH-215ENST00000641371 RTL9Q8NET4 1388 aa11.86□□□□□ -0.51
PHGDH-215ENST00000641371 IRS4O14654 1257 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-215ENST00000641371 SASH1O94885 1247 aa11.85□□□□□ -0.51
PHGDH-215ENST00000641371 SEC24BO95487 1268 aa11.85□□□□□ -0.51
PHGDH-215ENST00000641371 MCCP23508 829 aa11.85□□□□□ -0.51
PHGDH-215ENST00000641371 CTSWP56202 376 aa11.85□□□□□ -0.51
PHGDH-215ENST00000641371 HLFQ16534 295 aa11.85□□□□□ -0.51
PHGDH-215ENST00000641371 PI4K2BQ8TCG2 481 aa11.85□□□□□ -0.51
PHGDH-215ENST00000641371 EVI5LQ96CN4 794 aa11.85□□□□□ -0.51
PHGDH-215ENST00000641371 NYXQ9GZU5 481 aa11.85□□□□□ -0.51
PHGDH-215ENST00000641371 TBC1D2BQ9UPU7 963 aa11.85□□□□□ -0.51
PHGDH-215ENST00000641371 RTCBQ9Y3I0 505 aaKnown RBP11.85□□□□□ -0.51
PHGDH-215ENST00000641371 SPEF2Q9C093 1822 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms