RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 TTC21BQ7Z4L5 1316 aa16.22■□□□□ 0.19
SCARB2-227ENST00000640957 BIN1O00499 593 aa16.22■□□□□ 0.19
SCARB2-227ENST00000640957 PDIA4P13667 645 aaKnown RBP16.22■□□□□ 0.19
SCARB2-227ENST00000640957 ATP8B2P98198 1209 aa16.22■□□□□ 0.19
SCARB2-227ENST00000640957 PGBD1Q96JS3 809 aa16.22■□□□□ 0.19
SCARB2-227ENST00000640957 CHGBP05060 677 aa16.21■□□□□ 0.19
SCARB2-227ENST00000640957 HOMER1Q86YM7 354 aa16.21■□□□□ 0.19
SCARB2-227ENST00000640957 SOS1Q07889 1333 aaPredicted RBP16.21■□□□□ 0.19
SCARB2-227ENST00000640957 SALL3Q9BXA9 1300 aa16.21■□□□□ 0.19
SCARB2-227ENST00000640957 ST5P78524 1137 aa16.21■□□□□ 0.19
SCARB2-227ENST00000640957 ARHGAP29Q52LW3 1261 aa16.21■□□□□ 0.19
SCARB2-227ENST00000640957 NBPF7P0C2Y1 421 aaPredicted RBP16.21■□□□□ 0.19
SCARB2-227ENST00000640957 HSP90AA4PQ58FG1 418 aa16.21■□□□□ 0.19
SCARB2-227ENST00000640957 TAF3Q5VWG9 929 aa16.21■□□□□ 0.19
SCARB2-227ENST00000640957 RHPN1Q8TCX5 695 aa16.21■□□□□ 0.19
SCARB2-227ENST00000640957 KIAA1210Q9ULL0 1709 aa16.21■□□□□ 0.18
SCARB2-227ENST00000640957 TRIM66O15016 1216 aa16.2■□□□□ 0.18
SCARB2-227ENST00000640957 CCT4P50991 539 aaKnown RBP16.2■□□□□ 0.18
SCARB2-227ENST00000640957 PLA2G4DQ86XP0 818 aa16.2■□□□□ 0.18
SCARB2-227ENST00000640957 C10orf67Q8IYJ2 551 aa16.2■□□□□ 0.18
SCARB2-227ENST00000640957 ANKRD65E5RJM6 399 aa16.2■□□□□ 0.18
SCARB2-227ENST00000640957 HAP1P54257 671 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-227ENST00000640957 LEO1Q8WVC0 666 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-227ENST00000640957 USP44Q9H0E7 712 aa16.2■□□□□ 0.18
SCARB2-227ENST00000640957 SIL1Q9H173 461 aa16.2■□□□□ 0.18
SCARB2-227ENST00000640957 NEXMIFQ5QGS0 1516 aa16.2■□□□□ 0.18
SCARB2-227ENST00000640957 SETBP1Q9Y6X0 1596 aa16.2■□□□□ 0.18
SCARB2-227ENST00000640957 CCAR2Q8N163 923 aaKnown RBP16.2■□□□□ 0.18
SCARB2-227ENST00000640957 EDC3Q96F86 508 aaKnown RBP16.19■□□□□ 0.18
SCARB2-227ENST00000640957 ZSWIM4Q9H7M6 989 aa16.19■□□□□ 0.18
SCARB2-227ENST00000640957 SMC2O95347 1197 aa16.19■□□□□ 0.18
SCARB2-227ENST00000640957 CLCN6P51797 869 aa16.19■□□□□ 0.18
SCARB2-227ENST00000640957 PI4K2BQ8TCG2 481 aa16.19■□□□□ 0.18
SCARB2-227ENST00000640957 GNL2Q13823 731 aaKnown RBP16.18■□□□□ 0.18
SCARB2-227ENST00000640957 CNTROBQ8N137 903 aa16.18■□□□□ 0.18
SCARB2-227ENST00000640957 AOPEPQ8N6M6 819 aa16.18■□□□□ 0.18
SCARB2-227ENST00000640957 PTPRCP08575 1304 aa16.18■□□□□ 0.18
SCARB2-227ENST00000640957 NEO1Q92859 1461 aa16.18■□□□□ 0.18
SCARB2-227ENST00000640957 PTPRMP28827 1452 aa16.18■□□□□ 0.18
SCARB2-227ENST00000640957 CD163L1Q9NR16 1453 aa16.18■□□□□ 0.18
SCARB2-227ENST00000640957 SLU7O95391 586 aaKnown RBP16.18■□□□□ 0.18
SCARB2-227ENST00000640957 HSP90B1P14625 803 aaKnown RBP16.18■□□□□ 0.18
SCARB2-227ENST00000640957 LMTK2Q8IWU2 1503 aa16.17■□□□□ 0.18
SCARB2-227ENST00000640957 CCDC8Q9H0W5 538 aaPredicted RBP16.17■□□□□ 0.18
SCARB2-227ENST00000640957 RBM8AQ9Y5S9 174 aaKnown RBP16.17■□□□□ 0.18
SCARB2-227ENST00000640957 DIP2CQ9Y2E4 1556 aa16.17■□□□□ 0.18
SCARB2-227ENST00000640957 SIGLEC1Q9BZZ2 1709 aa16.17■□□□□ 0.18
SCARB2-227ENST00000640957 MAP3K19Q56UN5 1328 aa16.17■□□□□ 0.18
SCARB2-227ENST00000640957 H3BQV1 296 aa16.17■□□□□ 0.18
SCARB2-227ENST00000640957 IFFO2Q5TF58 517 aa16.17■□□□□ 0.18
SCARB2-227ENST00000640957 ERBB3P21860 1342 aa16.16■□□□□ 0.18
SCARB2-227ENST00000640957 GNAI3P08754 354 aa16.16■□□□□ 0.18
SCARB2-227ENST00000640957 RAD51AP2Q09MP3 1159 aa16.16■□□□□ 0.18
SCARB2-227ENST00000640957 SNW1Q13573 536 aaKnown RBP16.16■□□□□ 0.18
SCARB2-227ENST00000640957 DNAI1Q9UI46 699 aa16.16■□□□□ 0.18
SCARB2-227ENST00000640957 LCMT1Q9UIC8 334 aa16.16■□□□□ 0.18
SCARB2-227ENST00000640957 PPLO60437 1756 aa16.16■□□□□ 0.18
SCARB2-227ENST00000640957 KRBA2Q6ZNG9 492 aa16.16■□□□□ 0.18
SCARB2-227ENST00000640957 CALCOCO1Q9P1Z2 691 aa16.16■□□□□ 0.18
SCARB2-227ENST00000640957 ROBO2Q9HCK4 1378 aa16.16■□□□□ 0.18
SCARB2-227ENST00000640957 TMC6Q7Z403 805 aa16.15■□□□□ 0.18
SCARB2-227ENST00000640957 EYA1Q99502 592 aa16.15■□□□□ 0.18
SCARB2-227ENST00000640957 CLSTN2Q9H4D0 955 aa16.15■□□□□ 0.18
SCARB2-227ENST00000640957 PIK3C2BO00750 1634 aa16.15■□□□□ 0.18
SCARB2-227ENST00000640957 ZFYVE9O95405 1425 aa16.15■□□□□ 0.18
SCARB2-227ENST00000640957 ZKSCAN1P17029 563 aaPredicted RBP16.15■□□□□ 0.18
SCARB2-227ENST00000640957 BRF1Q92994 677 aa16.15■□□□□ 0.18
SCARB2-227ENST00000640957 BOLA2Q9H3K6 86 aa16.15■□□□□ 0.18
SCARB2-227ENST00000640957 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.15■□□□□ 0.18
SCARB2-227ENST00000640957 URI1O94763 535 aaPredicted RBP16.14■□□□□ 0.18
SCARB2-227ENST00000640957 ESCO1Q5FWF5 840 aa16.14■□□□□ 0.18
SCARB2-227ENST00000640957 CCZ1BP86790 482 aa16.14■□□□□ 0.17
SCARB2-227ENST00000640957 CCZ1P86791 482 aaPredicted RBP16.14■□□□□ 0.17
SCARB2-227ENST00000640957 HDGFL1Q5TGJ6 251 aa16.14■□□□□ 0.17
SCARB2-227ENST00000640957 SEC62Q99442 399 aaKnown RBP16.14■□□□□ 0.17
SCARB2-227ENST00000640957 RSPH14Q9UHP6 348 aa16.14■□□□□ 0.17
SCARB2-227ENST00000640957 PNMA6AP0CW24 399 aaPredicted RBP16.14■□□□□ 0.17
SCARB2-227ENST00000640957 PLA2G4AP47712 749 aa16.14■□□□□ 0.17
SCARB2-227ENST00000640957 CREB3L3Q68CJ9 461 aa16.14■□□□□ 0.17
SCARB2-227ENST00000640957 TDRD7Q8NHU6 1098 aaKnown RBP16.14■□□□□ 0.17
SCARB2-227ENST00000640957 SMARCE1Q969G3 411 aa16.14■□□□□ 0.17
SCARB2-227ENST00000640957 ERO1AQ96HE7 468 aa16.14■□□□□ 0.17
SCARB2-227ENST00000640957 FHOD1Q9Y613 1164 aa16.14■□□□□ 0.17
SCARB2-227ENST00000640957 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
SCARB2-227ENST00000640957 TAF7Q15545 349 aaPredicted RBP16.13■□□□□ 0.17
SCARB2-227ENST00000640957 CCAR1Q8IX12 1150 aaKnown RBP16.13■□□□□ 0.17
SCARB2-227ENST00000640957 TOMM22Q9NS69 142 aa16.13■□□□□ 0.17
SCARB2-227ENST00000640957 STAP2Q9UGK3 403 aa16.13■□□□□ 0.17
SCARB2-227ENST00000640957 KIAA0232Q92628 1395 aa16.13■□□□□ 0.17
SCARB2-227ENST00000640957 TNRQ92752 1358 aa16.13■□□□□ 0.17
SCARB2-227ENST00000640957 STK11IPQ8N1F8 1099 aa16.13■□□□□ 0.17
SCARB2-227ENST00000640957 KLHDC4Q8TBB5 520 aa16.13■□□□□ 0.17
SCARB2-227ENST00000640957 DNAJC2Q99543 621 aaKnown RBP16.13■□□□□ 0.17
SCARB2-227ENST00000640957 FEZ2Q9UHY8 353 aaPredicted RBP16.13■□□□□ 0.17
SCARB2-227ENST00000640957 CCT2P78371 535 aaKnown RBP16.13■□□□□ 0.17
SCARB2-227ENST00000640957 RAB11FIP4Q86YS3 637 aa16.13■□□□□ 0.17
SCARB2-227ENST00000640957 GOLPH3LQ9H4A5 285 aa16.13■□□□□ 0.17
SCARB2-227ENST00000640957 ALKQ9UM73 1620 aa16.13■□□□□ 0.17
SCARB2-227ENST00000640957 KCNA6P17658 529 aa16.12■□□□□ 0.17
SCARB2-227ENST00000640957 EDC4Q6P2E9 1401 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms