RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 CBX8Q9HC52 389 aa16.27■□□□□ 0.19
PAX6-280ENST00000640872 MARF1Q9Y4F3 1742 aaKnown RBP16.26■□□□□ 0.19
PAX6-280ENST00000640872 CAMK4Q16566 473 aa16.26■□□□□ 0.19
PAX6-280ENST00000640872 CREB3L3Q68CJ9 461 aa16.26■□□□□ 0.19
PAX6-280ENST00000640872 C14orf37Q86TY3 774 aa16.26■□□□□ 0.19
PAX6-280ENST00000640872 CLASRPQ8N2M8 674 aaKnown RBP16.26■□□□□ 0.19
PAX6-280ENST00000640872 RBM8AQ9Y5S9 174 aaKnown RBP16.26■□□□□ 0.19
PAX6-280ENST00000640872 CEMIPQ8WUJ3 1361 aa16.26■□□□□ 0.19
PAX6-280ENST00000640872 PI4KAP2A4QPH2 592 aa16.26■□□□□ 0.19
PAX6-280ENST00000640872 ZKSCAN1P17029 563 aaPredicted RBP16.26■□□□□ 0.19
PAX6-280ENST00000640872 FAM173BQ6P4H8 233 aa16.26■□□□□ 0.19
PAX6-280ENST00000640872 FERMT3Q86UX7 667 aa16.26■□□□□ 0.19
PAX6-280ENST00000640872 PLA2G4DQ86XP0 818 aa16.26■□□□□ 0.19
PAX6-280ENST00000640872 PI4KAP1Q8N8J0 262 aa16.26■□□□□ 0.19
PAX6-280ENST00000640872 DDX54Q8TDD1 881 aaKnown RBP16.26■□□□□ 0.19
PAX6-280ENST00000640872 LTV1Q96GA3 475 aaPredicted RBP16.26■□□□□ 0.19
PAX6-280ENST00000640872 KDM3BQ7LBC6 1761 aa16.25■□□□□ 0.19
PAX6-280ENST00000640872 U2AF2P26368 475 aaKnown RBP eCLIP16.25■□□□□ 0.19
PAX6-280ENST00000640872 OS9Q13438 667 aaPredicted RBP16.25■□□□□ 0.19
PAX6-280ENST00000640872 SYCP1Q15431 976 aa16.25■□□□□ 0.19
PAX6-280ENST00000640872 CCDC186Q7Z3E2 898 aa16.25■□□□□ 0.19
PAX6-280ENST00000640872 MAP4K1Q92918 833 aa16.25■□□□□ 0.19
PAX6-280ENST00000640872 EVI5LQ96CN4 794 aa16.25■□□□□ 0.19
PAX6-280ENST00000640872 TNMDQ9H2S6 317 aa16.25■□□□□ 0.19
PAX6-280ENST00000640872 CHPF2Q9P2E5 772 aa16.25■□□□□ 0.19
PAX6-280ENST00000640872 ADCY9O60503 1353 aa16.25■□□□□ 0.19
PAX6-280ENST00000640872 SPDYE4A6NLX3 237 aa16.24■□□□□ 0.19
PAX6-280ENST00000640872 HOXB7P09629 217 aa16.24■□□□□ 0.19
PAX6-280ENST00000640872 EIF2S2P20042 333 aaKnown RBP16.24■□□□□ 0.19
PAX6-280ENST00000640872 PDCP20941 246 aa16.24■□□□□ 0.19
PAX6-280ENST00000640872 EIF4A1P60842 406 aaKnown RBP16.24■□□□□ 0.19
PAX6-280ENST00000640872 NCBP1Q09161 790 aaKnown RBP16.24■□□□□ 0.19
PAX6-280ENST00000640872 COL9A3Q14050 684 aaPredicted RBP16.24■□□□□ 0.19
PAX6-280ENST00000640872 ANO6Q4KMQ2 910 aa16.24■□□□□ 0.19
PAX6-280ENST00000640872 TDRD7Q8NHU6 1098 aaKnown RBP16.24■□□□□ 0.19
PAX6-280ENST00000640872 SNRKQ9NRH2 765 aa16.24■□□□□ 0.19
PAX6-280ENST00000640872 DACT1Q9NYF0 836 aa16.24■□□□□ 0.19
PAX6-280ENST00000640872 CHMP3Q9Y3E7 222 aa16.24■□□□□ 0.19
PAX6-280ENST00000640872 ZNF75DP51815 510 aa16.24■□□□□ 0.19
PAX6-280ENST00000640872 LRMPQ12912 555 aa16.24■□□□□ 0.19
PAX6-280ENST00000640872 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.24■□□□□ 0.19
PAX6-280ENST00000640872 CKAP2LQ8IYA6 745 aa16.24■□□□□ 0.19
PAX6-280ENST00000640872 DDX19AQ9NUU7 478 aaKnown RBP16.24■□□□□ 0.19
PAX6-280ENST00000640872 NPHP3Q7Z494 1330 aa16.24■□□□□ 0.19
PAX6-280ENST00000640872 GPATCH3Q96I76 525 aa16.23■□□□□ 0.19
PAX6-280ENST00000640872 SCAND2PQ9GZW5 306 aaPredicted RBP16.23■□□□□ 0.19
PAX6-280ENST00000640872 CLSTN2Q9H4D0 955 aa16.23■□□□□ 0.19
PAX6-280ENST00000640872 SMTNL1A8MU46 457 aa16.23■□□□□ 0.19
PAX6-280ENST00000640872 SLC27A2O14975 620 aa16.23■□□□□ 0.19
PAX6-280ENST00000640872 ZSCAN25Q6NSZ9 544 aa16.23■□□□□ 0.19
PAX6-280ENST00000640872 FEZ1Q99689 392 aa16.23■□□□□ 0.19
PAX6-280ENST00000640872 NRBP1Q9UHY1 535 aa16.23■□□□□ 0.19
PAX6-280ENST00000640872 USP54Q70EL1 1684 aa16.23■□□□□ 0.19
PAX6-280ENST00000640872 NPHP4O75161 1426 aaPredicted RBP16.23■□□□□ 0.19
PAX6-280ENST00000640872 ANKARQ7Z5J8 1434 aa16.23■□□□□ 0.19
PAX6-280ENST00000640872 KIF20AO95235 890 aa16.22■□□□□ 0.19
PAX6-280ENST00000640872 PSMA5P28066 241 aa16.22■□□□□ 0.19
PAX6-280ENST00000640872 ALDH8A1Q9H2A2 487 aaPredicted RBP16.22■□□□□ 0.19
PAX6-280ENST00000640872 PHF8Q9UPP1 1060 aa16.22■□□□□ 0.19
PAX6-280ENST00000640872 IFIT2P09913 472 aaKnown RBP16.22■□□□□ 0.19
PAX6-280ENST00000640872 NMIQ13287 307 aaPredicted RBP16.22■□□□□ 0.19
PAX6-280ENST00000640872 ERC1Q8IUD2 1116 aa16.22■□□□□ 0.19
PAX6-280ENST00000640872 USHBP1Q8N6Y0 703 aa16.22■□□□□ 0.19
PAX6-280ENST00000640872 LEO1Q8WVC0 666 aaPredicted RBP16.22■□□□□ 0.19
PAX6-280ENST00000640872 SPATA32Q96LK8 384 aa16.22■□□□□ 0.19
PAX6-280ENST00000640872 FAM227BQ96M60 508 aa16.22■□□□□ 0.19
PAX6-280ENST00000640872 ESCO1Q5FWF5 840 aa16.21■□□□□ 0.19
PAX6-280ENST00000640872 C16orf45Q96MC5 204 aaPredicted RBP16.21■□□□□ 0.19
PAX6-280ENST00000640872 HIP1O00291 1037 aa16.21■□□□□ 0.19
PAX6-280ENST00000640872 ANKRD1Q15327 319 aa16.21■□□□□ 0.19
PAX6-280ENST00000640872 LARP1Q6PKG0 1096 aaKnown RBP16.21■□□□□ 0.19
PAX6-280ENST00000640872 TRIM5Q9C035 493 aa16.21■□□□□ 0.19
PAX6-280ENST00000640872 KDM4FA0A1W2PPD8 638 aa16.2■□□□□ 0.18
PAX6-280ENST00000640872 RPS6KB1P23443 525 aa16.2■□□□□ 0.18
PAX6-280ENST00000640872 KCNJ4P48050 445 aa16.2■□□□□ 0.18
PAX6-280ENST00000640872 TOB2Q14106 344 aaPredicted RBP16.2■□□□□ 0.18
PAX6-280ENST00000640872 PA2G4Q9UQ80 394 aaKnown RBP16.2■□□□□ 0.18
PAX6-280ENST00000640872 JCADQ9P266 1359 aa16.2■□□□□ 0.18
PAX6-280ENST00000640872 GOLGA6L4A6NEF3 574 aa16.2■□□□□ 0.18
PAX6-280ENST00000640872 BLOC1S2Q6QNY1 142 aa16.2■□□□□ 0.18
PAX6-280ENST00000640872 AACSQ86V21 672 aa16.2■□□□□ 0.18
PAX6-280ENST00000640872 DRC7Q8IY82 874 aa16.2■□□□□ 0.18
PAX6-280ENST00000640872 TFIP11Q9UBB9 837 aaKnown RBP16.2■□□□□ 0.18
PAX6-280ENST00000640872 MED23Q9ULK4 1368 aa16.19■□□□□ 0.18
PAX6-280ENST00000640872 ANXA1P04083 346 aa16.19■□□□□ 0.18
PAX6-280ENST00000640872 TNNT1P13805 278 aa16.19■□□□□ 0.18
PAX6-280ENST00000640872 PGBD1Q96JS3 809 aa16.19■□□□□ 0.18
PAX6-280ENST00000640872 ORAI2Q96SN7 254 aa16.19■□□□□ 0.18
PAX6-280ENST00000640872 CHMP4AQ9BY43 222 aa16.19■□□□□ 0.18
PAX6-280ENST00000640872 NR1I2O75469 434 aa16.19■□□□□ 0.18
PAX6-280ENST00000640872 CDC25BP30305 580 aa16.19■□□□□ 0.18
PAX6-280ENST00000640872 CACTINQ8WUQ7 758 aaKnown RBP16.19■□□□□ 0.18
PAX6-280ENST00000640872 TCEANC2Q96MN5 208 aa16.19■□□□□ 0.18
PAX6-280ENST00000640872 OGFRQ9NZT2 677 aa16.19■□□□□ 0.18
PAX6-280ENST00000640872 CTNNA3Q9UI47 895 aa16.19■□□□□ 0.18
PAX6-280ENST00000640872 PAXBP1Q9Y5B6 917 aa16.19■□□□□ 0.18
PAX6-280ENST00000640872 TAF6LQ9Y6J9 622 aa16.19■□□□□ 0.18
PAX6-280ENST00000640872 A0A0D9SFI3 127 aa16.18■□□□□ 0.18
PAX6-280ENST00000640872 KCNQ3O43525 872 aa16.18■□□□□ 0.18
PAX6-280ENST00000640872 ALDH1L1O75891 902 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms