RNA–Protein interactions for RNA: ENST00000640728.1

SPIN3-244, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,954 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-244ENST00000640728 TBC1D9Q6ZT07 1266 aa26.26■■□□□ 1.79
SPIN3-244ENST00000640728 COPRSQ9NQ92 184 aa26.26■■□□□ 1.79
SPIN3-244ENST00000640728 TBC1D2BQ9UPU7 963 aa26.25■■□□□ 1.79
SPIN3-244ENST00000640728 AOX1Q06278 1338 aa26.25■■□□□ 1.79
SPIN3-244ENST00000640728 RTL5Q5HYW3 569 aaPredicted RBP26.24■■□□□ 1.79
SPIN3-244ENST00000640728 LMBR1LQ6UX01 489 aa26.24■■□□□ 1.79
SPIN3-244ENST00000640728 NUTM1Q86Y26 1132 aa26.24■■□□□ 1.79
SPIN3-244ENST00000640728 PCCAP05165 728 aaPredicted RBP26.24■■□□□ 1.79
SPIN3-244ENST00000640728 TBC1D32Q96NH3 1257 aa26.24■■□□□ 1.79
SPIN3-244ENST00000640728 SASH1O94885 1247 aa26.23■■□□□ 1.79
SPIN3-244ENST00000640728 MFAP1P55081 439 aaKnown RBP26.23■■□□□ 1.79
SPIN3-244ENST00000640728 PTPN12Q05209 780 aaKnown RBP26.23■■□□□ 1.79
SPIN3-244ENST00000640728 TSHZ3Q63HK5 1081 aa26.23■■□□□ 1.79
SPIN3-244ENST00000640728 KLHDC4Q8TBB5 520 aa26.23■■□□□ 1.79
SPIN3-244ENST00000640728 NLRP10Q86W26 655 aa26.22■■□□□ 1.79
SPIN3-244ENST00000640728 CLASRPQ8N2M8 674 aaKnown RBP26.22■■□□□ 1.79
SPIN3-244ENST00000640728 ZBTB38Q8NAP3 1195 aaPredicted RBP26.22■■□□□ 1.79
SPIN3-244ENST00000640728 RREB1Q92766 1687 aa26.21■■□□□ 1.79
SPIN3-244ENST00000640728 ZNF831Q5JPB2 1677 aa26.21■■□□□ 1.79
SPIN3-244ENST00000640728 LINC00116Q8NCU8 138 aa26.2■■□□□ 1.79
SPIN3-244ENST00000640728 SIL1Q9H173 461 aa26.2■■□□□ 1.79
SPIN3-244ENST00000640728 GPTP24298 496 aa26.2■■□□□ 1.78
SPIN3-244ENST00000640728 DDRGK1Q96HY6 314 aa26.2■■□□□ 1.78
SPIN3-244ENST00000640728 ZNF34Q8IZ26 560 aa26.19■■□□□ 1.78
SPIN3-244ENST00000640728 PLA2G12BQ9BX93 195 aa26.19■■□□□ 1.78
SPIN3-244ENST00000640728 USP42Q9H9J4 1324 aaKnown RBP26.19■■□□□ 1.78
SPIN3-244ENST00000640728 FAM89AQ96GI7 184 aa26.18■■□□□ 1.78
SPIN3-244ENST00000640728 C22orf23Q9BZE7 217 aa26.18■■□□□ 1.78
SPIN3-244ENST00000640728 NHSQ6T4R5 1651 aa26.18■■□□□ 1.78
SPIN3-244ENST00000640728 CAMTA2O94983 1202 aa26.17■■□□□ 1.78
SPIN3-244ENST00000640728 PI4K2BQ8TCG2 481 aa26.17■■□□□ 1.78
SPIN3-244ENST00000640728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.17■■□□□ 1.78
SPIN3-244ENST00000640728 CDHR2Q9BYE9 1310 aa26.17■■□□□ 1.78
SPIN3-244ENST00000640728 MYH14Q7Z406 1995 aaKnown RBP26.16■■□□□ 1.78
SPIN3-244ENST00000640728 CNTNAP4Q9C0A0 1308 aa26.16■■□□□ 1.78
SPIN3-244ENST00000640728 KCNQ4P56696 695 aa26.16■■□□□ 1.78
SPIN3-244ENST00000640728 CHMP3Q9Y3E7 222 aa26.16■■□□□ 1.78
SPIN3-244ENST00000640728 TTC41PQ6P2S7 1318 aa26.15■■□□□ 1.78
SPIN3-244ENST00000640728 EAF2Q96CJ1 260 aaPredicted RBP26.15■■□□□ 1.78
SPIN3-244ENST00000640728 EIF5BO60841 1220 aaKnown RBP26.15■■□□□ 1.78
SPIN3-244ENST00000640728 IFIT2P09913 472 aaKnown RBP26.15■■□□□ 1.78
SPIN3-244ENST00000640728 AACSQ86V21 672 aa26.15■■□□□ 1.78
SPIN3-244ENST00000640728 UBN2Q6ZU65 1347 aa26.14■■□□□ 1.78
SPIN3-244ENST00000640728 COL5A3P25940 1745 aaPredicted RBP26.14■■□□□ 1.77
SPIN3-244ENST00000640728 BTAF1O14981 1849 aa26.14■■□□□ 1.77
SPIN3-244ENST00000640728 CSF1RP07333 972 aa26.13■■□□□ 1.77
SPIN3-244ENST00000640728 RC3H1Q5TC82 1133 aaKnown RBP26.13■■□□□ 1.77
SPIN3-244ENST00000640728 CASC1Q6TDU7 716 aa26.13■■□□□ 1.77
SPIN3-244ENST00000640728 SYNE4Q8N205 404 aa26.13■■□□□ 1.77
SPIN3-244ENST00000640728 TRMT112Q9UI30 125 aaKnown RBP26.13■■□□□ 1.77
SPIN3-244ENST00000640728 BCL11BQ9C0K0 894 aaPredicted RBP26.12■■□□□ 1.77
SPIN3-244ENST00000640728 ECHDC1Q9NTX5 307 aa26.12■■□□□ 1.77
SPIN3-244ENST00000640728 CCNL1Q9UK58 526 aaPredicted RBP26.11■■□□□ 1.77
SPIN3-244ENST00000640728 NUP98P52948 1817 aa26.11■■□□□ 1.77
SPIN3-244ENST00000640728 TRIM6-TRIM34B2RNG4 842 aa26.11■■□□□ 1.77
SPIN3-244ENST00000640728 RBM25P49756 843 aaKnown RBP26.11■■□□□ 1.77
SPIN3-244ENST00000640728 ERC2O15083 957 aa26.1■■□□□ 1.77
SPIN3-244ENST00000640728 GLRX3O76003 335 aaKnown RBP26.1■■□□□ 1.77
SPIN3-244ENST00000640728 TFCP2Q12800 502 aa26.1■■□□□ 1.77
SPIN3-244ENST00000640728 GPATCH3Q96I76 525 aa26.1■■□□□ 1.77
SPIN3-244ENST00000640728 ATG9AQ7Z3C6 839 aa26.09■■□□□ 1.77
SPIN3-244ENST00000640728 RILPL2Q969X0 211 aa26.09■■□□□ 1.77
SPIN3-244ENST00000640728 CCDC8Q9H0W5 538 aaPredicted RBP26.09■■□□□ 1.77
SPIN3-244ENST00000640728 ANKRD36CQ5JPF3 1778 aa26.09■■□□□ 1.77
SPIN3-244ENST00000640728 IRS4O14654 1257 aaPredicted RBP26.09■■□□□ 1.77
SPIN3-244ENST00000640728 KRT27Q7Z3Y8 459 aa26.09■■□□□ 1.77
SPIN3-244ENST00000640728 CCDC57Q2TAC2 916 aa26.08■■□□□ 1.77
SPIN3-244ENST00000640728 PARP10Q53GL7 1025 aa26.08■■□□□ 1.77
SPIN3-244ENST00000640728 SUSD4Q5VX71 490 aa26.08■■□□□ 1.77
SPIN3-244ENST00000640728 ZNF772Q68DY9 489 aaPredicted RBP26.08■■□□□ 1.77
SPIN3-244ENST00000640728 CLEC4GQ6UXB4 293 aa26.08■■□□□ 1.77
SPIN3-244ENST00000640728 FAM196AQ6ZSG2 479 aa26.08■■□□□ 1.77
SPIN3-244ENST00000640728 EYA2O00167 538 aa26.07■■□□□ 1.76
SPIN3-244ENST00000640728 RPS6KA4O75676 772 aa26.07■■□□□ 1.76
SPIN3-244ENST00000640728 CIAO1O76071 339 aa26.07■■□□□ 1.76
SPIN3-244ENST00000640728 ZNF594Q96JF6 807 aaPredicted RBP26.07■■□□□ 1.76
SPIN3-244ENST00000640728 TUBGCP6Q96RT7 1819 aa26.07■■□□□ 1.76
SPIN3-244ENST00000640728 IL15P40933 162 aaPredicted RBP26.07■■□□□ 1.76
SPIN3-244ENST00000640728 TNNI3KQ59H18 835 aa26.07■■□□□ 1.76
SPIN3-244ENST00000640728 TTLL11Q8NHH1 800 aa26.07■■□□□ 1.76
SPIN3-244ENST00000640728 TLR7Q9NYK1 1049 aaKnown RBP26.07■■□□□ 1.76
SPIN3-244ENST00000640728 FPGT-TNNI3KV9GXZ4 949 aa26.07■■□□□ 1.76
SPIN3-244ENST00000640728 SBF2Q86WG5 1849 aa26.06■■□□□ 1.76
SPIN3-244ENST00000640728 RGL2O15211 777 aa26.06■■□□□ 1.76
SPIN3-244ENST00000640728 ZNF652Q9Y2D9 606 aa26.06■■□□□ 1.76
SPIN3-244ENST00000640728 PDE8AO60658 829 aa26.06■■□□□ 1.76
SPIN3-244ENST00000640728 CHMLP26374 656 aa26.06■■□□□ 1.76
SPIN3-244ENST00000640728 CTSWP56202 376 aa26.06■■□□□ 1.76
SPIN3-244ENST00000640728 RBM6P78332 1123 aaKnown RBP26.06■■□□□ 1.76
SPIN3-244ENST00000640728 UTP14AQ9BVJ6 771 aaKnown RBP26.06■■□□□ 1.76
SPIN3-244ENST00000640728 FBXO3Q9UK99 471 aa26.06■■□□□ 1.76
SPIN3-244ENST00000640728 AK7Q96M32 723 aa26.05■■□□□ 1.76
SPIN3-244ENST00000640728 NIP7Q9Y221 180 aaKnown RBP eCLIP26.05■■□□□ 1.76
SPIN3-244ENST00000640728 IFIT5Q13325 482 aaKnown RBP26.04■■□□□ 1.76
SPIN3-244ENST00000640728 LRRC24Q50LG9 513 aa26.04■■□□□ 1.76
SPIN3-244ENST00000640728 SH3TC1Q8TE82 1336 aa26.04■■□□□ 1.76
SPIN3-244ENST00000640728 MAP4K4O95819 1239 aaPredicted RBP26.04■■□□□ 1.76
SPIN3-244ENST00000640728 CNTROBQ8N137 903 aa26.04■■□□□ 1.76
SPIN3-244ENST00000640728 CCDC85AQ96PX6 553 aaPredicted RBP26.04■■□□□ 1.76
SPIN3-244ENST00000640728 GPR108Q9NPR9 543 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms