RNA–Protein interactions for RNA: ENST00000638134.1

CLCN2-222, Transcript of chloride voltage-gated channel 2, human

TSL 5

Gene CLCN2, Length 2,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN2-222	ENST00000638134	CCDC171	Q6TFL3	1326 aa		18.59	■□□□□ 0.57
CLCN2-222	ENST00000638134	RAD51AP2	Q09MP3	1159 aa		18.58	■□□□□ 0.57
CLCN2-222	ENST00000638134	CEP135	Q66GS9	1140 aa		18.58	■□□□□ 0.57
CLCN2-222	ENST00000638134	NGLY1	Q96IV0	654 aa		18.58	■□□□□ 0.57
CLCN2-222	ENST00000638134	GEMIN8	Q9NWZ8	242 aa	Known RBP	18.58	■□□□□ 0.57
CLCN2-222	ENST00000638134	IGSF1	Q8N6C5	1336 aa		18.58	■□□□□ 0.56
CLCN2-222	ENST00000638134	EVA1C	P58658	441 aa		18.58	■□□□□ 0.56
CLCN2-222	ENST00000638134	MAPK8IP2	Q13387	824 aa	Predicted RBP	18.58	■□□□□ 0.56
CLCN2-222	ENST00000638134	MUM1L1	Q5H9M0	696 aa		18.58	■□□□□ 0.56
CLCN2-222	ENST00000638134	API5	Q9BZZ5	524 aa	Known RBP	18.58	■□□□□ 0.56
CLCN2-222	ENST00000638134	FBXO38	Q6PIJ6	1188 aa		18.57	■□□□□ 0.56
CLCN2-222	ENST00000638134	PRKAR2B	P31323	418 aa		18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	TPD52L1	Q16890	204 aa	Predicted RBP	18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	MEX3C	Q5U5Q3	659 aa	Known RBP	18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	ZSCAN25	Q6NSZ9	544 aa		18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	GIMAP6	Q6P9H5	292 aa		18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	CTR9	Q6PD62	1173 aa		18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	CCDC186	Q7Z3E2	898 aa		18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	CNPY2	Q9Y2B0	182 aa		18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	VAMP4	O75379	141 aa		18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	TOM1L2	Q6ZVM7	507 aa		18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	ANKRD44	Q8N8A2	993 aa		18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	PHACTR3	Q96KR7	559 aa		18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	WDR17	Q8IZU2	1322 aa		18.56	■□□□□ 0.56
CLCN2-222	ENST00000638134	ZSCAN22	P10073	491 aa	Predicted RBP	18.55	■□□□□ 0.56
CLCN2-222	ENST00000638134	OSBPL3	Q9H4L5	887 aa		18.55	■□□□□ 0.56
CLCN2-222	ENST00000638134	HTATSF1	O43719	755 aa	Known RBP	18.55	■□□□□ 0.56
CLCN2-222	ENST00000638134	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.55	■□□□□ 0.56
CLCN2-222	ENST00000638134	ZNF215	Q9UL58	517 aa	Predicted RBP	18.55	■□□□□ 0.56
CLCN2-222	ENST00000638134	ABCC6	O95255	1503 aa		18.55	■□□□□ 0.56
CLCN2-222	ENST00000638134	SLIT2	O94813	1529 aa		18.54	■□□□□ 0.56
CLCN2-222	ENST00000638134	TNNT3	P45378	269 aa	Predicted RBP	18.54	■□□□□ 0.56
CLCN2-222	ENST00000638134	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	18.54	■□□□□ 0.56
CLCN2-222	ENST00000638134	FOXD4L3	Q6VB84	417 aa	Predicted RBP	18.54	■□□□□ 0.56
CLCN2-222	ENST00000638134	TXLNB	Q8N3L3	684 aa		18.54	■□□□□ 0.56
CLCN2-222	ENST00000638134	TEX35	Q5T0J7	233 aa		18.53	■□□□□ 0.56
CLCN2-222	ENST00000638134	RASSF4	Q9H2L5	321 aa		18.53	■□□□□ 0.56
CLCN2-222	ENST00000638134	ATP10D	Q9P241	1426 aa		18.53	■□□□□ 0.56
CLCN2-222	ENST00000638134	EPB41L2	O43491	1005 aa	Known RBP	18.53	■□□□□ 0.56
CLCN2-222	ENST00000638134	NEMF	O60524	1076 aa		18.53	■□□□□ 0.56
CLCN2-222	ENST00000638134	PLA2G4D	Q86XP0	818 aa		18.53	■□□□□ 0.56
CLCN2-222	ENST00000638134	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.53	■□□□□ 0.56
CLCN2-222	ENST00000638134	FCHSD2	O94868	740 aa		18.52	■□□□□ 0.56
CLCN2-222	ENST00000638134	LRMP	Q12912	555 aa		18.52	■□□□□ 0.56
CLCN2-222	ENST00000638134	BCL9L	Q86UU0	1499 aa		18.52	■□□□□ 0.56
CLCN2-222	ENST00000638134	NRAP	Q86VF7	1730 aa		18.52	■□□□□ 0.56
CLCN2-222	ENST00000638134	KDR	P35968	1356 aa		18.52	■□□□□ 0.55
CLCN2-222	ENST00000638134	FAM208A	Q9UK61	1670 aa	Known RBP	18.51	■□□□□ 0.55
CLCN2-222	ENST00000638134	SLU7	O95391	586 aa	Known RBP	18.51	■□□□□ 0.55
CLCN2-222	ENST00000638134	H2AFX	P16104	143 aa	Predicted RBP	18.51	■□□□□ 0.55
CLCN2-222	ENST00000638134	CDC25B	P30305	580 aa		18.51	■□□□□ 0.55
CLCN2-222	ENST00000638134	MMP14	P50281	582 aa		18.51	■□□□□ 0.55
CLCN2-222	ENST00000638134	NYAP1	Q6ZVC0	841 aa		18.51	■□□□□ 0.55
CLCN2-222	ENST00000638134	DRC7	Q8IY82	874 aa		18.51	■□□□□ 0.55
CLCN2-222	ENST00000638134	ESYT1	Q9BSJ8	1104 aa		18.51	■□□□□ 0.55
CLCN2-222	ENST00000638134	ZNF446	Q9NWS9	450 aa		18.51	■□□□□ 0.55
CLCN2-222	ENST00000638134	AFF2	P51816	1311 aa		18.5	■□□□□ 0.55
CLCN2-222	ENST00000638134	KIF2A	O00139	706 aa	Predicted RBP	18.5	■□□□□ 0.55
CLCN2-222	ENST00000638134	ZNF75D	P51815	510 aa		18.5	■□□□□ 0.55
CLCN2-222	ENST00000638134	ELF2	Q15723	593 aa		18.5	■□□□□ 0.55
CLCN2-222	ENST00000638134	F13A1	P00488	732 aa		18.5	■□□□□ 0.55
CLCN2-222	ENST00000638134	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.5	■□□□□ 0.55
CLCN2-222	ENST00000638134	ST7	Q9NRC1	585 aa		18.5	■□□□□ 0.55
CLCN2-222	ENST00000638134	USP21	Q9UK80	565 aa		18.5	■□□□□ 0.55
CLCN2-222	ENST00000638134	TUBGCP6	Q96RT7	1819 aa		18.49	■□□□□ 0.55
CLCN2-222	ENST00000638134	PTPN14	Q15678	1187 aa		18.49	■□□□□ 0.55
CLCN2-222	ENST00000638134	ILDR1	Q86SU0	546 aa	Predicted RBP	18.49	■□□□□ 0.55
CLCN2-222	ENST00000638134	UNC5CL	Q8IV45	518 aa		18.49	■□□□□ 0.55
CLCN2-222	ENST00000638134	CCDC9	Q9Y3X0	531 aa	Known RBP	18.49	■□□□□ 0.55
CLCN2-222	ENST00000638134	STX6	O43752	255 aa		18.49	■□□□□ 0.55
CLCN2-222	ENST00000638134	NOP2	P46087	812 aa	Known RBP	18.49	■□□□□ 0.55
CLCN2-222	ENST00000638134	TPM4	P67936	248 aa		18.49	■□□□□ 0.55
CLCN2-222	ENST00000638134	KCND1	Q9NSA2	647 aa		18.49	■□□□□ 0.55
CLCN2-222	ENST00000638134	RSPH14	Q9UHP6	348 aa		18.49	■□□□□ 0.55
CLCN2-222	ENST00000638134	CRB1	P82279	1406 aa		18.48	■□□□□ 0.55
CLCN2-222	ENST00000638134	PTPRC	P08575	1304 aa		18.48	■□□□□ 0.55
CLCN2-222	ENST00000638134	MEGF6	O75095	1541 aa		18.48	■□□□□ 0.55
CLCN2-222	ENST00000638134	MAP3K11	Q16584	847 aa		18.48	■□□□□ 0.55
CLCN2-222	ENST00000638134	ZNF592	Q92610	1267 aa		18.48	■□□□□ 0.55
CLCN2-222	ENST00000638134	FHOD1	Q9Y613	1164 aa		18.48	■□□□□ 0.55
CLCN2-222	ENST00000638134	MRVI1	Q9Y6F6	885 aa		18.48	■□□□□ 0.55
CLCN2-222	ENST00000638134	NWD2	Q9ULI1	1742 aa		18.48	■□□□□ 0.55
CLCN2-222	ENST00000638134	NCAPD2	Q15021	1401 aa		18.48	■□□□□ 0.55
CLCN2-222	ENST00000638134	EP400	Q96L91	3159 aa		18.48	■□□□□ 0.55
CLCN2-222	ENST00000638134	RAD50	Q92878	1312 aa		18.48	■□□□□ 0.55
CLCN2-222	ENST00000638134	FIBP	O43427	364 aa		18.47	■□□□□ 0.55
CLCN2-222	ENST00000638134	CERS3	Q8IU89	383 aa		18.47	■□□□□ 0.55
CLCN2-222	ENST00000638134	TDRD7	Q8NHU6	1098 aa	Known RBP	18.47	■□□□□ 0.55
CLCN2-222	ENST00000638134	RTF1	Q92541	710 aa	Known RBP	18.47	■□□□□ 0.55
CLCN2-222	ENST00000638134	SECISBP2L	Q93073	1101 aa	Known RBP	18.47	■□□□□ 0.55
CLCN2-222	ENST00000638134	CARD10	Q9BWT7	1032 aa		18.47	■□□□□ 0.55
CLCN2-222	ENST00000638134	PALD1	Q9ULE6	856 aa		18.47	■□□□□ 0.55
CLCN2-222	ENST00000638134	TYRO3	Q06418	890 aa		18.47	■□□□□ 0.55
CLCN2-222	ENST00000638134	TRERF1	Q96PN7	1200 aa		18.47	■□□□□ 0.55
CLCN2-222	ENST00000638134	GNAI1	P63096	354 aa		18.46	■□□□□ 0.55
CLCN2-222	ENST00000638134	MTHFSD	Q2M296	383 aa	Known RBP	18.46	■□□□□ 0.55
CLCN2-222	ENST00000638134	CEP85	Q6P2H3	762 aa		18.46	■□□□□ 0.55
CLCN2-222	ENST00000638134	CACTIN	Q8WUQ7	758 aa	Known RBP	18.46	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms