RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 BECN1Q14457 450 aa15.02■□□□□ -0
CACNA1D-228ENST00000638120 SMARCC1Q92922 1105 aaPredicted RBP15.02■□□□□ -0
CACNA1D-228ENST00000638120 COL5A3P25940 1745 aaPredicted RBP15.02□□□□□ -0.01
CACNA1D-228ENST00000638120 AK9Q5TCS8 1911 aa15.02□□□□□ -0.01
CACNA1D-228ENST00000638120 SLC4A3P48751 1232 aa15.01□□□□□ -0.01
CACNA1D-228ENST00000638120 KLHDC4Q8TBB5 520 aa15.01□□□□□ -0.01
CACNA1D-228ENST00000638120 SIL1Q9H173 461 aa15.01□□□□□ -0.01
CACNA1D-228ENST00000638120 NUP98P52948 1817 aa15.01□□□□□ -0.01
CACNA1D-228ENST00000638120 HSP90AB3PQ58FF7 597 aa15.01□□□□□ -0.01
CACNA1D-228ENST00000638120 LMBR1LQ6UX01 489 aa15.01□□□□□ -0.01
CACNA1D-228ENST00000638120 NHSQ6T4R5 1651 aa15□□□□□ -0.01
CACNA1D-228ENST00000638120 TRIM6-TRIM34B2RNG4 842 aa15□□□□□ -0.01
CACNA1D-228ENST00000638120 KCNQ2O43526 872 aa15□□□□□ -0.01
CACNA1D-228ENST00000638120 IFIT2P09913 472 aaKnown RBP15□□□□□ -0.01
CACNA1D-228ENST00000638120 ATP6V1AP38606 617 aa15□□□□□ -0.01
CACNA1D-228ENST00000638120 MEX3CQ5U5Q3 659 aaKnown RBP15□□□□□ -0.01
CACNA1D-228ENST00000638120 GPATCH3Q96I76 525 aa15□□□□□ -0.01
CACNA1D-228ENST00000638120 ANP32EQ9BTT0 268 aa15□□□□□ -0.01
CACNA1D-228ENST00000638120 CCDC87Q9NVE4 849 aa15□□□□□ -0.01
CACNA1D-228ENST00000638120 ERVV-1B6SEH8 477 aa14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 GLRX3O76003 335 aaKnown RBP14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 PCCAP05165 728 aaPredicted RBP14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 EIF5P55010 431 aaKnown RBP14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 AACSQ86V21 672 aa14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 RILPL2Q969X0 211 aa14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 ECHDC1Q9NTX5 307 aa14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 ERC2O15083 957 aa14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 CRKLP46109 303 aaKnown RBP14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 MYT1Q01538 1121 aa14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 ITPK1Q13572 414 aa14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 HLFQ16534 295 aa14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 RTL5Q5HYW3 569 aaPredicted RBP14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 INTS5Q6P9B9 1019 aaKnown RBP14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 DZIP3Q86Y13 1208 aaKnown RBP14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 EAF2Q96CJ1 260 aaPredicted RBP14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 ARXQ96QS3 562 aa14.99□□□□□ -0.01
CACNA1D-228ENST00000638120 REC8O95072 547 aa14.98□□□□□ -0.01
CACNA1D-228ENST00000638120 ZBTB38Q8NAP3 1195 aaPredicted RBP14.98□□□□□ -0.01
CACNA1D-228ENST00000638120 USP26Q9BXU7 913 aa14.98□□□□□ -0.01
CACNA1D-228ENST00000638120 TBC1D2Q9BYX2 928 aa14.98□□□□□ -0.01
CACNA1D-228ENST00000638120 MYH14Q7Z406 1995 aaKnown RBP14.98□□□□□ -0.01
CACNA1D-228ENST00000638120 AFF2P51816 1311 aa14.98□□□□□ -0.01
CACNA1D-228ENST00000638120 ATRNO75882 1429 aa14.98□□□□□ -0.01
CACNA1D-228ENST00000638120 CHMLP26374 656 aa14.97□□□□□ -0.01
CACNA1D-228ENST00000638120 CNTROBQ8N137 903 aa14.97□□□□□ -0.01
CACNA1D-228ENST00000638120 KIF2CQ99661 725 aa14.97□□□□□ -0.01
CACNA1D-228ENST00000638120 PLA2G12BQ9BX93 195 aa14.97□□□□□ -0.01
CACNA1D-228ENST00000638120 CDHR2Q9BYE9 1310 aa14.97□□□□□ -0.01
CACNA1D-228ENST00000638120 BTAF1O14981 1849 aa14.97□□□□□ -0.01
CACNA1D-228ENST00000638120 NLRP10Q86W26 655 aa14.96□□□□□ -0.01
CACNA1D-228ENST00000638120 GJD4Q96KN9 370 aaPredicted RBP14.96□□□□□ -0.01
CACNA1D-228ENST00000638120 ESYT1Q9BSJ8 1104 aa14.96□□□□□ -0.01
CACNA1D-228ENST00000638120 CHMP3Q9Y3E7 222 aa14.96□□□□□ -0.01
CACNA1D-228ENST00000638120 TBC1D2BQ9UPU7 963 aa14.96□□□□□ -0.01
CACNA1D-228ENST00000638120 GPTP24298 496 aa14.95□□□□□ -0.02
CACNA1D-228ENST00000638120 BCORQ6W2J9 1755 aa14.95□□□□□ -0.02
CACNA1D-228ENST00000638120 MYH3P11055 1940 aa14.95□□□□□ -0.02
CACNA1D-228ENST00000638120 MAP4K4O95819 1239 aaPredicted RBP14.94□□□□□ -0.02
CACNA1D-228ENST00000638120 TFCP2Q12800 502 aa14.94□□□□□ -0.02
CACNA1D-228ENST00000638120 TNNI3KQ59H18 835 aa14.94□□□□□ -0.02
CACNA1D-228ENST00000638120 FAM89AQ96GI7 184 aa14.94□□□□□ -0.02
CACNA1D-228ENST00000638120 CCDC8Q9H0W5 538 aaPredicted RBP14.94□□□□□ -0.02
CACNA1D-228ENST00000638120 TLR7Q9NYK1 1049 aaKnown RBP14.94□□□□□ -0.02
CACNA1D-228ENST00000638120 FPGT-TNNI3KV9GXZ4 949 aa14.94□□□□□ -0.02
CACNA1D-228ENST00000638120 ATG9AQ7Z3C6 839 aa14.94□□□□□ -0.02
CACNA1D-228ENST00000638120 ZNF34Q8IZ26 560 aa14.94□□□□□ -0.02
CACNA1D-228ENST00000638120 SNX21Q969T3 373 aa14.94□□□□□ -0.02
CACNA1D-228ENST00000638120 TRPC5Q9UL62 973 aaPredicted RBP14.94□□□□□ -0.02
CACNA1D-228ENST00000638120 UBN2Q6ZU65 1347 aa14.93□□□□□ -0.02
CACNA1D-228ENST00000638120 ONECUT3O60422 494 aaPredicted RBP14.93□□□□□ -0.02
CACNA1D-228ENST00000638120 CIAO1O76071 339 aa14.93□□□□□ -0.02
CACNA1D-228ENST00000638120 CSF1RP07333 972 aa14.93□□□□□ -0.02
CACNA1D-228ENST00000638120 IL15P40933 162 aaPredicted RBP14.93□□□□□ -0.02
CACNA1D-228ENST00000638120 SBF2Q86WG5 1849 aa14.93□□□□□ -0.02
CACNA1D-228ENST00000638120 CAMTA2O94983 1202 aa14.92□□□□□ -0.02
CACNA1D-228ENST00000638120 HSCBQ8IWL3 235 aa14.92□□□□□ -0.02
CACNA1D-228ENST00000638120 CNTNAP4Q9C0A0 1308 aa14.92□□□□□ -0.02
CACNA1D-228ENST00000638120 EYA2O00167 538 aa14.92□□□□□ -0.02
CACNA1D-228ENST00000638120 CCDC57Q2TAC2 916 aa14.92□□□□□ -0.02
CACNA1D-228ENST00000638120 LINC00116Q8NCU8 138 aa14.92□□□□□ -0.02
CACNA1D-228ENST00000638120 GPR108Q9NPR9 543 aa14.92□□□□□ -0.02
CACNA1D-228ENST00000638120 DBNLQ9UJU6 430 aaKnown RBP14.92□□□□□ -0.02
CACNA1D-228ENST00000638120 FBXO3Q9UK99 471 aa14.92□□□□□ -0.02
CACNA1D-228ENST00000638120 LY75O60449 1722 aa14.91□□□□□ -0.02
CACNA1D-228ENST00000638120 EPB41L2O43491 1005 aaKnown RBP14.91□□□□□ -0.02
CACNA1D-228ENST00000638120 PTF1AQ7RTS3 328 aa14.91□□□□□ -0.02
CACNA1D-228ENST00000638120 EVI5LQ96CN4 794 aa14.91□□□□□ -0.02
CACNA1D-228ENST00000638120 TRMT112Q9UI30 125 aaKnown RBP14.91□□□□□ -0.02
CACNA1D-228ENST00000638120 ZNF609O15014 1411 aa14.91□□□□□ -0.02
CACNA1D-228ENST00000638120 RABEP1Q15276 862 aa14.9□□□□□ -0.02
CACNA1D-228ENST00000638120 SYNE4Q8N205 404 aa14.9□□□□□ -0.02
CACNA1D-228ENST00000638120 ZNF594Q96JF6 807 aaPredicted RBP14.9□□□□□ -0.02
CACNA1D-228ENST00000638120 SCN7AQ01118 1682 aa14.9□□□□□ -0.02
CACNA1D-228ENST00000638120 LAMB2P55268 1798 aa14.9□□□□□ -0.02
CACNA1D-228ENST00000638120 IRS4O14654 1257 aaPredicted RBP14.89□□□□□ -0.03
CACNA1D-228ENST00000638120 SGSM2O43147 1006 aa14.89□□□□□ -0.03
CACNA1D-228ENST00000638120 ATP5JP18859 108 aa14.89□□□□□ -0.03
CACNA1D-228ENST00000638120 CTSWP56202 376 aa14.89□□□□□ -0.03
CACNA1D-228ENST00000638120 LRRC24Q50LG9 513 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms