RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 AK7Q96M32 723 aa14.65□□□□□ -0.06
CLN6-223ENST00000637823 MYH3P11055 1940 aa14.64□□□□□ -0.07
CLN6-223ENST00000637823 SRGAP3O43295 1099 aa14.64□□□□□ -0.07
CLN6-223ENST00000637823 PCCAP05165 728 aaPredicted RBP14.64□□□□□ -0.07
CLN6-223ENST00000637823 ANKRD45Q5TZF3 282 aa14.64□□□□□ -0.07
CLN6-223ENST00000637823 ZBTB38Q8NAP3 1195 aaPredicted RBP14.64□□□□□ -0.07
CLN6-223ENST00000637823 BICC1Q9H694 974 aaKnown RBP14.64□□□□□ -0.07
CLN6-223ENST00000637823 NARFQ9UHQ1 456 aa14.64□□□□□ -0.07
CLN6-223ENST00000637823 SCN7AQ01118 1682 aa14.63□□□□□ -0.07
CLN6-223ENST00000637823 ZPR1O75312 459 aa14.63□□□□□ -0.07
CLN6-223ENST00000637823 ADRA2BP18089 450 aa14.63□□□□□ -0.07
CLN6-223ENST00000637823 GPTP24298 496 aa14.63□□□□□ -0.07
CLN6-223ENST00000637823 PARP10Q53GL7 1025 aa14.63□□□□□ -0.07
CLN6-223ENST00000637823 TRAPPC3LQ5T215 181 aa14.63□□□□□ -0.07
CLN6-223ENST00000637823 CHD1LQ86WJ1 897 aa14.63□□□□□ -0.07
CLN6-223ENST00000637823 JARID2Q92833 1246 aaPredicted RBP14.63□□□□□ -0.07
CLN6-223ENST00000637823 EP400Q96L91 3159 aa14.63□□□□□ -0.07
CLN6-223ENST00000637823 C4AP0C0L4 1744 aa14.62□□□□□ -0.07
CLN6-223ENST00000637823 RABL6Q3YEC7 729 aaPredicted RBP14.62□□□□□ -0.07
CLN6-223ENST00000637823 ARHGEF1Q92888 912 aaKnown RBP14.62□□□□□ -0.07
CLN6-223ENST00000637823 ZBTB47Q9UFB7 747 aaPredicted RBP14.62□□□□□ -0.07
CLN6-223ENST00000637823 CDHR2Q9BYE9 1310 aa14.62□□□□□ -0.07
CLN6-223ENST00000637823 RAB11FIP3O75154 756 aa14.61□□□□□ -0.07
CLN6-223ENST00000637823 RFC4P35249 363 aa14.61□□□□□ -0.07
CLN6-223ENST00000637823 FOXO4P98177 505 aa14.61□□□□□ -0.07
CLN6-223ENST00000637823 HSP90AB4PQ58FF6 505 aa14.61□□□□□ -0.07
CLN6-223ENST00000637823 EPHA10Q5JZY3 1008 aa14.61□□□□□ -0.07
CLN6-223ENST00000637823 PLA2G12BQ9BX93 195 aa14.61□□□□□ -0.07
CLN6-223ENST00000637823 TRMT112Q9UI30 125 aaKnown RBP14.61□□□□□ -0.07
CLN6-223ENST00000637823 NOP58Q9Y2X3 529 aaKnown RBP14.61□□□□□ -0.07
CLN6-223ENST00000637823 SURF6O75683 361 aaKnown RBP14.6□□□□□ -0.07
CLN6-223ENST00000637823 SSFA2P28290 1259 aa14.6□□□□□ -0.07
CLN6-223ENST00000637823 RGS3P49796 1198 aa14.6□□□□□ -0.07
CLN6-223ENST00000637823 SKAP1Q86WV1 359 aa14.6□□□□□ -0.07
CLN6-223ENST00000637823 FAM89AQ96GI7 184 aa14.6□□□□□ -0.07
CLN6-223ENST00000637823 UTP14AQ9BVJ6 771 aaKnown RBP14.6□□□□□ -0.07
CLN6-223ENST00000637823 NIP7Q9Y221 180 aaKnown RBP eCLIP14.6□□□□□ -0.07
CLN6-223ENST00000637823 UBN2Q6ZU65 1347 aa14.6□□□□□ -0.07
CLN6-223ENST00000637823 HSP90B1P14625 803 aaKnown RBP14.59□□□□□ -0.07
CLN6-223ENST00000637823 RTL5Q5HYW3 569 aaPredicted RBP14.59□□□□□ -0.07
CLN6-223ENST00000637823 SUSD4Q5VX71 490 aa14.59□□□□□ -0.07
CLN6-223ENST00000637823 USPL1Q5W0Q7 1092 aa14.59□□□□□ -0.07
CLN6-223ENST00000637823 LMBR1LQ6UX01 489 aa14.59□□□□□ -0.07
CLN6-223ENST00000637823 SMIM5Q71RC9 77 aa14.59□□□□□ -0.07
CLN6-223ENST00000637823 LNPKQ9C0E8 428 aa14.59□□□□□ -0.07
CLN6-223ENST00000637823 EXOC6BQ9Y2D4 811 aa14.59□□□□□ -0.07
CLN6-223ENST00000637823 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.58□□□□□ -0.08
CLN6-223ENST00000637823 PDE4AP27815 886 aa14.58□□□□□ -0.08
CLN6-223ENST00000637823 AMIGO3Q86WK7 504 aa14.58□□□□□ -0.08
CLN6-223ENST00000637823 LRRCC1Q9C099 1032 aa14.58□□□□□ -0.08
CLN6-223ENST00000637823 BCL2L12Q9HB09 334 aa14.58□□□□□ -0.08
CLN6-223ENST00000637823 SRP68Q9UHB9 627 aaKnown RBP14.58□□□□□ -0.08
CLN6-223ENST00000637823 USP42Q9H9J4 1324 aaKnown RBP14.58□□□□□ -0.08
CLN6-223ENST00000637823 IRS4O14654 1257 aaPredicted RBP14.57□□□□□ -0.08
CLN6-223ENST00000637823 PDE8AO60658 829 aa14.57□□□□□ -0.08
CLN6-223ENST00000637823 PHF14O94880 888 aa14.57□□□□□ -0.08
CLN6-223ENST00000637823 CSF1RP07333 972 aa14.57□□□□□ -0.08
CLN6-223ENST00000637823 SF3B2Q13435 895 aaKnown RBP14.57□□□□□ -0.08
CLN6-223ENST00000637823 AKT1S1Q96B36 256 aa14.57□□□□□ -0.08
CLN6-223ENST00000637823 CAMKK2Q96RR4 588 aa14.57□□□□□ -0.08
CLN6-223ENST00000637823 COPRSQ9NQ92 184 aa14.57□□□□□ -0.08
CLN6-223ENST00000637823 SH3TC1Q8TE82 1336 aa14.57□□□□□ -0.08
CLN6-223ENST00000637823 LAMB2P55268 1798 aa14.57□□□□□ -0.08
CLN6-223ENST00000637823 COL24A1Q17RW2 1714 aa14.56□□□□□ -0.08
CLN6-223ENST00000637823 APBB1O00213 710 aa14.56□□□□□ -0.08
CLN6-223ENST00000637823 RFX5P48382 616 aaPredicted RBP14.56□□□□□ -0.08
CLN6-223ENST00000637823 G3BP1Q13283 466 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLN6-223ENST00000637823 TBC1D9BQ66K14 1250 aa14.56□□□□□ -0.08
CLN6-223ENST00000637823 ERC1Q8IUD2 1116 aa14.56□□□□□ -0.08
CLN6-223ENST00000637823 SYNE4Q8N205 404 aa14.56□□□□□ -0.08
CLN6-223ENST00000637823 FLAD1Q8NFF5 587 aa14.56□□□□□ -0.08
CLN6-223ENST00000637823 KIF1BPQ96EK5 621 aa14.56□□□□□ -0.08
CLN6-223ENST00000637823 SETDB2Q96T68 719 aa14.56□□□□□ -0.08
CLN6-223ENST00000637823 TUBGCP6Q96RT7 1819 aa14.56□□□□□ -0.08
CLN6-223ENST00000637823 DDX60Q8IY21 1712 aaKnown RBP14.55□□□□□ -0.08
CLN6-223ENST00000637823 NTSR2O95665 410 aa14.55□□□□□ -0.08
CLN6-223ENST00000637823 OS9Q13438 667 aaPredicted RBP14.55□□□□□ -0.08
CLN6-223ENST00000637823 NYXQ9GZU5 481 aa14.55□□□□□ -0.08
CLN6-223ENST00000637823 TFCP2L1Q9NZI6 479 aa14.55□□□□□ -0.08
CLN6-223ENST00000637823 PA2G4Q9UQ80 394 aaKnown RBP14.55□□□□□ -0.08
CLN6-223ENST00000637823 CHMP3Q9Y3E7 222 aa14.55□□□□□ -0.08
CLN6-223ENST00000637823 FAM177BA6PVY3 158 aa14.54□□□□□ -0.08
CLN6-223ENST00000637823 SMARCA5O60264 1052 aaPredicted RBP14.54□□□□□ -0.08
CLN6-223ENST00000637823 BAG6P46379 1132 aa14.54□□□□□ -0.08
CLN6-223ENST00000637823 CTSWP56202 376 aa14.54□□□□□ -0.08
CLN6-223ENST00000637823 PTPN12Q05209 780 aaKnown RBP14.54□□□□□ -0.08
CLN6-223ENST00000637823 EN1Q05925 392 aaPredicted RBP14.54□□□□□ -0.08
CLN6-223ENST00000637823 BICDL1Q6ZP65 573 aa14.54□□□□□ -0.08
CLN6-223ENST00000637823 CCDC125Q86Z20 511 aa14.54□□□□□ -0.08
CLN6-223ENST00000637823 TTLL11Q8NHH1 800 aa14.54□□□□□ -0.08
CLN6-223ENST00000637823 RHPN1Q8TCX5 695 aa14.54□□□□□ -0.08
CLN6-223ENST00000637823 CASZ1Q86V15 1759 aa14.54□□□□□ -0.08
CLN6-223ENST00000637823 EZH2Q15910 746 aaKnown RBP14.53□□□□□ -0.08
CLN6-223ENST00000637823 ZNF827Q17R98 1081 aa14.53□□□□□ -0.08
CLN6-223ENST00000637823 CCDC57Q2TAC2 916 aa14.53□□□□□ -0.08
CLN6-223ENST00000637823 SLC10A5Q5PT55 438 aa14.53□□□□□ -0.08
CLN6-223ENST00000637823 PLEKHM2Q8IWE5 1019 aa14.53□□□□□ -0.08
CLN6-223ENST00000637823 C16orf71Q8IYS4 520 aaPredicted RBP14.53□□□□□ -0.08
CLN6-223ENST00000637823 QSER1Q2KHR3 1735 aa14.52□□□□□ -0.08
CLN6-223ENST00000637823 GYS1P13807 737 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms