RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 FER1L4A9Z1Z3 1794 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 ANKRD1Q15327 319 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 IFNL1Q8IU54 200 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 SIL1Q9H173 461 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 ARHGAP23Q9P227 1491 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 MROH1Q8NDA8 1641 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 CDK11BP21127 795 aaKnown RBP6.62□□□□□ -1.35
CHD2-227ENST00000637572 TRIM29Q14134 588 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 ANKRD44Q8N8A2 993 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 NLRP7Q8WX94 980 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 DDX12PQ92771 950 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 RPGRQ92834 1020 aaKnown RBP6.62□□□□□ -1.35
CHD2-227ENST00000637572 H3BQV1 296 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 DHX16O60231 1041 aaKnown RBP6.62□□□□□ -1.35
CHD2-227ENST00000637572 NUCB2P80303 420 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 SLC39A6Q13433 755 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 IFFO2Q5TF58 517 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 DDX46Q7L014 1031 aaKnown RBP6.62□□□□□ -1.35
CHD2-227ENST00000637572 SLF2Q8IX21 1173 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 PLBD2Q8NHP8 589 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 PLEKHF1Q96S99 279 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 SETDB2Q96T68 719 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 PTPRUQ92729 1446 aa6.62□□□□□ -1.35
CHD2-227ENST00000637572 DDX11L8A8MPP1 907 aa6.61□□□□□ -1.35
CHD2-227ENST00000637572 TRIM37O94972 964 aa6.61□□□□□ -1.35
CHD2-227ENST00000637572 TTF1Q15361 905 aaPredicted RBP6.61□□□□□ -1.35
CHD2-227ENST00000637572 TMCO4Q5TGY1 634 aa6.61□□□□□ -1.35
CHD2-227ENST00000637572 TRIM44Q96DX7 344 aaPredicted RBP6.61□□□□□ -1.35
CHD2-227ENST00000637572 ADGRB1O14514 1584 aa6.61□□□□□ -1.35
CHD2-227ENST00000637572 ATP8B2P98198 1209 aa6.61□□□□□ -1.35
CHD2-227ENST00000637572 TPTE2Q6XPS3 522 aa6.61□□□□□ -1.35
CHD2-227ENST00000637572 DZIP3Q86Y13 1208 aaKnown RBP6.61□□□□□ -1.35
CHD2-227ENST00000637572 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.61□□□□□ -1.35
CHD2-227ENST00000637572 PHF14O94880 888 aa6.61□□□□□ -1.35
CHD2-227ENST00000637572 ZBTB7AO95365 584 aa6.61□□□□□ -1.35
CHD2-227ENST00000637572 RFX1P22670 979 aa6.61□□□□□ -1.35
CHD2-227ENST00000637572 IL15P40933 162 aaPredicted RBP6.61□□□□□ -1.35
CHD2-227ENST00000637572 BICDL1Q6ZP65 573 aa6.61□□□□□ -1.35
CHD2-227ENST00000637572 UBE3BQ7Z3V4 1068 aa6.61□□□□□ -1.35
CHD2-227ENST00000637572 NLRP3Q96P20 1036 aa6.61□□□□□ -1.35
CHD2-227ENST00000637572 UTP14AQ9BVJ6 771 aaKnown RBP6.61□□□□□ -1.35
CHD2-227ENST00000637572 GZF1Q9H116 711 aaPredicted RBP6.61□□□□□ -1.35
CHD2-227ENST00000637572 PNPLA6Q8IY17 1366 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 UQCRFS1P1P0C7P4 283 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 EIF4A1P60842 406 aaKnown RBP6.6□□□□□ -1.35
CHD2-227ENST00000637572 NBPF5PQ86XG9 351 aaPredicted RBP6.6□□□□□ -1.35
CHD2-227ENST00000637572 CCDC191Q8NCU4 936 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 ZNF287Q9HBT7 754 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 ECHDC1Q9NTX5 307 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 EXOC6BQ9Y2D4 811 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 BCORL1Q5H9F3 1711 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 CHRM1P11229 460 aaPredicted RBP6.6□□□□□ -1.35
CHD2-227ENST00000637572 XBP1P17861 261 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 PDCP20941 246 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 SKOR2Q2VWA4 1001 aaPredicted RBP6.6□□□□□ -1.35
CHD2-227ENST00000637572 L1TD1Q5T7N2 865 aaKnown RBP6.6□□□□□ -1.35
CHD2-227ENST00000637572 FLAD1Q8NFF5 587 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 LDHAL6AQ6ZMR3 332 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 ACSBG1Q96GR2 724 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 SLKQ9H2G2 1235 aaPredicted RBP6.6□□□□□ -1.35
CHD2-227ENST00000637572 MAP3K12Q12852 859 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 BMP2KLQ5H9B9 411 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 C20orf194Q5TEA3 1177 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 NFXL1Q6ZNB6 911 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 CHMP5Q9NZZ3 219 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 MROH2AA6NES4 1674 aa6.6□□□□□ -1.35
CHD2-227ENST00000637572 MAP3K13O43283 966 aa6.59□□□□□ -1.35
CHD2-227ENST00000637572 SAFBQ15424 915 aaKnown RBP eCLIP6.59□□□□□ -1.35
CHD2-227ENST00000637572 UNC5CLQ8IV45 518 aa6.59□□□□□ -1.35
CHD2-227ENST00000637572 PARP9Q8IXQ6 854 aa6.59□□□□□ -1.35
CHD2-227ENST00000637572 EVI5LQ96CN4 794 aa6.59□□□□□ -1.35
CHD2-227ENST00000637572 METTL22Q9BUU2 404 aaPredicted RBP6.59□□□□□ -1.35
CHD2-227ENST00000637572 IL1RAPL2Q9NP60 686 aa6.59□□□□□ -1.35
CHD2-227ENST00000637572 REM2Q8IYK8 340 aaPredicted RBP6.59□□□□□ -1.35
CHD2-227ENST00000637572 TSPYL6Q8N831 410 aa6.59□□□□□ -1.35
CHD2-227ENST00000637572 PCMTD1Q96MG8 357 aaPredicted RBP6.59□□□□□ -1.35
CHD2-227ENST00000637572 BEGAINQ9BUH8 593 aa6.59□□□□□ -1.35
CHD2-227ENST00000637572 BACH2Q9BYV9 841 aa6.59□□□□□ -1.35
CHD2-227ENST00000637572 SMC3Q9UQE7 1217 aa6.59□□□□□ -1.35
CHD2-227ENST00000637572 GPTP24298 496 aa6.59□□□□□ -1.35
CHD2-227ENST00000637572 SF3A1Q15459 793 aaKnown RBP6.59□□□□□ -1.35
CHD2-227ENST00000637572 TRAPPC3LQ5T215 181 aa6.59□□□□□ -1.35
CHD2-227ENST00000637572 SPTY2D1Q68D10 685 aaPredicted RBP6.59□□□□□ -1.35
CHD2-227ENST00000637572 CCDC87Q9NVE4 849 aa6.59□□□□□ -1.35
CHD2-227ENST00000637572 LRP2BPQ9P2M1 347 aa6.59□□□□□ -1.35
CHD2-227ENST00000637572 CCNL1Q9UK58 526 aaPredicted RBP6.59□□□□□ -1.35
CHD2-227ENST00000637572 CTDP1Q9Y5B0 961 aaPredicted RBP6.59□□□□□ -1.35
CHD2-227ENST00000637572 PPLO60437 1756 aa6.59□□□□□ -1.36
CHD2-227ENST00000637572 LDHCP07864 332 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 ZFYP08048 801 aaPredicted RBP6.58□□□□□ -1.36
CHD2-227ENST00000637572 FKBP4Q02790 459 aaKnown RBP eCLIP6.58□□□□□ -1.36
CHD2-227ENST00000637572 IL17REQ8NFR9 667 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 LGR6Q9HBX8 967 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 ZBTB40Q9NUA8 1239 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 NIP7Q9Y221 180 aaKnown RBP eCLIP6.58□□□□□ -1.36
CHD2-227ENST00000637572 CYP46A1Q9Y6A2 500 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 IQGAP1P46940 1657 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 CPS1P31327 1500 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 ATP5J2-PTCD1G3V325 749 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 ANKRD18AQ8IVF6 992 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms