RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 ZNF34Q8IZ26 560 aa20.87■□□□□ 0.93
CLCN2-220ENST00000637538 PROM2Q8N271 834 aa20.87■□□□□ 0.93
CLCN2-220ENST00000637538 UBE3BQ7Z3V4 1068 aa20.86■□□□□ 0.93
CLCN2-220ENST00000637538 EPHA10Q5JZY3 1008 aa20.85■□□□□ 0.93
CLCN2-220ENST00000637538 NLRP10Q86W26 655 aa20.85■□□□□ 0.93
CLCN2-220ENST00000637538 ARXQ96QS3 562 aa20.85■□□□□ 0.93
CLCN2-220ENST00000637538 BICC1Q9H694 974 aaKnown RBP20.85■□□□□ 0.93
CLCN2-220ENST00000637538 RABL6Q3YEC7 729 aaPredicted RBP20.84■□□□□ 0.93
CLCN2-220ENST00000637538 AMIGO3Q86WK7 504 aa20.84■□□□□ 0.93
CLCN2-220ENST00000637538 UBR3Q6ZT12 1888 aa20.84■□□□□ 0.93
CLCN2-220ENST00000637538 C4AP0C0L4 1744 aa20.84■□□□□ 0.93
CLCN2-220ENST00000637538 UBN2Q6ZU65 1347 aa20.84■□□□□ 0.93
CLCN2-220ENST00000637538 GNPATO15228 680 aa20.83■□□□□ 0.93
CLCN2-220ENST00000637538 PCCAP05165 728 aaPredicted RBP20.83■□□□□ 0.93
CLCN2-220ENST00000637538 TXNRD1Q16881 649 aa20.83■□□□□ 0.93
CLCN2-220ENST00000637538 JARID2Q92833 1246 aaPredicted RBP20.83■□□□□ 0.93
CLCN2-220ENST00000637538 SRGAP3O43295 1099 aa20.83■□□□□ 0.92
CLCN2-220ENST00000637538 PDE4AP27815 886 aa20.83■□□□□ 0.92
CLCN2-220ENST00000637538 CLEC4GQ6UXB4 293 aa20.83■□□□□ 0.92
CLCN2-220ENST00000637538 CHD1LQ86WJ1 897 aa20.83■□□□□ 0.92
CLCN2-220ENST00000637538 ZBTB38Q8NAP3 1195 aaPredicted RBP20.82■□□□□ 0.92
CLCN2-220ENST00000637538 RTCBQ9Y3I0 505 aaKnown RBP20.82■□□□□ 0.92
CLCN2-220ENST00000637538 GPTP24298 496 aa20.81■□□□□ 0.92
CLCN2-220ENST00000637538 FOXO4P98177 505 aa20.81■□□□□ 0.92
CLCN2-220ENST00000637538 SMIM5Q71RC9 77 aa20.81■□□□□ 0.92
CLCN2-220ENST00000637538 BCL2L12Q9HB09 334 aa20.81■□□□□ 0.92
CLCN2-220ENST00000637538 NARFQ9UHQ1 456 aa20.81■□□□□ 0.92
CLCN2-220ENST00000637538 CDHR2Q9BYE9 1310 aa20.8■□□□□ 0.92
CLCN2-220ENST00000637538 HMGB2P26583 209 aaKnown RBP20.8■□□□□ 0.92
CLCN2-220ENST00000637538 ANKRD45Q5TZF3 282 aa20.8■□□□□ 0.92
CLCN2-220ENST00000637538 PLA2G12BQ9BX93 195 aa20.8■□□□□ 0.92
CLCN2-220ENST00000637538 NOP58Q9Y2X3 529 aaKnown RBP20.8■□□□□ 0.92
CLCN2-220ENST00000637538 ADRA2BP18089 450 aa20.79■□□□□ 0.92
CLCN2-220ENST00000637538 AK7Q96M32 723 aa20.79■□□□□ 0.92
CLCN2-220ENST00000637538 ZNF652Q9Y2D9 606 aa20.79■□□□□ 0.92
CLCN2-220ENST00000637538 RGS3P49796 1198 aa20.78■□□□□ 0.92
CLCN2-220ENST00000637538 PARP10Q53GL7 1025 aa20.78■□□□□ 0.92
CLCN2-220ENST00000637538 ARHGEF1Q92888 912 aaKnown RBP20.78■□□□□ 0.92
CLCN2-220ENST00000637538 LNPKQ9C0E8 428 aa20.78■□□□□ 0.92
CLCN2-220ENST00000637538 EXOC6BQ9Y2D4 811 aa20.78■□□□□ 0.92
CLCN2-220ENST00000637538 RFX5P48382 616 aaPredicted RBP20.78■□□□□ 0.92
CLCN2-220ENST00000637538 TSHZ2Q9NRE2 1034 aa20.78■□□□□ 0.92
CLCN2-220ENST00000637538 COL24A1Q17RW2 1714 aa20.77■□□□□ 0.92
CLCN2-220ENST00000637538 FAM89AQ96GI7 184 aa20.77■□□□□ 0.92
CLCN2-220ENST00000637538 USP42Q9H9J4 1324 aaKnown RBP20.76■□□□□ 0.91
CLCN2-220ENST00000637538 R3HDM1Q15032 1099 aaKnown RBP20.76■□□□□ 0.91
CLCN2-220ENST00000637538 RTL5Q5HYW3 569 aaPredicted RBP20.76■□□□□ 0.91
CLCN2-220ENST00000637538 SUSD4Q5VX71 490 aa20.76■□□□□ 0.91
CLCN2-220ENST00000637538 USPL1Q5W0Q7 1092 aa20.76■□□□□ 0.91
CLCN2-220ENST00000637538 SRP68Q9UHB9 627 aaKnown RBP20.76■□□□□ 0.91
CLCN2-220ENST00000637538 PSDA5PKW4 1024 aaPredicted RBP20.75■□□□□ 0.91
CLCN2-220ENST00000637538 RAB11FIP3O75154 756 aa20.75■□□□□ 0.91
CLCN2-220ENST00000637538 SSFA2P28290 1259 aa20.75■□□□□ 0.91
CLCN2-220ENST00000637538 TRAPPC3LQ5T215 181 aa20.75■□□□□ 0.91
CLCN2-220ENST00000637538 LMBR1LQ6UX01 489 aa20.75■□□□□ 0.91
CLCN2-220ENST00000637538 SYNE4Q8N205 404 aa20.75■□□□□ 0.91
CLCN2-220ENST00000637538 NIP7Q9Y221 180 aaKnown RBP eCLIP20.75■□□□□ 0.91
CLCN2-220ENST00000637538 LAMB2P55268 1798 aa20.75■□□□□ 0.91
CLCN2-220ENST00000637538 SURF6O75683 361 aaKnown RBP20.74■□□□□ 0.91
CLCN2-220ENST00000637538 NTSR2O95665 410 aa20.74■□□□□ 0.91
CLCN2-220ENST00000637538 AKT1S1Q96B36 256 aa20.74■□□□□ 0.91
CLCN2-220ENST00000637538 TRMT112Q9UI30 125 aaKnown RBP20.74■□□□□ 0.91
CLCN2-220ENST00000637538 CSF1RP07333 972 aa20.73■□□□□ 0.91
CLCN2-220ENST00000637538 HSP90AB4PQ58FF6 505 aa20.73■□□□□ 0.91
CLCN2-220ENST00000637538 UTP14AQ9BVJ6 771 aaKnown RBP20.73■□□□□ 0.91
CLCN2-220ENST00000637538 LRRCC1Q9C099 1032 aa20.73■□□□□ 0.91
CLCN2-220ENST00000637538 ANO8Q9HCE9 1232 aaPredicted RBP20.73■□□□□ 0.91
CLCN2-220ENST00000637538 COPRSQ9NQ92 184 aa20.73■□□□□ 0.91
CLCN2-220ENST00000637538 MYH3P11055 1940 aa20.73■□□□□ 0.91
CLCN2-220ENST00000637538 DDX60Q8IY21 1712 aaKnown RBP20.73■□□□□ 0.91
CLCN2-220ENST00000637538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.73■□□□□ 0.91
CLCN2-220ENST00000637538 SMARCA5O60264 1052 aaPredicted RBP20.73■□□□□ 0.91
CLCN2-220ENST00000637538 ZPR1O75312 459 aa20.73■□□□□ 0.91
CLCN2-220ENST00000637538 PA2G4Q9UQ80 394 aaKnown RBP20.73■□□□□ 0.91
CLCN2-220ENST00000637538 TUBGCP6Q96RT7 1819 aa20.72■□□□□ 0.91
CLCN2-220ENST00000637538 PHF14O94880 888 aa20.72■□□□□ 0.91
CLCN2-220ENST00000637538 PTPN12Q05209 780 aaKnown RBP20.72■□□□□ 0.91
CLCN2-220ENST00000637538 ZNF827Q17R98 1081 aa20.72■□□□□ 0.91
CLCN2-220ENST00000637538 TBC1D9BQ66K14 1250 aa20.72■□□□□ 0.91
CLCN2-220ENST00000637538 SH3TC1Q8TE82 1336 aa20.72■□□□□ 0.91
CLCN2-220ENST00000637538 APBB1O00213 710 aa20.71■□□□□ 0.91
CLCN2-220ENST00000637538 IRS4O14654 1257 aaPredicted RBP20.71■□□□□ 0.91
CLCN2-220ENST00000637538 RFC4P35249 363 aa20.71■□□□□ 0.91
CLCN2-220ENST00000637538 SLC15A2Q16348 729 aa20.71■□□□□ 0.91
CLCN2-220ENST00000637538 RHPN1Q8TCX5 695 aa20.71■□□□□ 0.91
CLCN2-220ENST00000637538 STK32BQ9NY57 414 aa20.71■□□□□ 0.91
CLCN2-220ENST00000637538 SALL3Q9BXA9 1300 aa20.71■□□□□ 0.91
CLCN2-220ENST00000637538 KIF1BPQ96EK5 621 aa20.7■□□□□ 0.9
CLCN2-220ENST00000637538 PDE8AO60658 829 aa20.69■□□□□ 0.9
CLCN2-220ENST00000637538 CTSWP56202 376 aa20.69■□□□□ 0.9
CLCN2-220ENST00000637538 PLEKHM2Q8IWE5 1019 aa20.69■□□□□ 0.9
CLCN2-220ENST00000637538 C16orf71Q8IYS4 520 aaPredicted RBP20.69■□□□□ 0.9
CLCN2-220ENST00000637538 KLHDC4Q8TBB5 520 aa20.69■□□□□ 0.9
CLCN2-220ENST00000637538 ERC1Q8IUD2 1116 aa20.68■□□□□ 0.9
CLCN2-220ENST00000637538 TTLL11Q8NHH1 800 aa20.68■□□□□ 0.9
CLCN2-220ENST00000637538 OTUD7AQ8TE49 926 aaPredicted RBP20.68■□□□□ 0.9
CLCN2-220ENST00000637538 ZBTB47Q9UFB7 747 aaPredicted RBP20.68■□□□□ 0.9
CLCN2-220ENST00000637538 SASH1O94885 1247 aa20.67■□□□□ 0.9
CLCN2-220ENST00000637538 GYS1P13807 737 aa20.67■□□□□ 0.9
CLCN2-220ENST00000637538 G3BP1Q13283 466 aaKnown RBP eCLIP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms