RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 CASP7P55210 303 aa19.07■□□□□ 0.64
CLN6-219ENST00000637329 PPP1R42Q7Z4L9 355 aa19.07■□□□□ 0.64
CLN6-219ENST00000637329 SRGAP3O43295 1099 aa19.06■□□□□ 0.64
CLN6-219ENST00000637329 RGS3P49796 1198 aa19.06■□□□□ 0.64
CLN6-219ENST00000637329 C1QTNF8P60827 252 aa19.06■□□□□ 0.64
CLN6-219ENST00000637329 RABL6Q3YEC7 729 aaPredicted RBP19.06■□□□□ 0.64
CLN6-219ENST00000637329 HSP90AB4PQ58FF6 505 aa19.06■□□□□ 0.64
CLN6-219ENST00000637329 UBE3BQ7Z3V4 1068 aa19.06■□□□□ 0.64
CLN6-219ENST00000637329 BICC1Q9H694 974 aaKnown RBP19.06■□□□□ 0.64
CLN6-219ENST00000637329 ZBTB47Q9UFB7 747 aaPredicted RBP19.06■□□□□ 0.64
CLN6-219ENST00000637329 ZNF652Q9Y2D9 606 aa19.06■□□□□ 0.64
CLN6-219ENST00000637329 ANKRD45Q5TZF3 282 aa19.05■□□□□ 0.64
CLN6-219ENST00000637329 KAZALD1Q96I82 304 aa19.05■□□□□ 0.64
CLN6-219ENST00000637329 LAMB2P55268 1798 aa19.05■□□□□ 0.64
CLN6-219ENST00000637329 C4AP0C0L4 1744 aa19.05■□□□□ 0.64
CLN6-219ENST00000637329 CDHR2Q9BYE9 1310 aa19.04■□□□□ 0.64
CLN6-219ENST00000637329 RAB11FIP3O75154 756 aa19.04■□□□□ 0.64
CLN6-219ENST00000637329 RPS6KA4O75676 772 aa19.04■□□□□ 0.64
CLN6-219ENST00000637329 CAMTA2O94983 1202 aa19.04■□□□□ 0.64
CLN6-219ENST00000637329 PCCAP05165 728 aaPredicted RBP19.04■□□□□ 0.64
CLN6-219ENST00000637329 SKAP1Q86WV1 359 aa19.04■□□□□ 0.64
CLN6-219ENST00000637329 PDE4AP27815 886 aa19.03■□□□□ 0.64
CLN6-219ENST00000637329 HLFQ16534 295 aa19.03■□□□□ 0.64
CLN6-219ENST00000637329 PARP10Q53GL7 1025 aa19.03■□□□□ 0.64
CLN6-219ENST00000637329 CLEC4GQ6UXB4 293 aa19.03■□□□□ 0.64
CLN6-219ENST00000637329 NLRP10Q86W26 655 aa19.03■□□□□ 0.64
CLN6-219ENST00000637329 ZBTB38Q8NAP3 1195 aaPredicted RBP19.03■□□□□ 0.64
CLN6-219ENST00000637329 LNPKQ9C0E8 428 aa19.03■□□□□ 0.64
CLN6-219ENST00000637329 TBC1D2BQ9UPU7 963 aa19.03■□□□□ 0.64
CLN6-219ENST00000637329 NOP58Q9Y2X3 529 aaKnown RBP19.03■□□□□ 0.64
CLN6-219ENST00000637329 COL24A1Q17RW2 1714 aa19.03■□□□□ 0.64
CLN6-219ENST00000637329 ZNF34Q8IZ26 560 aa19.02■□□□□ 0.64
CLN6-219ENST00000637329 ARXQ96QS3 562 aa19.02■□□□□ 0.64
CLN6-219ENST00000637329 UBR3Q6ZT12 1888 aa19.01■□□□□ 0.63
CLN6-219ENST00000637329 ADRA2BP18089 450 aa19.01■□□□□ 0.63
CLN6-219ENST00000637329 ERC1Q8IUD2 1116 aa19.01■□□□□ 0.63
CLN6-219ENST00000637329 PLA2G12BQ9BX93 195 aa19.01■□□□□ 0.63
CLN6-219ENST00000637329 LRRCC1Q9C099 1032 aa19.01■□□□□ 0.63
CLN6-219ENST00000637329 RTCBQ9Y3I0 505 aaKnown RBP19.01■□□□□ 0.63
CLN6-219ENST00000637329 PLSCR1O15162 318 aa19■□□□□ 0.63
CLN6-219ENST00000637329 GNPATO15228 680 aa19■□□□□ 0.63
CLN6-219ENST00000637329 AK7Q96M32 723 aa19■□□□□ 0.63
CLN6-219ENST00000637329 EXOC6BQ9Y2D4 811 aa19■□□□□ 0.63
CLN6-219ENST00000637329 UBN2Q6ZU65 1347 aa19■□□□□ 0.63
CLN6-219ENST00000637329 KIF1BPQ96EK5 621 aa18.99■□□□□ 0.63
CLN6-219ENST00000637329 SURF6O75683 361 aaKnown RBP18.98■□□□□ 0.63
CLN6-219ENST00000637329 KCNQ4P56696 695 aa18.98■□□□□ 0.63
CLN6-219ENST00000637329 FOXO4P98177 505 aa18.98■□□□□ 0.63
CLN6-219ENST00000637329 EPHA10Q5JZY3 1008 aa18.98■□□□□ 0.63
CLN6-219ENST00000637329 LRRC4BQ9NT99 713 aa18.98■□□□□ 0.63
CLN6-219ENST00000637329 NARFQ9UHQ1 456 aa18.98■□□□□ 0.63
CLN6-219ENST00000637329 MYH3P11055 1940 aa18.98■□□□□ 0.63
CLN6-219ENST00000637329 HSP90B1P14625 803 aaKnown RBP18.97■□□□□ 0.63
CLN6-219ENST00000637329 GPTP24298 496 aa18.97■□□□□ 0.63
CLN6-219ENST00000637329 FAM161AQ3B820 660 aa18.97■□□□□ 0.63
CLN6-219ENST00000637329 COPRSQ9NQ92 184 aa18.97■□□□□ 0.63
CLN6-219ENST00000637329 TSHZ2Q9NRE2 1034 aa18.97■□□□□ 0.63
CLN6-219ENST00000637329 USP42Q9H9J4 1324 aaKnown RBP18.96■□□□□ 0.63
CLN6-219ENST00000637329 SSFA2P28290 1259 aa18.95■□□□□ 0.62
CLN6-219ENST00000637329 TXNRD1Q16881 649 aa18.95■□□□□ 0.62
CLN6-219ENST00000637329 BMP2KLQ5H9B9 411 aa18.95■□□□□ 0.62
CLN6-219ENST00000637329 LMBR1LQ6UX01 489 aa18.95■□□□□ 0.62
CLN6-219ENST00000637329 RHPN1Q8TCX5 695 aa18.95■□□□□ 0.62
CLN6-219ENST00000637329 TRMT112Q9UI30 125 aaKnown RBP18.95■□□□□ 0.62
CLN6-219ENST00000637329 DDX60Q8IY21 1712 aaKnown RBP18.94■□□□□ 0.62
CLN6-219ENST00000637329 ZPR1O75312 459 aa18.94■□□□□ 0.62
CLN6-219ENST00000637329 RFX5P48382 616 aaPredicted RBP18.94■□□□□ 0.62
CLN6-219ENST00000637329 OS9Q13438 667 aaPredicted RBP18.94■□□□□ 0.62
CLN6-219ENST00000637329 UTP14AQ9BVJ6 771 aaKnown RBP18.94■□□□□ 0.62
CLN6-219ENST00000637329 NIP7Q9Y221 180 aaKnown RBP eCLIP18.94■□□□□ 0.62
CLN6-219ENST00000637329 AOX1Q06278 1338 aa18.94■□□□□ 0.62
CLN6-219ENST00000637329 SH3TC1Q8TE82 1336 aa18.94■□□□□ 0.62
CLN6-219ENST00000637329 SALL3Q9BXA9 1300 aa18.94■□□□□ 0.62
CLN6-219ENST00000637329 NTSR2O95665 410 aa18.93■□□□□ 0.62
CLN6-219ENST00000637329 PLEKHM2Q8IWE5 1019 aa18.93■□□□□ 0.62
CLN6-219ENST00000637329 JARID2Q92833 1246 aaPredicted RBP18.93■□□□□ 0.62
CLN6-219ENST00000637329 FAM89AQ96GI7 184 aa18.93■□□□□ 0.62
CLN6-219ENST00000637329 BACH2Q9BYV9 841 aa18.93■□□□□ 0.62
CLN6-219ENST00000637329 OSBPL3Q9H4L5 887 aa18.93■□□□□ 0.62
CLN6-219ENST00000637329 APBB1O00213 710 aa18.92■□□□□ 0.62
CLN6-219ENST00000637329 IRS4O14654 1257 aaPredicted RBP18.92■□□□□ 0.62
CLN6-219ENST00000637329 PDE8AO60658 829 aa18.92■□□□□ 0.62
CLN6-219ENST00000637329 CSF1RP07333 972 aa18.92■□□□□ 0.62
CLN6-219ENST00000637329 CTSWP56202 376 aa18.92■□□□□ 0.62
CLN6-219ENST00000637329 PTPN12Q05209 780 aaKnown RBP18.92■□□□□ 0.62
CLN6-219ENST00000637329 G3BP1Q13283 466 aaKnown RBP eCLIP18.92■□□□□ 0.62
CLN6-219ENST00000637329 C8orf34Q49A92 452 aa18.92■□□□□ 0.62
CLN6-219ENST00000637329 TRAPPC3LQ5T215 181 aa18.92■□□□□ 0.62
CLN6-219ENST00000637329 FBXO3Q9UK99 471 aa18.92■□□□□ 0.62
CLN6-219ENST00000637329 SMARCA5O60264 1052 aaPredicted RBP18.91■□□□□ 0.62
CLN6-219ENST00000637329 SUSD4Q5VX71 490 aa18.91■□□□□ 0.62
CLN6-219ENST00000637329 ARHGEF1Q92888 912 aaKnown RBP18.91■□□□□ 0.62
CLN6-219ENST00000637329 BCL2L12Q9HB09 334 aa18.91■□□□□ 0.62
CLN6-219ENST00000637329 PA2G4Q9UQ80 394 aaKnown RBP18.91■□□□□ 0.62
CLN6-219ENST00000637329 RTL9Q8NET4 1388 aa18.91■□□□□ 0.62
CLN6-219ENST00000637329 RFC4P35249 363 aa18.9■□□□□ 0.62
CLN6-219ENST00000637329 RTL5Q5HYW3 569 aaPredicted RBP18.9■□□□□ 0.62
CLN6-219ENST00000637329 USPL1Q5W0Q7 1092 aa18.9■□□□□ 0.62
CLN6-219ENST00000637329 NYXQ9GZU5 481 aa18.9■□□□□ 0.62
CLN6-219ENST00000637329 STAP2Q9UGK3 403 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 548.4 ms