RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 EML3Q32P44 896 aa2.81□□□□□ -1.96
SMARCB1-209ENST00000635578 PRR23CQ6ZRP0 262 aa2.81□□□□□ -1.96
SMARCB1-209ENST00000635578 FAM35AQ86V20 835 aa2.81□□□□□ -1.96
SMARCB1-209ENST00000635578 C7orf43Q8WVR3 580 aa2.81□□□□□ -1.96
SMARCB1-209ENST00000635578 PNMA5Q96PV4 448 aa2.81□□□□□ -1.96
SMARCB1-209ENST00000635578 PHACTR1Q9C0D0 580 aa2.81□□□□□ -1.96
SMARCB1-209ENST00000635578 GDPD2Q9HCC8 539 aa2.81□□□□□ -1.96
SMARCB1-209ENST00000635578 PRM3Q9NNZ6 103 aa2.81□□□□□ -1.96
SMARCB1-209ENST00000635578 NOD1Q9Y239 953 aa2.81□□□□□ -1.96
SMARCB1-209ENST00000635578 GPC6Q9Y625 555 aaPredicted RBP2.81□□□□□ -1.96
SMARCB1-209ENST00000635578 ALX3O95076 343 aa2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 SKIP12755 728 aa2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 TAL1P17542 331 aaPredicted RBP2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 EPHA4P54764 986 aa2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 KCNQ4P56696 695 aa2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 MLLT1Q03111 559 aaPredicted RBP2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 PLAURQ03405 335 aa2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 LCE1DQ5T752 114 aa2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 WFDC8Q8IUA0 241 aa2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 DEPDC4Q8N2C3 294 aa2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 SUSD3Q96L08 255 aa2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 KRTAP4-7Q9BYR0 210 aa2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 TSPAN10Q9H1Z9 355 aaPredicted RBP2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 ANKIB1Q9P2G1 1089 aa2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 RNF114Q9Y508 228 aa2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 OAS3Q9Y6K5 1087 aaKnown RBP2.8□□□□□ -1.96
SMARCB1-209ENST00000635578 MED26O95402 600 aa2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 CD97P48960 835 aa2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 PSMA6P60900 246 aaKnown RBP2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 NCOA4Q13772 614 aa2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 C1orf53Q5VUE5 145 aa2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 MSL1Q68DK7 614 aa2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 KRT25Q7Z3Z0 450 aa2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 FBXO11Q86XK2 927 aa2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 TPCN2Q8NHX9 752 aa2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 NGLY1Q96IV0 654 aa2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 FMNL2Q96PY5 1086 aa2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 AKTIPQ9H8T0 292 aa2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 CHMP3Q9Y3E7 222 aa2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.79□□□□□ -1.96
SMARCB1-209ENST00000635578 PPP1R12BO60237 982 aaPredicted RBP2.78□□□□□ -1.96
SMARCB1-209ENST00000635578 PTCD1O75127 700 aaKnown RBP2.78□□□□□ -1.96
SMARCB1-209ENST00000635578 DEAF1O75398 565 aaPredicted RBP2.78□□□□□ -1.96
SMARCB1-209ENST00000635578 TGFB1P01137 390 aa2.78□□□□□ -1.96
SMARCB1-209ENST00000635578 GP2P55259 537 aaKnown RBP2.78□□□□□ -1.96
SMARCB1-209ENST00000635578 FZD5Q13467 585 aa2.78□□□□□ -1.96
SMARCB1-209ENST00000635578 PERM1Q5SV97 790 aa2.78□□□□□ -1.96
SMARCB1-209ENST00000635578 ELMSAN1Q6PJG2 1045 aa2.78□□□□□ -1.96
SMARCB1-209ENST00000635578 IGF2-ASQ6U949 168 aa2.78□□□□□ -1.96
SMARCB1-209ENST00000635578 BTLAQ7Z6A9 289 aa2.78□□□□□ -1.96
SMARCB1-209ENST00000635578 DTWD1Q8N5C7 304 aa2.78□□□□□ -1.96
SMARCB1-209ENST00000635578 GSX2Q9BZM3 304 aa2.78□□□□□ -1.96
SMARCB1-209ENST00000635578 GLB1P16278 677 aa2.77□□□□□ -1.97
SMARCB1-209ENST00000635578 HIRAP54198 1017 aaPredicted RBP2.77□□□□□ -1.97
SMARCB1-209ENST00000635578 BRPF1P55201 1214 aaPredicted RBP2.77□□□□□ -1.97
SMARCB1-209ENST00000635578 CCINQ13939 588 aa2.77□□□□□ -1.97
SMARCB1-209ENST00000635578 GRIK5Q16478 980 aa2.77□□□□□ -1.97
SMARCB1-209ENST00000635578 WASHC4Q2M389 1173 aa2.77□□□□□ -1.97
SMARCB1-209ENST00000635578 HFE2Q6ZVN8 426 aa2.77□□□□□ -1.97
SMARCB1-209ENST00000635578 AGGF1Q8N302 714 aaeCLIP2.77□□□□□ -1.97
SMARCB1-209ENST00000635578 CHMP7Q8WUX9 453 aaPredicted RBP2.77□□□□□ -1.97
SMARCB1-209ENST00000635578 LPIN3Q9BQK8 851 aa2.77□□□□□ -1.97
SMARCB1-209ENST00000635578 KIAA1024Q9UPX6 916 aa2.77□□□□□ -1.97
SMARCB1-209ENST00000635578 ARID1BQ8NFD5 2236 aaPredicted RBP2.77□□□□□ -1.97
SMARCB1-209ENST00000635578 USP17L5A8MUK1 530 aa2.76□□□□□ -1.97
SMARCB1-209ENST00000635578 DLL1O00548 723 aa2.76□□□□□ -1.97
SMARCB1-209ENST00000635578 ADAMTS4O75173 837 aa2.76□□□□□ -1.97
SMARCB1-209ENST00000635578 EIF2AK2P19525 551 aaKnown RBP2.76□□□□□ -1.97
SMARCB1-209ENST00000635578 CCDC102BQ68D86 513 aa2.76□□□□□ -1.97
SMARCB1-209ENST00000635578 GDF6Q6KF10 455 aaPredicted RBP2.76□□□□□ -1.97
SMARCB1-209ENST00000635578 ILDR2Q71H61 639 aa2.76□□□□□ -1.97
SMARCB1-209ENST00000635578 DZIP1LQ8IYY4 767 aaKnown RBP2.76□□□□□ -1.97
SMARCB1-209ENST00000635578 ALDH16A1Q8IZ83 802 aa2.76□□□□□ -1.97
SMARCB1-209ENST00000635578 TSEN2Q8NCE0 465 aaKnown RBP2.76□□□□□ -1.97
SMARCB1-209ENST00000635578 SMG9Q9H0W8 520 aaKnown RBP2.76□□□□□ -1.97
SMARCB1-209ENST00000635578 ZFATQ9P243 1243 aa2.76□□□□□ -1.97
SMARCB1-209ENST00000635578 KIAA1324LA8MWY0 1029 aaPredicted RBP2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 ZBTB42B2RXF5 422 aa2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 F8W735 103 aaPredicted RBP2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 IGLV1-40P01703 118 aa2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 RARAP10276 462 aa2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 SOX11P35716 441 aa2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 CLDN10P78369 228 aa2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 PCSK7Q16549 785 aa2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 DHX32Q7L7V1 743 aaKnown RBP2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 TRIM50Q86XT4 487 aa2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 GAS2L2Q8NHY3 880 aa2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 ZNF594Q96JF6 807 aaPredicted RBP2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 MRPL18Q9H0U6 180 aaKnown RBP2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 STOML1Q9UBI4 398 aa2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 RAXQ9Y2V3 346 aa2.75□□□□□ -1.97
SMARCB1-209ENST00000635578 C21orf2O43822 256 aa2.74□□□□□ -1.97
SMARCB1-209ENST00000635578 LGR5O75473 907 aa2.74□□□□□ -1.97
SMARCB1-209ENST00000635578 SASH3O75995 380 aa2.74□□□□□ -1.97
SMARCB1-209ENST00000635578 MAP3K6O95382 1288 aa2.74□□□□□ -1.97
SMARCB1-209ENST00000635578 RASA1P20936 1047 aa2.74□□□□□ -1.97
SMARCB1-209ENST00000635578 TARSP26639 723 aaKnown RBP2.74□□□□□ -1.97
SMARCB1-209ENST00000635578 HIF1AQ16665 826 aa2.74□□□□□ -1.97
SMARCB1-209ENST00000635578 TRPM4Q8TD43 1214 aa2.74□□□□□ -1.97
SMARCB1-209ENST00000635578 SCG3Q8WXD2 468 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms