RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 DNM1Q05193 864 aaKnown RBP12.8□□□□□ -0.36
PSPC1-207ENST00000635251 CREB3L3Q68CJ9 461 aa12.8□□□□□ -0.36
PSPC1-207ENST00000635251 EAF2Q96CJ1 260 aaPredicted RBP12.8□□□□□ -0.36
PSPC1-207ENST00000635251 CHD2O14647 1828 aaKnown RBP12.8□□□□□ -0.36
PSPC1-207ENST00000635251 HCLS1P14317 486 aaPredicted RBP12.79□□□□□ -0.36
PSPC1-207ENST00000635251 NEXNQ0ZGT2 675 aa12.79□□□□□ -0.36
PSPC1-207ENST00000635251 ME3Q16798 604 aa12.79□□□□□ -0.36
PSPC1-207ENST00000635251 NECAB1Q8N987 351 aa12.79□□□□□ -0.36
PSPC1-207ENST00000635251 KCNB2Q92953 911 aa12.79□□□□□ -0.36
PSPC1-207ENST00000635251 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
PSPC1-207ENST00000635251 USP25Q9UHP3 1055 aa12.79□□□□□ -0.36
PSPC1-207ENST00000635251 MTMR6Q9Y217 621 aa12.79□□□□□ -0.36
PSPC1-207ENST00000635251 HEG1Q9ULI3 1381 aa12.79□□□□□ -0.36
PSPC1-207ENST00000635251 MYL6BP14649 208 aa12.79□□□□□ -0.36
PSPC1-207ENST00000635251 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
PSPC1-207ENST00000635251 TLR7Q9NYK1 1049 aaKnown RBP12.79□□□□□ -0.36
PSPC1-207ENST00000635251 PHRF1Q9P1Y6 1649 aaKnown RBP12.79□□□□□ -0.36
PSPC1-207ENST00000635251 RNF20Q5VTR2 975 aa12.78□□□□□ -0.36
PSPC1-207ENST00000635251 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
PSPC1-207ENST00000635251 MAP4K1Q92918 833 aa12.78□□□□□ -0.36
PSPC1-207ENST00000635251 KAZALD1Q96I82 304 aa12.78□□□□□ -0.36
PSPC1-207ENST00000635251 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.78□□□□□ -0.36
PSPC1-207ENST00000635251 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.78□□□□□ -0.36
PSPC1-207ENST00000635251 UTYO14607 1347 aa12.78□□□□□ -0.36
PSPC1-207ENST00000635251 SLC27A2O14975 620 aa12.78□□□□□ -0.36
PSPC1-207ENST00000635251 KIAA2012Q0VF49 1180 aa12.78□□□□□ -0.36
PSPC1-207ENST00000635251 SLC39A6Q13433 755 aa12.78□□□□□ -0.36
PSPC1-207ENST00000635251 LARP1BQ659C4 914 aaKnown RBP12.78□□□□□ -0.36
PSPC1-207ENST00000635251 KLHDC4Q8TBB5 520 aa12.78□□□□□ -0.36
PSPC1-207ENST00000635251 AXIN2Q9Y2T1 843 aa12.78□□□□□ -0.36
PSPC1-207ENST00000635251 PLCB2Q00722 1185 aa12.77□□□□□ -0.36
PSPC1-207ENST00000635251 GIMAP6Q6P9H5 292 aa12.77□□□□□ -0.36
PSPC1-207ENST00000635251 BLOC1S2Q6QNY1 142 aa12.77□□□□□ -0.36
PSPC1-207ENST00000635251 MPNDQ8N594 471 aa12.77□□□□□ -0.36
PSPC1-207ENST00000635251 TPCN1Q9ULQ1 816 aa12.77□□□□□ -0.36
PSPC1-207ENST00000635251 A0A0D9SFI3 127 aa12.77□□□□□ -0.37
PSPC1-207ENST00000635251 ADCY5O95622 1261 aa12.77□□□□□ -0.37
PSPC1-207ENST00000635251 IGKV5-2P06315 115 aa12.77□□□□□ -0.37
PSPC1-207ENST00000635251 ST3GAL1Q11201 340 aa12.77□□□□□ -0.37
PSPC1-207ENST00000635251 MYD88Q99836 296 aa12.77□□□□□ -0.37
PSPC1-207ENST00000635251 TCHHQ07283 1943 aa12.76□□□□□ -0.37
PSPC1-207ENST00000635251 UQCRHLA0A096LP55 91 aa12.76□□□□□ -0.37
PSPC1-207ENST00000635251 UQCRHP07919 91 aa12.76□□□□□ -0.37
PSPC1-207ENST00000635251 PDIA6Q15084 440 aa12.76□□□□□ -0.37
PSPC1-207ENST00000635251 ANKRD1Q15327 319 aa12.76□□□□□ -0.37
PSPC1-207ENST00000635251 DNTTIP2Q5QJE6 756 aaKnown RBP12.76□□□□□ -0.37
PSPC1-207ENST00000635251 ZNF790Q6PG37 636 aa12.76□□□□□ -0.37
PSPC1-207ENST00000635251 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
PSPC1-207ENST00000635251 SLIT3O75094 1523 aa12.76□□□□□ -0.37
PSPC1-207ENST00000635251 NEURL1BA8MQ27 555 aa12.76□□□□□ -0.37
PSPC1-207ENST00000635251 ZC3H6P61129 1189 aaKnown RBP12.76□□□□□ -0.37
PSPC1-207ENST00000635251 RBM10P98175 930 aaKnown RBP12.76□□□□□ -0.37
PSPC1-207ENST00000635251 KRT28Q7Z3Y7 464 aa12.76□□□□□ -0.37
PSPC1-207ENST00000635251 XAGE3Q8WTP9 111 aa12.76□□□□□ -0.37
PSPC1-207ENST00000635251 TCEANC2Q96MN5 208 aa12.76□□□□□ -0.37
PSPC1-207ENST00000635251 KRT85P78386 507 aa12.75□□□□□ -0.37
PSPC1-207ENST00000635251 GCKRQ14397 625 aa12.75□□□□□ -0.37
PSPC1-207ENST00000635251 COPS6Q7L5N1 327 aa12.75□□□□□ -0.37
PSPC1-207ENST00000635251 FERMT3Q86UX7 667 aa12.75□□□□□ -0.37
PSPC1-207ENST00000635251 NLRP2Q9NX02 1062 aa12.75□□□□□ -0.37
PSPC1-207ENST00000635251 PDCP20941 246 aa12.74□□□□□ -0.37
PSPC1-207ENST00000635251 ZNF830Q96NB3 372 aaPredicted RBP12.74□□□□□ -0.37
PSPC1-207ENST00000635251 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
PSPC1-207ENST00000635251 KDM4AO75164 1064 aa12.74□□□□□ -0.37
PSPC1-207ENST00000635251 PDIA4P13667 645 aaKnown RBP12.74□□□□□ -0.37
PSPC1-207ENST00000635251 RPS6KB1P23443 525 aa12.74□□□□□ -0.37
PSPC1-207ENST00000635251 STK3Q13188 491 aa12.74□□□□□ -0.37
PSPC1-207ENST00000635251 SASS6Q6UVJ0 657 aa12.74□□□□□ -0.37
PSPC1-207ENST00000635251 METTL22Q9BUU2 404 aaPredicted RBP12.74□□□□□ -0.37
PSPC1-207ENST00000635251 PDCL3Q9H2J4 239 aa12.74□□□□□ -0.37
PSPC1-207ENST00000635251 CHMP3Q9Y3E7 222 aa12.74□□□□□ -0.37
PSPC1-207ENST00000635251 TATP17735 454 aaPredicted RBP12.73□□□□□ -0.37
PSPC1-207ENST00000635251 EPHA10Q5JZY3 1008 aa12.73□□□□□ -0.37
PSPC1-207ENST00000635251 CDC37L1Q7L3B6 337 aa12.73□□□□□ -0.37
PSPC1-207ENST00000635251 NFATC2IPQ8NCF5 419 aa12.73□□□□□ -0.37
PSPC1-207ENST00000635251 JARID2Q92833 1246 aaPredicted RBP12.73□□□□□ -0.37
PSPC1-207ENST00000635251 SNRKQ9NRH2 765 aa12.73□□□□□ -0.37
PSPC1-207ENST00000635251 HMG20BQ9P0W2 317 aa12.73□□□□□ -0.37
PSPC1-207ENST00000635251 ERBB3P21860 1342 aa12.73□□□□□ -0.37
PSPC1-207ENST00000635251 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
PSPC1-207ENST00000635251 ANKRD13DQ6ZTN6 518 aa12.73□□□□□ -0.37
PSPC1-207ENST00000635251 ZNF589Q86UQ0 364 aaPredicted RBP12.73□□□□□ -0.37
PSPC1-207ENST00000635251 TTC5Q8N0Z6 440 aa12.73□□□□□ -0.37
PSPC1-207ENST00000635251 EDC3Q96F86 508 aaKnown RBP12.73□□□□□ -0.37
PSPC1-207ENST00000635251 FUCA2Q9BTY2 467 aa12.73□□□□□ -0.37
PSPC1-207ENST00000635251 FAM13BQ9NYF5 915 aa12.73□□□□□ -0.37
PSPC1-207ENST00000635251 MED23Q9ULK4 1368 aa12.73□□□□□ -0.37
PSPC1-207ENST00000635251 CCDC192P0DO97 292 aa12.72□□□□□ -0.37
PSPC1-207ENST00000635251 COL9A3Q14050 684 aaPredicted RBP12.72□□□□□ -0.37
PSPC1-207ENST00000635251 NPHP3Q7Z494 1330 aa12.72□□□□□ -0.37
PSPC1-207ENST00000635251 SIPA1L3O60292 1781 aaPredicted RBP12.72□□□□□ -0.37
PSPC1-207ENST00000635251 NPHP4O75161 1426 aaPredicted RBP12.72□□□□□ -0.37
PSPC1-207ENST00000635251 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
PSPC1-207ENST00000635251 FAM173BQ6P4H8 233 aa12.72□□□□□ -0.37
PSPC1-207ENST00000635251 TTC6Q86TZ1 520 aa12.72□□□□□ -0.37
PSPC1-207ENST00000635251 DNAJC2Q99543 621 aaKnown RBP12.72□□□□□ -0.37
PSPC1-207ENST00000635251 TTC12Q9H892 705 aaPredicted RBP12.72□□□□□ -0.37
PSPC1-207ENST00000635251 TAF6LQ9Y6J9 622 aa12.72□□□□□ -0.37
PSPC1-207ENST00000635251 CAMTA1Q9Y6Y1 1673 aa12.71□□□□□ -0.37
PSPC1-207ENST00000635251 CSB-PGBD3P0DP91 1061 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms