RNA–Protein interactions for RNA: ENST00000630077.2

SYNJ1-211, Transcript of synaptojanin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNJ1, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ1-211ENST00000630077 PRDM11Q9NQV5 511 aa10.91□□□□□ -0.66
SYNJ1-211ENST00000630077 POLD1P28340 1107 aa10.91□□□□□ -0.66
SYNJ1-211ENST00000630077 SPTY2D1Q68D10 685 aaPredicted RBP10.91□□□□□ -0.66
SYNJ1-211ENST00000630077 AEBP1Q8IUX7 1158 aa10.91□□□□□ -0.66
SYNJ1-211ENST00000630077 RAB3IPQ96QF0 476 aaPredicted RBP10.91□□□□□ -0.66
SYNJ1-211ENST00000630077 PLVAPQ9BX97 442 aa10.91□□□□□ -0.66
SYNJ1-211ENST00000630077 CDC45O75419 566 aa10.91□□□□□ -0.66
SYNJ1-211ENST00000630077 LMOD1P29536 600 aaPredicted RBP10.91□□□□□ -0.66
SYNJ1-211ENST00000630077 PAFAH1B1P43034 410 aa10.91□□□□□ -0.66
SYNJ1-211ENST00000630077 TSPY26PQ9H489 355 aa10.91□□□□□ -0.66
SYNJ1-211ENST00000630077 CEP126Q9P2H0 1117 aa10.91□□□□□ -0.66
SYNJ1-211ENST00000630077 USO1O60763 962 aaKnown RBP10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 CCDC160A6NGH7 325 aa10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 C11orf95C9JLR9 678 aaPredicted RBP10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 SPOUT1Q5T280 376 aaKnown RBP10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 TSR2Q969E8 191 aaKnown RBP10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 TXNDC16Q9P2K2 825 aa10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 KDM5DQ9BY66 1539 aa10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 WDR46O15213 610 aaKnown RBP10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 HLA-DOAP06340 250 aa10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 TDRD12Q587J7 1177 aaKnown RBP10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 GTF3C6Q969F1 213 aa10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 SLC52A1Q9NWF4 448 aa10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 ATP10AO60312 1499 aa10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 ERCC5P28715 1186 aaPredicted RBP10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 MCM2P49736 904 aa10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 ATRIPQ8WXE1 791 aa10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 IMPG2Q9BZV3 1241 aa10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 SSFA2P28290 1259 aa10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 NAA15Q9BXJ9 866 aaKnown RBP10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 PHAXQ9H814 394 aaKnown RBP10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 FEZ2Q9UHY8 353 aaPredicted RBP10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 CYP46A1Q9Y6A2 500 aa10.9□□□□□ -0.66
SYNJ1-211ENST00000630077 STK3Q13188 491 aa10.9□□□□□ -0.67
SYNJ1-211ENST00000630077 ZNF622Q969S3 477 aaKnown RBP eCLIP10.9□□□□□ -0.675e-6■■■□□ 15.6
SYNJ1-211ENST00000630077 TNMDQ9H2S6 317 aa10.9□□□□□ -0.67
SYNJ1-211ENST00000630077 C6orf229H3BNL8 230 aa10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 TCERG1LQ5VWI1 586 aa10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 SEPT8Q92599 483 aa10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 ZNF428Q96B54 188 aa10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 PDZRN3Q9UPQ7 1066 aa10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 MBD3O95983 291 aa10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 CCDC172P0C7W6 258 aa10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 GTF2F1P35269 517 aaKnown RBP eCLIP10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 ATP2B3Q16720 1220 aa10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 SMC6Q96SB8 1091 aa10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 PRPF4BQ13523 1007 aaKnown RBP10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 IDH1O75874 414 aaKnown RBP10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 BRDTQ58F21 947 aaPredicted RBP10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 MSANTD4Q8NCY6 345 aa10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 HAUS2Q9NVX0 235 aa10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 FAM169AQ9Y6X4 670 aa10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 RPGRIP1LQ68CZ1 1315 aa10.89□□□□□ -0.67
SYNJ1-211ENST00000630077 IFIT1P09914 478 aaKnown RBP10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 CCDC192P0DO97 292 aa10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 TRAF1Q13077 416 aa10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 TCP11L2Q8N4U5 519 aa10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 CTCFLQ8NI51 663 aaPredicted RBP10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 PNISRQ8TF01 805 aaKnown RBP10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 HECW2Q9P2P5 1572 aa10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 RNF214Q8ND24 703 aa10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 SPC25Q9HBM1 224 aa10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 KCNA4P22459 653 aa10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 CLGNO14967 610 aa10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 GABPAQ06546 454 aa10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 SPC24Q8NBT2 197 aa10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 NACA2Q9H009 215 aa10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 KIF3CO14782 793 aa10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 ECM2O94769 699 aaPredicted RBP10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 GEN1Q17RS7 908 aa10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 NOB1Q9ULX3 412 aaKnown RBP10.88□□□□□ -0.67
SYNJ1-211ENST00000630077 DNA2P51530 1060 aa10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 CCDC12Q8WUD4 166 aaPredicted RBP10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 SIL1Q9H173 461 aa10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 FIBPO43427 364 aa10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 EXOSC9Q06265 439 aaKnown RBP10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 FAM200AQ8TCP9 573 aa10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 TACC3Q9Y6A5 838 aa10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 DNAJC5Q9H3Z4 198 aa10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 HLTFQ14527 1009 aaKnown RBP eCLIP10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 FAM114A1Q8IWE2 563 aa10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 TBC1D5Q92609 795 aa10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 MINDY4BA8MYZ0 360 aa10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 NBPF14Q5TI25 921 aa10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 CALML4Q96GE6 196 aa10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.87□□□□□ -0.67
SYNJ1-211ENST00000630077 DPH6Q7L8W6 267 aa10.86□□□□□ -0.67
SYNJ1-211ENST00000630077 GPHNQ9NQX3 736 aaPredicted RBP10.86□□□□□ -0.67
SYNJ1-211ENST00000630077 KDM6BO15054 1643 aa10.86□□□□□ -0.67
SYNJ1-211ENST00000630077 A0A087WZG4 1122 aa10.86□□□□□ -0.67
SYNJ1-211ENST00000630077 CCDC196A0A1B0GTZ2 297 aa10.86□□□□□ -0.67
SYNJ1-211ENST00000630077 CCDC40Q4G0X9 1142 aa10.86□□□□□ -0.67
SYNJ1-211ENST00000630077 MCM10Q7L590 875 aa10.86□□□□□ -0.67
SYNJ1-211ENST00000630077 GABPB2Q8TAK5 448 aaPredicted RBP10.86□□□□□ -0.67
SYNJ1-211ENST00000630077 CCDC77Q9BR77 488 aa10.86□□□□□ -0.67
SYNJ1-211ENST00000630077 GIPC1O14908 333 aa10.86□□□□□ -0.67
SYNJ1-211ENST00000630077 MYL6BP14649 208 aa10.86□□□□□ -0.67
SYNJ1-211ENST00000630077 DDX11Q96FC9 970 aa10.86□□□□□ -0.67
SYNJ1-211ENST00000630077 EPSTI1Q96J88 318 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms