RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 LMBR1LQ6UX01 489 aa14.42□□□□□ -0.1
CCDC163-201ENST00000625766 DZIP3Q86Y13 1208 aaKnown RBP14.42□□□□□ -0.1
CCDC163-201ENST00000625766 QTRT2Q9H974 415 aaKnown RBP14.42□□□□□ -0.1
CCDC163-201ENST00000625766 ZNF330Q9Y3S2 320 aaPredicted RBP14.42□□□□□ -0.1
CCDC163-201ENST00000625766 TJP1Q07157 1748 aa14.42□□□□□ -0.1
CCDC163-201ENST00000625766 TTC41PQ6P2S7 1318 aa14.42□□□□□ -0.1
CCDC163-201ENST00000625766 CICQ96RK0 1608 aaPredicted RBP14.42□□□□□ -0.1
CCDC163-201ENST00000625766 C22orf23Q9BZE7 217 aa14.42□□□□□ -0.1
CCDC163-201ENST00000625766 RBM25P49756 843 aaKnown RBP14.41□□□□□ -0.1
CCDC163-201ENST00000625766 NLRP10Q86W26 655 aa14.41□□□□□ -0.1
CCDC163-201ENST00000625766 ZNF34Q8IZ26 560 aa14.41□□□□□ -0.1
CCDC163-201ENST00000625766 A0A0G2JS52 829 aa14.4□□□□□ -0.1
CCDC163-201ENST00000625766 CSF1RP07333 972 aa14.4□□□□□ -0.1
CCDC163-201ENST00000625766 MFAP1P55081 439 aaKnown RBP14.4□□□□□ -0.1
CCDC163-201ENST00000625766 MYT1Q01538 1121 aa14.4□□□□□ -0.1
CCDC163-201ENST00000625766 NUTM1Q86Y26 1132 aa14.4□□□□□ -0.1
CCDC163-201ENST00000625766 SEPT12Q8IYM1 358 aa14.4□□□□□ -0.1
CCDC163-201ENST00000625766 BCL11AQ9H165 835 aa14.4□□□□□ -0.1
CCDC163-201ENST00000625766 ZNF831Q5JPB2 1677 aa14.4□□□□□ -0.1
CCDC163-201ENST00000625766 CDHR2Q9BYE9 1310 aa14.4□□□□□ -0.1
CCDC163-201ENST00000625766 RGL2O15211 777 aa14.4□□□□□ -0.1
CCDC163-201ENST00000625766 RC3H1Q5TC82 1133 aaKnown RBP14.4□□□□□ -0.1
CCDC163-201ENST00000625766 PI4K2BQ8TCG2 481 aa14.4□□□□□ -0.1
CCDC163-201ENST00000625766 TBC1D2BQ9UPU7 963 aa14.4□□□□□ -0.1
CCDC163-201ENST00000625766 AFDNP55196 1824 aaKnown RBP14.39□□□□□ -0.11
CCDC163-201ENST00000625766 CASC1Q6TDU7 716 aa14.39□□□□□ -0.11
CCDC163-201ENST00000625766 ARXQ96QS3 562 aa14.39□□□□□ -0.11
CCDC163-201ENST00000625766 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
CCDC163-201ENST00000625766 ERC2O15083 957 aa14.38□□□□□ -0.11
CCDC163-201ENST00000625766 IFIT2P09913 472 aaKnown RBP14.38□□□□□ -0.11
CCDC163-201ENST00000625766 PTF1AQ7RTS3 328 aa14.38□□□□□ -0.11
CCDC163-201ENST00000625766 KLHDC4Q8TBB5 520 aa14.38□□□□□ -0.11
CCDC163-201ENST00000625766 EAF2Q96CJ1 260 aaPredicted RBP14.38□□□□□ -0.11
CCDC163-201ENST00000625766 GLRX3O76003 335 aaKnown RBP14.37□□□□□ -0.11
CCDC163-201ENST00000625766 CAMTA2O94983 1202 aa14.37□□□□□ -0.11
CCDC163-201ENST00000625766 CLEC4GQ6UXB4 293 aa14.37□□□□□ -0.11
CCDC163-201ENST00000625766 FAM89AQ96GI7 184 aa14.37□□□□□ -0.11
CCDC163-201ENST00000625766 AK7Q96M32 723 aa14.37□□□□□ -0.11
CCDC163-201ENST00000625766 ECHDC1Q9NTX5 307 aa14.37□□□□□ -0.11
CCDC163-201ENST00000625766 RREB1Q92766 1687 aa14.37□□□□□ -0.11
CCDC163-201ENST00000625766 CNTNAP4Q9C0A0 1308 aa14.37□□□□□ -0.11
CCDC163-201ENST00000625766 TSHZ3Q63HK5 1081 aa14.37□□□□□ -0.11
CCDC163-201ENST00000625766 LINC00116Q8NCU8 138 aa14.37□□□□□ -0.11
CCDC163-201ENST00000625766 GPR108Q9NPR9 543 aa14.37□□□□□ -0.11
CCDC163-201ENST00000625766 CIAO1O76071 339 aa14.36□□□□□ -0.11
CCDC163-201ENST00000625766 RTL5Q5HYW3 569 aaPredicted RBP14.36□□□□□ -0.11
CCDC163-201ENST00000625766 AACSQ86V21 672 aa14.36□□□□□ -0.11
CCDC163-201ENST00000625766 GPATCH3Q96I76 525 aa14.36□□□□□ -0.11
CCDC163-201ENST00000625766 SIL1Q9H173 461 aa14.36□□□□□ -0.11
CCDC163-201ENST00000625766 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.36□□□□□ -0.11
CCDC163-201ENST00000625766 IL15P40933 162 aaPredicted RBP14.35□□□□□ -0.11
CCDC163-201ENST00000625766 PARP10Q53GL7 1025 aa14.35□□□□□ -0.11
CCDC163-201ENST00000625766 ATG9AQ7Z3C6 839 aa14.35□□□□□ -0.11
CCDC163-201ENST00000625766 BCL11BQ9C0K0 894 aaPredicted RBP14.35□□□□□ -0.11
CCDC163-201ENST00000625766 GPTP24298 496 aa14.35□□□□□ -0.11
CCDC163-201ENST00000625766 CHMLP26374 656 aa14.35□□□□□ -0.11
CCDC163-201ENST00000625766 USP26Q9BXU7 913 aa14.35□□□□□ -0.11
CCDC163-201ENST00000625766 TRMT112Q9UI30 125 aaKnown RBP14.35□□□□□ -0.11
CCDC163-201ENST00000625766 MYH14Q7Z406 1995 aaKnown RBP14.34□□□□□ -0.11
CCDC163-201ENST00000625766 TRIM6-TRIM34B2RNG4 842 aa14.34□□□□□ -0.11
CCDC163-201ENST00000625766 EYA2O00167 538 aa14.34□□□□□ -0.11
CCDC163-201ENST00000625766 CCDC57Q2TAC2 916 aa14.34□□□□□ -0.11
CCDC163-201ENST00000625766 EPB41L2O43491 1005 aaKnown RBP14.34□□□□□ -0.11
CCDC163-201ENST00000625766 RPS6KA4O75676 772 aa14.34□□□□□ -0.11
CCDC163-201ENST00000625766 TFCP2Q12800 502 aa14.34□□□□□ -0.11
CCDC163-201ENST00000625766 TNNI3KQ59H18 835 aa14.34□□□□□ -0.11
CCDC163-201ENST00000625766 FAM182BQ5T319 152 aa14.34□□□□□ -0.11
CCDC163-201ENST00000625766 TTLL11Q8NHH1 800 aa14.34□□□□□ -0.11
CCDC163-201ENST00000625766 RILPL2Q969X0 211 aa14.34□□□□□ -0.11
CCDC163-201ENST00000625766 CHMP3Q9Y3E7 222 aa14.34□□□□□ -0.11
CCDC163-201ENST00000625766 FPGT-TNNI3KV9GXZ4 949 aa14.34□□□□□ -0.11
CCDC163-201ENST00000625766 UBN2Q6ZU65 1347 aa14.33□□□□□ -0.12
CCDC163-201ENST00000625766 IRS4O14654 1257 aaPredicted RBP14.33□□□□□ -0.12
CCDC163-201ENST00000625766 PDE8AO60658 829 aa14.33□□□□□ -0.12
CCDC163-201ENST00000625766 REC8O95072 547 aa14.33□□□□□ -0.12
CCDC163-201ENST00000625766 FAM196AQ6ZSG2 479 aa14.33□□□□□ -0.12
CCDC163-201ENST00000625766 CNTROBQ8N137 903 aa14.33□□□□□ -0.12
CCDC163-201ENST00000625766 CCDC8Q9H0W5 538 aaPredicted RBP14.33□□□□□ -0.12
CCDC163-201ENST00000625766 BECN1Q14457 450 aa14.32□□□□□ -0.12
CCDC163-201ENST00000625766 SUSD4Q5VX71 490 aa14.32□□□□□ -0.12
CCDC163-201ENST00000625766 SYNE4Q8N205 404 aa14.32□□□□□ -0.12
CCDC163-201ENST00000625766 ZNF652Q9Y2D9 606 aa14.32□□□□□ -0.12
CCDC163-201ENST00000625766 NHSQ6T4R5 1651 aa14.32□□□□□ -0.12
CCDC163-201ENST00000625766 NUP98P52948 1817 aa14.32□□□□□ -0.12
CCDC163-201ENST00000625766 HSP90B1P14625 803 aaKnown RBP14.32□□□□□ -0.12
CCDC163-201ENST00000625766 IFIT5Q13325 482 aaKnown RBP14.32□□□□□ -0.12
CCDC163-201ENST00000625766 ZNF772Q68DY9 489 aaPredicted RBP14.32□□□□□ -0.12
CCDC163-201ENST00000625766 ESYT1Q9BSJ8 1104 aa14.32□□□□□ -0.12
CCDC163-201ENST00000625766 UTP14AQ9BVJ6 771 aaKnown RBP14.32□□□□□ -0.12
CCDC163-201ENST00000625766 CCNL1Q9UK58 526 aaPredicted RBP14.32□□□□□ -0.12
CCDC163-201ENST00000625766 ATP5JP18859 108 aa14.31□□□□□ -0.12
CCDC163-201ENST00000625766 COL5A3P25940 1745 aaPredicted RBP14.31□□□□□ -0.12
CCDC163-201ENST00000625766 EVI5LQ96CN4 794 aa14.31□□□□□ -0.12
CCDC163-201ENST00000625766 KIF2CQ99661 725 aa14.31□□□□□ -0.12
CCDC163-201ENST00000625766 DAXXQ9UER7 740 aaPredicted RBP14.31□□□□□ -0.12
CCDC163-201ENST00000625766 CTSWP56202 376 aa14.3□□□□□ -0.12
CCDC163-201ENST00000625766 KRT27Q7Z3Y8 459 aa14.3□□□□□ -0.12
CCDC163-201ENST00000625766 TUBGCP6Q96RT7 1819 aa14.3□□□□□ -0.12
CCDC163-201ENST00000625766 SH3TC1Q8TE82 1336 aa14.3□□□□□ -0.12
CCDC163-201ENST00000625766 RBM6P78332 1123 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms