RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 AOX1Q06278 1338 aa22.63■■□□□ 1.21
PCDHB2-202ENST00000622947 PTPN12Q05209 780 aaKnown RBP22.63■■□□□ 1.21
PCDHB2-202ENST00000622947 DAXXQ9UER7 740 aaPredicted RBP22.63■■□□□ 1.21
PCDHB2-202ENST00000622947 USP21Q9UK80 565 aa22.63■■□□□ 1.21
PCDHB2-202ENST00000622947 MYH14Q7Z406 1995 aaKnown RBP22.62■■□□□ 1.21
PCDHB2-202ENST00000622947 MAP3K15Q6ZN16 1313 aa22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 LMBR1LQ6UX01 489 aa22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 USP42Q9H9J4 1324 aaKnown RBP22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 G3BP1Q13283 466 aaKnown RBP eCLIP22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 ERC1Q8IUD2 1116 aa22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 ARXQ96QS3 562 aa22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 TBC1D2Q9BYX2 928 aa22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 COPRSQ9NQ92 184 aa22.61■■□□□ 1.21
PCDHB2-202ENST00000622947 MAP4K4O95819 1239 aaPredicted RBP22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 ITPK1Q13572 414 aa22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 KIF6Q6ZMV9 814 aa22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 PTF1AQ7RTS3 328 aa22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 CLASRPQ8N2M8 674 aaKnown RBP22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 EAF2Q96CJ1 260 aaPredicted RBP22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 NUP98P52948 1817 aa22.6■■□□□ 1.21
PCDHB2-202ENST00000622947 LOC102724428A0A0B4J2F2 783 aa22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 SIK1P57059 783 aa22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 INTS5Q6P9B9 1019 aaKnown RBP22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 RILPL2Q969X0 211 aa22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 AK9Q5TCS8 1911 aa22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 TRIM6-TRIM34B2RNG4 842 aa22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 TRIM28Q13263 835 aaKnown RBP22.59■■□□□ 1.21
PCDHB2-202ENST00000622947 ATP6V1AP38606 617 aa22.58■■□□□ 1.21
PCDHB2-202ENST00000622947 GIGYF2Q6Y7W6 1299 aaKnown RBP22.58■■□□□ 1.21
PCDHB2-202ENST00000622947 USP26Q9BXU7 913 aa22.58■■□□□ 1.21
PCDHB2-202ENST00000622947 PALLDQ8WX93 1383 aa22.58■■□□□ 1.2
PCDHB2-202ENST00000622947 THSD7AQ9UPZ6 1657 aa22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 AACSQ86V21 672 aa22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 TLR7Q9NYK1 1049 aaKnown RBP22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 CHMLP26374 656 aa22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 IL6STP40189 918 aaPredicted RBP22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 SYNE4Q8N205 404 aa22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 TBC1D2BQ9UPU7 963 aa22.57■■□□□ 1.2
PCDHB2-202ENST00000622947 ANKRD36CQ5JPF3 1778 aa22.56■■□□□ 1.2
PCDHB2-202ENST00000622947 CCDC8Q9H0W5 538 aaPredicted RBP22.56■■□□□ 1.2
PCDHB2-202ENST00000622947 CICQ96RK0 1608 aaPredicted RBP22.56■■□□□ 1.2
PCDHB2-202ENST00000622947 RREB1Q92766 1687 aa22.56■■□□□ 1.2
PCDHB2-202ENST00000622947 GPTP24298 496 aa22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 CRKLP46109 303 aaKnown RBP22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 EIF5P55010 431 aaKnown RBP22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 FAM182BQ5T319 152 aa22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 FAM89AQ96GI7 184 aa22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 IL25Q9H293 177 aa22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 TTC41PQ6P2S7 1318 aa22.55■■□□□ 1.2
PCDHB2-202ENST00000622947 IFIT2P09913 472 aaKnown RBP22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 CASC1Q6TDU7 716 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 BECN1Q14457 450 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 DZIP3Q86Y13 1208 aaKnown RBP22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 ZMYND15Q9H091 742 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 ECHDC1Q9NTX5 307 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 CCDC87Q9NVE4 849 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 CHMP3Q9Y3E7 222 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 EP400Q96L91 3159 aa22.54■■□□□ 1.2
PCDHB2-202ENST00000622947 ERC2O15083 957 aa22.53■■□□□ 1.2
PCDHB2-202ENST00000622947 NLRP10Q86W26 655 aa22.53■■□□□ 1.2
PCDHB2-202ENST00000622947 ESYT1Q9BSJ8 1104 aa22.53■■□□□ 1.2
PCDHB2-202ENST00000622947 TFCP2Q12800 502 aa22.53■■□□□ 1.2
PCDHB2-202ENST00000622947 COL5A3P25940 1745 aaPredicted RBP22.52■■□□□ 1.2
PCDHB2-202ENST00000622947 PCCAP05165 728 aaPredicted RBP22.52■■□□□ 1.2
PCDHB2-202ENST00000622947 KCNQ4P56696 695 aa22.52■■□□□ 1.2
PCDHB2-202ENST00000622947 AFF2P51816 1311 aa22.52■■□□□ 1.2
PCDHB2-202ENST00000622947 GLRX3O76003 335 aaKnown RBP22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 MEX3CQ5U5Q3 659 aaKnown RBP22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 ATG9AQ7Z3C6 839 aa22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 ZBTB38Q8NAP3 1195 aaPredicted RBP22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 ZNF594Q96JF6 807 aaPredicted RBP22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 GJD4Q96KN9 370 aaPredicted RBP22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 UBN2Q6ZU65 1347 aa22.51■■□□□ 1.19
PCDHB2-202ENST00000622947 ERVV-1B6SEH8 477 aa22.5■■□□□ 1.19
PCDHB2-202ENST00000622947 CD2BP2O95400 341 aaKnown RBP22.5■■□□□ 1.19
PCDHB2-202ENST00000622947 SMARCC1Q92922 1105 aaPredicted RBP22.49■■□□□ 1.19
PCDHB2-202ENST00000622947 TNNI3KQ59H18 835 aa22.49■■□□□ 1.19
PCDHB2-202ENST00000622947 FPGT-TNNI3KV9GXZ4 949 aa22.49■■□□□ 1.19
PCDHB2-202ENST00000622947 BTAF1O14981 1849 aa22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 FRAT2O75474 233 aaPredicted RBP22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 REC8O95072 547 aa22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 LRRC24Q50LG9 513 aa22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 ZNF34Q8IZ26 560 aa22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 LINC00116Q8NCU8 138 aa22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 CCDC85AQ96PX6 553 aaPredicted RBP22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 PLA2G12BQ9BX93 195 aa22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 DBNLQ9UJU6 430 aaKnown RBP22.48■■□□□ 1.19
PCDHB2-202ENST00000622947 HSP90AB3PQ58FF7 597 aa22.47■■□□□ 1.19
PCDHB2-202ENST00000622947 CNTROBQ8N137 903 aa22.47■■□□□ 1.19
PCDHB2-202ENST00000622947 PUS3Q9BZE2 481 aaKnown RBP22.47■■□□□ 1.19
PCDHB2-202ENST00000622947 ZNF831Q5JPB2 1677 aa22.47■■□□□ 1.19
PCDHB2-202ENST00000622947 CSF1RP07333 972 aa22.46■■□□□ 1.19
PCDHB2-202ENST00000622947 CAMTA2O94983 1202 aa22.46■■□□□ 1.19
PCDHB2-202ENST00000622947 SNX21Q969T3 373 aa22.46■■□□□ 1.19
PCDHB2-202ENST00000622947 GPATCH3Q96I76 525 aa22.46■■□□□ 1.19
PCDHB2-202ENST00000622947 MYH3P11055 1940 aa22.45■■□□□ 1.19
PCDHB2-202ENST00000622947 CDHR2Q9BYE9 1310 aa22.45■■□□□ 1.18
PCDHB2-202ENST00000622947 ATRNO75882 1429 aa22.45■■□□□ 1.18
PCDHB2-202ENST00000622947 RRAGDQ9NQL2 400 aaPredicted RBP22.45■■□□□ 1.18
PCDHB2-202ENST00000622947 NHSQ6T4R5 1651 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms