RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 MAP3K15Q6ZN16 1313 aa8.71□□□□□ -1.02
CBWD3-219ENST00000622817 ARFGEF2Q9Y6D5 1785 aa8.71□□□□□ -1.02
CBWD3-219ENST00000622817 ANKRD45Q5TZF3 282 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 PTF1AQ7RTS3 328 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 BTAF1O14981 1849 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 PNMA6EA0A0J9YXQ4 647 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 ERVV-1B6SEH8 477 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 ATP5J2-PTCD1G3V325 749 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 RXRBP28702 533 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 EIF5P55010 431 aaKnown RBP8.7□□□□□ -1.02
CBWD3-219ENST00000622817 TRIM28Q13263 835 aaKnown RBP8.7□□□□□ -1.02
CBWD3-219ENST00000622817 TCIRG1Q13488 830 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 MTX1Q13505 466 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 HSP90AB3PQ58FF7 597 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 GIGYF2Q6Y7W6 1299 aaKnown RBP8.7□□□□□ -1.02
CBWD3-219ENST00000622817 PPP1R42Q7Z4L9 355 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 CCDC191Q8NCU4 936 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 SSH3Q8TE77 659 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 ARXQ96QS3 562 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 CWC25Q9NXE8 425 aaPredicted RBP8.7□□□□□ -1.02
CBWD3-219ENST00000622817 NUP188Q5SRE5 1749 aa8.7□□□□□ -1.02
CBWD3-219ENST00000622817 A0A087WZG4 1122 aa8.69□□□□□ -1.02
CBWD3-219ENST00000622817 SRGAP3O43295 1099 aa8.69□□□□□ -1.02
CBWD3-219ENST00000622817 DZIP3Q86Y13 1208 aaKnown RBP8.69□□□□□ -1.02
CBWD3-219ENST00000622817 KIF12Q96FN5 646 aa8.69□□□□□ -1.02
CBWD3-219ENST00000622817 ISCA1Q9BUE6 129 aa8.69□□□□□ -1.02
CBWD3-219ENST00000622817 TSHZ2Q9NRE2 1034 aa8.69□□□□□ -1.02
CBWD3-219ENST00000622817 CNTNAP4Q9C0A0 1308 aa8.69□□□□□ -1.02
CBWD3-219ENST00000622817 COL15A1P39059 1388 aa8.69□□□□□ -1.02
CBWD3-219ENST00000622817 RREB1Q92766 1687 aa8.69□□□□□ -1.02
CBWD3-219ENST00000622817 SBF2Q86WG5 1849 aa8.68□□□□□ -1.02
CBWD3-219ENST00000622817 H7C1W4 665 aa8.68□□□□□ -1.02
CBWD3-219ENST00000622817 RC3H1Q5TC82 1133 aaKnown RBP8.68□□□□□ -1.02
CBWD3-219ENST00000622817 UBE3BQ7Z3V4 1068 aa8.68□□□□□ -1.02
CBWD3-219ENST00000622817 LINC00116Q8NCU8 138 aa8.68□□□□□ -1.02
CBWD3-219ENST00000622817 SUCLG2Q96I99 432 aa8.68□□□□□ -1.02
CBWD3-219ENST00000622817 LNPKQ9C0E8 428 aa8.68□□□□□ -1.02
CBWD3-219ENST00000622817 CCNL1Q9UK58 526 aaPredicted RBP8.68□□□□□ -1.02
CBWD3-219ENST00000622817 PDE4AP27815 886 aa8.68□□□□□ -1.02
CBWD3-219ENST00000622817 BICC1Q9H694 974 aaKnown RBP8.68□□□□□ -1.02
CBWD3-219ENST00000622817 TBC1D2BQ9UPU7 963 aa8.68□□□□□ -1.02
CBWD3-219ENST00000622817 AFDNP55196 1824 aaKnown RBP8.67□□□□□ -1.02
CBWD3-219ENST00000622817 RAB11FIP3O75154 756 aa8.67□□□□□ -1.02
CBWD3-219ENST00000622817 COL5A3P25940 1745 aaPredicted RBP8.67□□□□□ -1.02
CBWD3-219ENST00000622817 HMGB2P26583 209 aaKnown RBP8.67□□□□□ -1.02
CBWD3-219ENST00000622817 CASP7P55210 303 aa8.67□□□□□ -1.02
CBWD3-219ENST00000622817 HLFQ16534 295 aa8.67□□□□□ -1.02
CBWD3-219ENST00000622817 HSP90AB4PQ58FF6 505 aa8.67□□□□□ -1.02
CBWD3-219ENST00000622817 BRWD3Q6RI45 1802 aa8.67□□□□□ -1.02
CBWD3-219ENST00000622817 KAZALD1Q96I82 304 aa8.67□□□□□ -1.02
CBWD3-219ENST00000622817 EXOC6BQ9Y2D4 811 aa8.67□□□□□ -1.02
CBWD3-219ENST00000622817 SURF6O75683 361 aaKnown RBP8.66□□□□□ -1.02
CBWD3-219ENST00000622817 PLCB2Q00722 1185 aa8.66□□□□□ -1.02
CBWD3-219ENST00000622817 LRRCC1Q9C099 1032 aa8.66□□□□□ -1.02
CBWD3-219ENST00000622817 NOP58Q9Y2X3 529 aaKnown RBP8.66□□□□□ -1.02
CBWD3-219ENST00000622817 MYH14Q7Z406 1995 aaKnown RBP8.66□□□□□ -1.02
CBWD3-219ENST00000622817 APBB1O00213 710 aa8.66□□□□□ -1.02
CBWD3-219ENST00000622817 RGL2O15211 777 aa8.66□□□□□ -1.02
CBWD3-219ENST00000622817 RPS6KA4O75676 772 aa8.66□□□□□ -1.02
CBWD3-219ENST00000622817 TRIM37O94972 964 aa8.66□□□□□ -1.02
CBWD3-219ENST00000622817 CAMTA2O94983 1202 aa8.66□□□□□ -1.02
CBWD3-219ENST00000622817 PCCAP05165 728 aaPredicted RBP8.66□□□□□ -1.02
CBWD3-219ENST00000622817 KCNQ4P56696 695 aa8.66□□□□□ -1.02
CBWD3-219ENST00000622817 FAM161AQ3B820 660 aa8.66□□□□□ -1.02
CBWD3-219ENST00000622817 RABL6Q3YEC7 729 aaPredicted RBP8.66□□□□□ -1.02
CBWD3-219ENST00000622817 SLC27A3Q5K4L6 730 aa8.66□□□□□ -1.02
CBWD3-219ENST00000622817 NLRP10Q86W26 655 aa8.66□□□□□ -1.02
CBWD3-219ENST00000622817 ZNF652Q9Y2D9 606 aa8.66□□□□□ -1.02
CBWD3-219ENST00000622817 LY75O60449 1722 aa8.65□□□□□ -1.02
CBWD3-219ENST00000622817 EPHA10Q5JZY3 1008 aa8.65□□□□□ -1.02
CBWD3-219ENST00000622817 CLEC4GQ6UXB4 293 aa8.65□□□□□ -1.02
CBWD3-219ENST00000622817 ZNF34Q8IZ26 560 aa8.65□□□□□ -1.02
CBWD3-219ENST00000622817 ZBTB38Q8NAP3 1195 aaPredicted RBP8.65□□□□□ -1.02
CBWD3-219ENST00000622817 JARID2Q92833 1246 aaPredicted RBP8.65□□□□□ -1.02
CBWD3-219ENST00000622817 BACH2Q9BYV9 841 aa8.65□□□□□ -1.02
CBWD3-219ENST00000622817 RGS17Q9UGC6 210 aaPredicted RBP8.65□□□□□ -1.02
CBWD3-219ENST00000622817 SMARCA5O60264 1052 aaPredicted RBP8.64□□□□□ -1.03
CBWD3-219ENST00000622817 GPTP24298 496 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 FOXO4P98177 505 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 OS9Q13438 667 aaPredicted RBP8.64□□□□□ -1.03
CBWD3-219ENST00000622817 PARP10Q53GL7 1025 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 ERC1Q8IUD2 1116 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 CDHR2Q9BYE9 1310 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 NUP98P52948 1817 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 GNPATO15228 680 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 MAP3K13O43283 966 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 G3BP1Q13283 466 aaKnown RBP eCLIP8.64□□□□□ -1.03
CBWD3-219ENST00000622817 ASTLQ6HA08 431 aaPredicted RBP8.64□□□□□ -1.03
CBWD3-219ENST00000622817 POTEAQ6S8J7 498 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 LMBR1LQ6UX01 489 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 PLEKHM2Q8IWE5 1019 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 RHPN1Q8TCX5 695 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 KIF1BPQ96EK5 621 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 PLA2G12BQ9BX93 195 aa8.64□□□□□ -1.03
CBWD3-219ENST00000622817 RTCBQ9Y3I0 505 aaKnown RBP8.64□□□□□ -1.03
CBWD3-219ENST00000622817 ANKRD36CQ5JPF3 1778 aa8.63□□□□□ -1.03
CBWD3-219ENST00000622817 RTL5Q5HYW3 569 aaPredicted RBP8.63□□□□□ -1.03
CBWD3-219ENST00000622817 LHX8Q68G74 356 aa8.63□□□□□ -1.03
CBWD3-219ENST00000622817 C16orf71Q8IYS4 520 aaPredicted RBP8.63□□□□□ -1.03
CBWD3-219ENST00000622817 FAM212AQ96EL1 285 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms