RNA–Protein interactions for RNA: ENST00000621987.4

FMR1-220, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-220ENST00000621987 TXNRD1Q16881 649 aa16.03■□□□□ 0.16
FMR1-220ENST00000621987 BICC1Q9H694 974 aaKnown RBP16.03■□□□□ 0.16
FMR1-220ENST00000621987 UBR3Q6ZT12 1888 aa16.03■□□□□ 0.16
FMR1-220ENST00000621987 C4AP0C0L4 1744 aa16.02■□□□□ 0.16
FMR1-220ENST00000621987 APBA3O96018 575 aa16.02■□□□□ 0.16
FMR1-220ENST00000621987 HMGB2P26583 209 aaKnown RBP16.02■□□□□ 0.16
FMR1-220ENST00000621987 RABL6Q3YEC7 729 aaPredicted RBP16.02■□□□□ 0.16
FMR1-220ENST00000621987 EPHA10Q5JZY3 1008 aa16.02■□□□□ 0.16
FMR1-220ENST00000621987 CLEC4GQ6UXB4 293 aa16.02■□□□□ 0.16
FMR1-220ENST00000621987 JARID2Q92833 1246 aaPredicted RBP16.02■□□□□ 0.16
FMR1-220ENST00000621987 RTCBQ9Y3I0 505 aaKnown RBP16.02■□□□□ 0.16
FMR1-220ENST00000621987 SRGAP3O43295 1099 aa16.01■□□□□ 0.15
FMR1-220ENST00000621987 ILDR1Q86SU0 546 aaPredicted RBP16.01■□□□□ 0.15
FMR1-220ENST00000621987 CHD1LQ86WJ1 897 aa16.01■□□□□ 0.15
FMR1-220ENST00000621987 AMIGO3Q86WK7 504 aa16.01■□□□□ 0.15
FMR1-220ENST00000621987 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
FMR1-220ENST00000621987 NARFQ9UHQ1 456 aa16.01■□□□□ 0.15
FMR1-220ENST00000621987 UBN2Q6ZU65 1347 aa16.01■□□□□ 0.15
FMR1-220ENST00000621987 CDHR2Q9BYE9 1310 aa16.01■□□□□ 0.15
FMR1-220ENST00000621987 GPTP24298 496 aa16■□□□□ 0.15
FMR1-220ENST00000621987 PDE4AP27815 886 aa16■□□□□ 0.15
FMR1-220ENST00000621987 FOXO4P98177 505 aa16■□□□□ 0.15
FMR1-220ENST00000621987 ZBTB38Q8NAP3 1195 aaPredicted RBP16■□□□□ 0.15
FMR1-220ENST00000621987 AK7Q96M32 723 aa16■□□□□ 0.15
FMR1-220ENST00000621987 ZNF652Q9Y2D9 606 aa16■□□□□ 0.15
FMR1-220ENST00000621987 ANKRD45Q5TZF3 282 aa16■□□□□ 0.15
FMR1-220ENST00000621987 SMIM5Q71RC9 77 aa16■□□□□ 0.15
FMR1-220ENST00000621987 ARHGEF1Q92888 912 aaKnown RBP16■□□□□ 0.15
FMR1-220ENST00000621987 PLA2G12BQ9BX93 195 aa16■□□□□ 0.15
FMR1-220ENST00000621987 BCL2L12Q9HB09 334 aa16■□□□□ 0.15
FMR1-220ENST00000621987 NOP58Q9Y2X3 529 aaKnown RBP16■□□□□ 0.15
FMR1-220ENST00000621987 PARP10Q53GL7 1025 aa15.99■□□□□ 0.15
FMR1-220ENST00000621987 EXOC6BQ9Y2D4 811 aa15.99■□□□□ 0.15
FMR1-220ENST00000621987 RGS3P49796 1198 aa15.98■□□□□ 0.15
FMR1-220ENST00000621987 TRAPPC3LQ5T215 181 aa15.98■□□□□ 0.15
FMR1-220ENST00000621987 FAM89AQ96GI7 184 aa15.98■□□□□ 0.15
FMR1-220ENST00000621987 LNPKQ9C0E8 428 aa15.98■□□□□ 0.15
FMR1-220ENST00000621987 COL24A1Q17RW2 1714 aa15.98■□□□□ 0.15
FMR1-220ENST00000621987 USP42Q9H9J4 1324 aaKnown RBP15.97■□□□□ 0.15
FMR1-220ENST00000621987 SSFA2P28290 1259 aa15.97■□□□□ 0.15
FMR1-220ENST00000621987 RFX5P48382 616 aaPredicted RBP15.97■□□□□ 0.15
FMR1-220ENST00000621987 SUSD4Q5VX71 490 aa15.97■□□□□ 0.15
FMR1-220ENST00000621987 USPL1Q5W0Q7 1092 aa15.97■□□□□ 0.15
FMR1-220ENST00000621987 SRP68Q9UHB9 627 aaKnown RBP15.97■□□□□ 0.15
FMR1-220ENST00000621987 TRMT112Q9UI30 125 aaKnown RBP15.97■□□□□ 0.15
FMR1-220ENST00000621987 LAMB2P55268 1798 aa15.97■□□□□ 0.15
FMR1-220ENST00000621987 RAB11FIP3O75154 756 aa15.96■□□□□ 0.15
FMR1-220ENST00000621987 ZPR1O75312 459 aa15.96■□□□□ 0.15
FMR1-220ENST00000621987 SURF6O75683 361 aaKnown RBP15.96■□□□□ 0.15
FMR1-220ENST00000621987 RTL5Q5HYW3 569 aaPredicted RBP15.96■□□□□ 0.15
FMR1-220ENST00000621987 LMBR1LQ6UX01 489 aa15.96■□□□□ 0.15
FMR1-220ENST00000621987 AKT1S1Q96B36 256 aa15.96■□□□□ 0.15
FMR1-220ENST00000621987 NIP7Q9Y221 180 aaKnown RBP eCLIP15.96■□□□□ 0.15
FMR1-220ENST00000621987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.95■□□□□ 0.14
FMR1-220ENST00000621987 NTSR2O95665 410 aa15.95■□□□□ 0.14
FMR1-220ENST00000621987 CSF1RP07333 972 aa15.95■□□□□ 0.14
FMR1-220ENST00000621987 HSP90AB4PQ58FF6 505 aa15.95■□□□□ 0.14
FMR1-220ENST00000621987 SYNE4Q8N205 404 aa15.95■□□□□ 0.14
FMR1-220ENST00000621987 UTP14AQ9BVJ6 771 aaKnown RBP15.95■□□□□ 0.14
FMR1-220ENST00000621987 DDX60Q8IY21 1712 aaKnown RBP15.95■□□□□ 0.14
FMR1-220ENST00000621987 TUBGCP6Q96RT7 1819 aa15.94■□□□□ 0.14
FMR1-220ENST00000621987 PHF14O94880 888 aa15.94■□□□□ 0.14
FMR1-220ENST00000621987 RFC4P35249 363 aa15.94■□□□□ 0.14
FMR1-220ENST00000621987 TBC1D9BQ66K14 1250 aa15.94■□□□□ 0.14
FMR1-220ENST00000621987 CAMKK2Q96RR4 588 aa15.94■□□□□ 0.14
FMR1-220ENST00000621987 LRRCC1Q9C099 1032 aa15.94■□□□□ 0.14
FMR1-220ENST00000621987 COPRSQ9NQ92 184 aa15.94■□□□□ 0.14
FMR1-220ENST00000621987 PA2G4Q9UQ80 394 aaKnown RBP15.94■□□□□ 0.14
FMR1-220ENST00000621987 MYH3P11055 1940 aa15.94■□□□□ 0.14
FMR1-220ENST00000621987 SH3TC1Q8TE82 1336 aa15.94■□□□□ 0.14
FMR1-220ENST00000621987 IRS4O14654 1257 aaPredicted RBP15.93■□□□□ 0.14
FMR1-220ENST00000621987 SMARCA5O60264 1052 aaPredicted RBP15.93■□□□□ 0.14
FMR1-220ENST00000621987 PTPN12Q05209 780 aaKnown RBP15.93■□□□□ 0.14
FMR1-220ENST00000621987 ZNF827Q17R98 1081 aa15.93■□□□□ 0.14
FMR1-220ENST00000621987 APBB1O00213 710 aa15.92■□□□□ 0.14
FMR1-220ENST00000621987 RHPN1Q8TCX5 695 aa15.92■□□□□ 0.14
FMR1-220ENST00000621987 KIF1BPQ96EK5 621 aa15.92■□□□□ 0.14
FMR1-220ENST00000621987 ZBTB47Q9UFB7 747 aaPredicted RBP15.92■□□□□ 0.14
FMR1-220ENST00000621987 PDE8AO60658 829 aa15.91■□□□□ 0.14
FMR1-220ENST00000621987 CTSWP56202 376 aa15.91■□□□□ 0.14
FMR1-220ENST00000621987 ERC1Q8IUD2 1116 aa15.91■□□□□ 0.14
FMR1-220ENST00000621987 C16orf71Q8IYS4 520 aaPredicted RBP15.91■□□□□ 0.14
FMR1-220ENST00000621987 TTLL11Q8NHH1 800 aa15.91■□□□□ 0.14
FMR1-220ENST00000621987 SALL3Q9BXA9 1300 aa15.91■□□□□ 0.14
FMR1-220ENST00000621987 PLEKHM2Q8IWE5 1019 aa15.9■□□□□ 0.14
FMR1-220ENST00000621987 KLHDC4Q8TBB5 520 aa15.9■□□□□ 0.14
FMR1-220ENST00000621987 SETDB2Q96T68 719 aa15.9■□□□□ 0.14
FMR1-220ENST00000621987 FAM177BA6PVY3 158 aa15.89■□□□□ 0.13
FMR1-220ENST00000621987 SASH1O94885 1247 aa15.89■□□□□ 0.13
FMR1-220ENST00000621987 GYS1P13807 737 aa15.89■□□□□ 0.13
FMR1-220ENST00000621987 HSP90B1P14625 803 aaKnown RBP15.89■□□□□ 0.13
FMR1-220ENST00000621987 EN1Q05925 392 aaPredicted RBP15.89■□□□□ 0.13
FMR1-220ENST00000621987 G3BP1Q13283 466 aaKnown RBP eCLIP15.89■□□□□ 0.13
FMR1-220ENST00000621987 EZH2Q15910 746 aaKnown RBP15.89■□□□□ 0.13
FMR1-220ENST00000621987 QSER1Q2KHR3 1735 aa15.89■□□□□ 0.13
FMR1-220ENST00000621987 HCLS1P14317 486 aaPredicted RBP15.88■□□□□ 0.13
FMR1-220ENST00000621987 OS9Q13438 667 aaPredicted RBP15.88■□□□□ 0.13
FMR1-220ENST00000621987 FAM161AQ3B820 660 aa15.88■□□□□ 0.13
FMR1-220ENST00000621987 SLC10A5Q5PT55 438 aa15.88■□□□□ 0.13
FMR1-220ENST00000621987 BICDL1Q6ZP65 573 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms