RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 WDR33Q9C0J8 1336 aaKnown RBP12.06□□□□□ -0.48
SYN3-213ENST00000619146 FKBP4Q02790 459 aaKnown RBP eCLIP12.05□□□□□ -0.48
SYN3-213ENST00000619146 CCDC146Q8IYE0 955 aa12.05□□□□□ -0.48
SYN3-213ENST00000619146 L3MBTL3Q96JM7 780 aaPredicted RBP12.05□□□□□ -0.48
SYN3-213ENST00000619146 FMNL2Q96PY5 1086 aa12.05□□□□□ -0.48
SYN3-213ENST00000619146 USP16Q9Y5T5 823 aa12.05□□□□□ -0.48
SYN3-213ENST00000619146 GNAT3A8MTJ3 354 aa12.04□□□□□ -0.48
SYN3-213ENST00000619146 APAF1O14727 1248 aa12.04□□□□□ -0.48
SYN3-213ENST00000619146 TCERG1O14776 1098 aaKnown RBP12.04□□□□□ -0.48
SYN3-213ENST00000619146 SOGA3Q5TF21 947 aa12.04□□□□□ -0.48
SYN3-213ENST00000619146 CYP4F22Q6NT55 531 aa12.04□□□□□ -0.48
SYN3-213ENST00000619146 SYNE4Q8N205 404 aa12.04□□□□□ -0.48
SYN3-213ENST00000619146 C7orf43Q8WVR3 580 aa12.04□□□□□ -0.48
SYN3-213ENST00000619146 ZBED9Q6R2W3 1325 aa12.04□□□□□ -0.48
SYN3-213ENST00000619146 RASSF10A6NK89 507 aa12.03□□□□□ -0.48
SYN3-213ENST00000619146 TRAF5O00463 557 aa12.03□□□□□ -0.48
SYN3-213ENST00000619146 NPR1P16066 1061 aa12.03□□□□□ -0.48
SYN3-213ENST00000619146 IARSP41252 1262 aaKnown RBP12.03□□□□□ -0.48
SYN3-213ENST00000619146 BTBD11A6QL63 1104 aa12.02□□□□□ -0.49
SYN3-213ENST00000619146 AOC2O75106 756 aa12.02□□□□□ -0.49
SYN3-213ENST00000619146 CAPNS2Q96L46 248 aa12.02□□□□□ -0.49
SYN3-213ENST00000619146 TEX13AQ9BXU3 409 aaPredicted RBP12.02□□□□□ -0.49
SYN3-213ENST00000619146 NIP7Q9Y221 180 aaKnown RBP eCLIP12.02□□□□□ -0.49
SYN3-213ENST00000619146 TMPOP42166 694 aaKnown RBP12.01□□□□□ -0.49
SYN3-213ENST00000619146 CCDC27Q2M243 656 aa12.01□□□□□ -0.49
SYN3-213ENST00000619146 DDX21Q9NR30 783 aaKnown RBP eCLIP12.01□□□□□ -0.49
SYN3-213ENST00000619146 KDM3BQ7LBC6 1761 aa12□□□□□ -0.49
SYN3-213ENST00000619146 GTF2E1P29083 439 aaPredicted RBP12□□□□□ -0.49
SYN3-213ENST00000619146 EPS15P42566 896 aa12□□□□□ -0.49
SYN3-213ENST00000619146 MAP2K1Q02750 393 aaPredicted RBP12□□□□□ -0.49
SYN3-213ENST00000619146 MLLT1Q03111 559 aaPredicted RBP12□□□□□ -0.49
SYN3-213ENST00000619146 LMOD3Q0VAK6 560 aa12□□□□□ -0.49
SYN3-213ENST00000619146 NFE2L2Q16236 605 aa12□□□□□ -0.49
SYN3-213ENST00000619146 HLFQ16534 295 aa12□□□□□ -0.49
SYN3-213ENST00000619146 NUTM1Q86Y26 1132 aa12□□□□□ -0.49
SYN3-213ENST00000619146 GAS2L2Q8NHY3 880 aa12□□□□□ -0.49
SYN3-213ENST00000619146 PHACTR3Q96KR7 559 aa12□□□□□ -0.49
SYN3-213ENST00000619146 NBPF26B4DH59 902 aa11.99□□□□□ -0.49
SYN3-213ENST00000619146 FZD9O00144 591 aa11.99□□□□□ -0.49
SYN3-213ENST00000619146 CENPBP07199 599 aaPredicted RBP11.99□□□□□ -0.49
SYN3-213ENST00000619146 DCTN1Q14203 1278 aa11.99□□□□□ -0.49
SYN3-213ENST00000619146 NBPF10Q6P3W6 841 aaKnown RBP11.99□□□□□ -0.49
SYN3-213ENST00000619146 MCM10Q7L590 875 aa11.99□□□□□ -0.49
SYN3-213ENST00000619146 PNMA8AQ86V59 439 aaPredicted RBP11.99□□□□□ -0.49
SYN3-213ENST00000619146 RTKN2Q8IZC4 609 aa11.99□□□□□ -0.49
SYN3-213ENST00000619146 GPC2Q8N158 579 aa11.99□□□□□ -0.49
SYN3-213ENST00000619146 NBPF15Q8N660 670 aa11.99□□□□□ -0.49
SYN3-213ENST00000619146 JDP2Q8WYK2 163 aa11.99□□□□□ -0.49
SYN3-213ENST00000619146 GPR101Q96P66 508 aaPredicted RBP11.99□□□□□ -0.49
SYN3-213ENST00000619146 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
SYN3-213ENST00000619146 ZNF652Q9Y2D9 606 aa11.99□□□□□ -0.49
SYN3-213ENST00000619146 ABCC12Q96J65 1359 aa11.99□□□□□ -0.49
SYN3-213ENST00000619146 ANKRD36CQ5JPF3 1778 aa11.99□□□□□ -0.49
SYN3-213ENST00000619146 LMOD1P29536 600 aaPredicted RBP11.98□□□□□ -0.49
SYN3-213ENST00000619146 EIF6P56537 245 aaKnown RBP11.98□□□□□ -0.49
SYN3-213ENST00000619146 RIPK4P57078 832 aa11.98□□□□□ -0.49
SYN3-213ENST00000619146 CALD1Q05682 793 aaKnown RBP11.98□□□□□ -0.49
SYN3-213ENST00000619146 TPTE2Q6XPS3 522 aa11.98□□□□□ -0.49
SYN3-213ENST00000619146 HTATSF1O43719 755 aaKnown RBP11.97□□□□□ -0.49
SYN3-213ENST00000619146 SCNN1DP51172 638 aa11.97□□□□□ -0.49
SYN3-213ENST00000619146 NEUROD2Q15784 382 aa11.97□□□□□ -0.49
SYN3-213ENST00000619146 CST9Q5W186 159 aa11.97□□□□□ -0.49
SYN3-213ENST00000619146 WWC1Q8IX03 1113 aa11.97□□□□□ -0.49
SYN3-213ENST00000619146 LARGE2Q8N3Y3 721 aa11.97□□□□□ -0.49
SYN3-213ENST00000619146 ZNF408Q9H9D4 720 aa11.97□□□□□ -0.49
SYN3-213ENST00000619146 MIS18AQ9NYP9 233 aa11.97□□□□□ -0.49
SYN3-213ENST00000619146 RRP7AQ9Y3A4 280 aaKnown RBP11.97□□□□□ -0.49
SYN3-213ENST00000619146 SALL2Q9Y467 1007 aaPredicted RBP11.97□□□□□ -0.49
SYN3-213ENST00000619146 SNED1Q8TER0 1413 aa11.96□□□□□ -0.49
SYN3-213ENST00000619146 CEMIPQ8WUJ3 1361 aa11.96□□□□□ -0.49
SYN3-213ENST00000619146 ZNF521Q96K83 1311 aa11.96□□□□□ -0.49
SYN3-213ENST00000619146 GPTP24298 496 aa11.96□□□□□ -0.49
SYN3-213ENST00000619146 ALDH1B1P30837 517 aa11.96□□□□□ -0.49
SYN3-213ENST00000619146 WDR63Q8IWG1 891 aa11.96□□□□□ -0.49
SYN3-213ENST00000619146 KLRG2A4D1S0 409 aaPredicted RBP11.95□□□□□ -0.5
SYN3-213ENST00000619146 SNRPA1P09661 255 aaKnown RBP11.95□□□□□ -0.5
SYN3-213ENST00000619146 GOLGA2Q08379 1002 aa11.95□□□□□ -0.5
SYN3-213ENST00000619146 CLEC4GQ6UXB4 293 aa11.95□□□□□ -0.5
SYN3-213ENST00000619146 RPGRQ92834 1020 aaKnown RBP11.95□□□□□ -0.5
SYN3-213ENST00000619146 MCOLN1Q9GZU1 580 aa11.95□□□□□ -0.5
SYN3-213ENST00000619146 ECE1P42892 770 aa11.94□□□□□ -0.5
SYN3-213ENST00000619146 AOC3Q16853 763 aa11.94□□□□□ -0.5
SYN3-213ENST00000619146 DLK2Q6UY11 383 aa11.94□□□□□ -0.5
SYN3-213ENST00000619146 RTF1Q92541 710 aaKnown RBP11.94□□□□□ -0.5
SYN3-213ENST00000619146 GLIS2Q9BZE0 524 aaPredicted RBP11.94□□□□□ -0.5
SYN3-213ENST00000619146 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
SYN3-213ENST00000619146 IL16Q14005 1332 aa11.93□□□□□ -0.5
SYN3-213ENST00000619146 E9PSI1 815 aa11.93□□□□□ -0.5
SYN3-213ENST00000619146 CELF2O95319 508 aaKnown RBP11.93□□□□□ -0.5
SYN3-213ENST00000619146 DGKZQ13574 1117 aa11.93□□□□□ -0.5
SYN3-213ENST00000619146 TTLL7Q6ZT98 887 aa11.93□□□□□ -0.5
SYN3-213ENST00000619146 C3orf67Q6ZVT6 689 aa11.93□□□□□ -0.5
SYN3-213ENST00000619146 NIM1KQ8IY84 436 aa11.93□□□□□ -0.5
SYN3-213ENST00000619146 ZNF428Q96B54 188 aa11.93□□□□□ -0.5
SYN3-213ENST00000619146 ZIC5Q96T25 663 aa11.93□□□□□ -0.5
SYN3-213ENST00000619146 PSMD1Q99460 953 aa11.93□□□□□ -0.5
SYN3-213ENST00000619146 TLL2Q9Y6L7 1015 aa11.93□□□□□ -0.5
SYN3-213ENST00000619146 SHTN1A0MZ66 631 aa11.92□□□□□ -0.5
SYN3-213ENST00000619146 PPEF1O14829 653 aaPredicted RBP11.92□□□□□ -0.5
SYN3-213ENST00000619146 PPIP5K2O43314 1243 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms