RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 AOX1Q06278 1338 aa30.96■■■□□ 2.55
VEGFC-202ENST00000618562 CICQ96RK0 1608 aaPredicted RBP30.96■■■□□ 2.55
VEGFC-202ENST00000618562 ERC1Q8IUD2 1116 aa30.96■■■□□ 2.55
VEGFC-202ENST00000618562 MAP3K15Q6ZN16 1313 aa30.95■■■□□ 2.55
VEGFC-202ENST00000618562 RABEP1Q15276 862 aa30.94■■■□□ 2.54
VEGFC-202ENST00000618562 KLHDC4Q8TBB5 520 aa30.94■■■□□ 2.54
VEGFC-202ENST00000618562 PALLDQ8WX93 1383 aa30.93■■■□□ 2.54
VEGFC-202ENST00000618562 LOC102724428A0A0B4J2F2 783 aa30.93■■■□□ 2.54
VEGFC-202ENST00000618562 SIK1P57059 783 aa30.93■■■□□ 2.54
VEGFC-202ENST00000618562 MEX3CQ5U5Q3 659 aaKnown RBP30.93■■■□□ 2.54
VEGFC-202ENST00000618562 USP26Q9BXU7 913 aa30.93■■■□□ 2.54
VEGFC-202ENST00000618562 DDX11L8A8MPP1 907 aa30.93■■■□□ 2.54
VEGFC-202ENST00000618562 CD2BP2O95400 341 aaKnown RBP30.93■■■□□ 2.54
VEGFC-202ENST00000618562 RFX5P48382 616 aaPredicted RBP30.93■■■□□ 2.54
VEGFC-202ENST00000618562 SASH1O94885 1247 aa30.92■■■□□ 2.54
VEGFC-202ENST00000618562 FOXO4P98177 505 aa30.92■■■□□ 2.54
VEGFC-202ENST00000618562 ATP6V1AP38606 617 aa30.91■■■□□ 2.54
VEGFC-202ENST00000618562 TRIM28Q13263 835 aaKnown RBP30.91■■■□□ 2.54
VEGFC-202ENST00000618562 G3BP1Q13283 466 aaKnown RBP eCLIP30.91■■■□□ 2.54
VEGFC-202ENST00000618562 IL6STP40189 918 aaPredicted RBP30.91■■■□□ 2.54
VEGFC-202ENST00000618562 GIGYF2Q6Y7W6 1299 aaKnown RBP30.91■■■□□ 2.54
VEGFC-202ENST00000618562 CLASRPQ8N2M8 674 aaKnown RBP30.91■■■□□ 2.54
VEGFC-202ENST00000618562 ARXQ96QS3 562 aa30.91■■■□□ 2.54
VEGFC-202ENST00000618562 SIL1Q9H173 461 aa30.91■■■□□ 2.54
VEGFC-202ENST00000618562 RREB1Q92766 1687 aa30.91■■■□□ 2.54
VEGFC-202ENST00000618562 COPRSQ9NQ92 184 aa30.9■■■□□ 2.54
VEGFC-202ENST00000618562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.9■■■□□ 2.54
VEGFC-202ENST00000618562 ANKRD36CQ5JPF3 1778 aa30.9■■■□□ 2.54
VEGFC-202ENST00000618562 HLFQ16534 295 aa30.89■■■□□ 2.54
VEGFC-202ENST00000618562 IL27Q8NEV9 243 aa30.89■■■□□ 2.54
VEGFC-202ENST00000618562 PI4K2BQ8TCG2 481 aa30.89■■■□□ 2.54
VEGFC-202ENST00000618562 HSP90AA1P07900 732 aaKnown RBP30.89■■■□□ 2.54
VEGFC-202ENST00000618562 PTPN12Q05209 780 aaKnown RBP30.89■■■□□ 2.54
VEGFC-202ENST00000618562 ITPK1Q13572 414 aa30.89■■■□□ 2.54
VEGFC-202ENST00000618562 INTS5Q6P9B9 1019 aaKnown RBP30.89■■■□□ 2.54
VEGFC-202ENST00000618562 LMBR1LQ6UX01 489 aa30.89■■■□□ 2.54
VEGFC-202ENST00000618562 AFF2P51816 1311 aa30.89■■■□□ 2.54
VEGFC-202ENST00000618562 USP42Q9H9J4 1324 aaKnown RBP30.89■■■□□ 2.54
VEGFC-202ENST00000618562 NUP98P52948 1817 aa30.89■■■□□ 2.53
VEGFC-202ENST00000618562 REC8O95072 547 aa30.88■■■□□ 2.53
VEGFC-202ENST00000618562 RAB3GAP1Q15042 981 aa30.88■■■□□ 2.53
VEGFC-202ENST00000618562 BRPF3Q9ULD4 1205 aa30.88■■■□□ 2.53
VEGFC-202ENST00000618562 MYH14Q7Z406 1995 aaKnown RBP30.88■■■□□ 2.53
VEGFC-202ENST00000618562 SMARCC1Q92922 1105 aaPredicted RBP30.88■■■□□ 2.53
VEGFC-202ENST00000618562 CCDC87Q9NVE4 849 aa30.87■■■□□ 2.53
VEGFC-202ENST00000618562 CRKLP46109 303 aaKnown RBP30.86■■■□□ 2.53
VEGFC-202ENST00000618562 L1TD1Q5T7N2 865 aaKnown RBP30.86■■■□□ 2.53
VEGFC-202ENST00000618562 GJD4Q96KN9 370 aaPredicted RBP30.86■■■□□ 2.53
VEGFC-202ENST00000618562 EIF5P55010 431 aaKnown RBP30.85■■■□□ 2.53
VEGFC-202ENST00000618562 COL5A3P25940 1745 aaPredicted RBP30.85■■■□□ 2.53
VEGFC-202ENST00000618562 ZNF831Q5JPB2 1677 aa30.85■■■□□ 2.53
VEGFC-202ENST00000618562 DZIP3Q86Y13 1208 aaKnown RBP30.85■■■□□ 2.53
VEGFC-202ENST00000618562 AK9Q5TCS8 1911 aa30.84■■■□□ 2.53
VEGFC-202ENST00000618562 TTC41PQ6P2S7 1318 aa30.84■■■□□ 2.53
VEGFC-202ENST00000618562 TRIM6-TRIM34B2RNG4 842 aa30.84■■■□□ 2.53
VEGFC-202ENST00000618562 TRAK2O60296 914 aa30.84■■■□□ 2.53
VEGFC-202ENST00000618562 TNPO1Q92973 898 aaKnown RBP30.84■■■□□ 2.53
VEGFC-202ENST00000618562 GBP4Q96PP9 640 aa30.84■■■□□ 2.53
VEGFC-202ENST00000618562 ERC2O15083 957 aa30.83■■■□□ 2.53
VEGFC-202ENST00000618562 AACSQ86V21 672 aa30.83■■■□□ 2.53
VEGFC-202ENST00000618562 RILPL2Q969X0 211 aa30.83■■■□□ 2.53
VEGFC-202ENST00000618562 TBC1D2BQ9UPU7 963 aa30.83■■■□□ 2.53
VEGFC-202ENST00000618562 ERVV-1B6SEH8 477 aa30.83■■■□□ 2.53
VEGFC-202ENST00000618562 HSP90AB3PQ58FF7 597 aa30.83■■■□□ 2.53
VEGFC-202ENST00000618562 EAF2Q96CJ1 260 aaPredicted RBP30.83■■■□□ 2.53
VEGFC-202ENST00000618562 ATRNO75882 1429 aa30.83■■■□□ 2.53
VEGFC-202ENST00000618562 PCCAP05165 728 aaPredicted RBP30.82■■■□□ 2.52
VEGFC-202ENST00000618562 IFIT2P09913 472 aaKnown RBP30.82■■■□□ 2.52
VEGFC-202ENST00000618562 PTF1AQ7RTS3 328 aa30.82■■■□□ 2.52
VEGFC-202ENST00000618562 CHMP3Q9Y3E7 222 aa30.82■■■□□ 2.52
VEGFC-202ENST00000618562 PTMSP20962 102 aa30.81■■■□□ 2.52
VEGFC-202ENST00000618562 GPTP24298 496 aa30.81■■■□□ 2.52
VEGFC-202ENST00000618562 NLRP10Q86W26 655 aa30.81■■■□□ 2.52
VEGFC-202ENST00000618562 NHSQ6T4R5 1651 aa30.8■■■□□ 2.52
VEGFC-202ENST00000618562 ZBTB38Q8NAP3 1195 aaPredicted RBP30.8■■■□□ 2.52
VEGFC-202ENST00000618562 BTAF1O14981 1849 aa30.8■■■□□ 2.52
VEGFC-202ENST00000618562 FAM89AQ96GI7 184 aa30.8■■■□□ 2.52
VEGFC-202ENST00000618562 ECHDC1Q9NTX5 307 aa30.8■■■□□ 2.52
VEGFC-202ENST00000618562 GLRX3O76003 335 aaKnown RBP30.78■■■□□ 2.52
VEGFC-202ENST00000618562 MAP4K4O95819 1239 aaPredicted RBP30.78■■■□□ 2.52
VEGFC-202ENST00000618562 CHMLP26374 656 aa30.78■■■□□ 2.52
VEGFC-202ENST00000618562 FAM182BQ5T319 152 aa30.78■■■□□ 2.52
VEGFC-202ENST00000618562 CCDC8Q9H0W5 538 aaPredicted RBP30.77■■■□□ 2.52
VEGFC-202ENST00000618562 GPATCH3Q96I76 525 aa30.77■■■□□ 2.52
VEGFC-202ENST00000618562 PLA2G12BQ9BX93 195 aa30.77■■■□□ 2.52
VEGFC-202ENST00000618562 TLR7Q9NYK1 1049 aaKnown RBP30.77■■■□□ 2.52
VEGFC-202ENST00000618562 TRPC5Q9UL62 973 aaPredicted RBP30.77■■■□□ 2.52
VEGFC-202ENST00000618562 ONECUT3O60422 494 aaPredicted RBP30.76■■■□□ 2.51
VEGFC-202ENST00000618562 TFCP2Q12800 502 aa30.75■■■□□ 2.51
VEGFC-202ENST00000618562 CDHR2Q9BYE9 1310 aa30.75■■■□□ 2.51
VEGFC-202ENST00000618562 FSD2A1L4K1 749 aa30.75■■■□□ 2.51
VEGFC-202ENST00000618562 ST18O60284 1047 aa30.75■■■□□ 2.51
VEGFC-202ENST00000618562 SYNE4Q8N205 404 aa30.75■■■□□ 2.51
VEGFC-202ENST00000618562 CLEC17AQ6ZS10 378 aa30.74■■■□□ 2.51
VEGFC-202ENST00000618562 ZNF34Q8IZ26 560 aa30.74■■■□□ 2.51
VEGFC-202ENST00000618562 ESYT1Q9BSJ8 1104 aa30.74■■■□□ 2.51
VEGFC-202ENST00000618562 UBN2Q6ZU65 1347 aa30.74■■■□□ 2.51
VEGFC-202ENST00000618562 LINC00116Q8NCU8 138 aa30.74■■■□□ 2.51
VEGFC-202ENST00000618562 SBF2Q86WG5 1849 aa30.73■■■□□ 2.51
VEGFC-202ENST00000618562 ATG9AQ7Z3C6 839 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms