RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 GUCY1B3Q02153 619 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 CDC42BPBQ9Y5S2 1711 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 PLEKHG1Q9ULL1 1385 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 TPM2P07951 284 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 ZNF396Q96N95 335 aaPredicted RBP6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 DDX19AQ9NUU7 478 aaKnown RBP6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 TPM3P06753 285 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 MCM5P33992 734 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 JMYQ8N9B5 988 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 NDUFB9Q9Y6M9 179 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 ADGRB3O60242 1522 aa6.64□□□□□ -1.35
SYNCRIP-204ENST00000616122 HMGB1P09429 215 aaKnown RBP6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 RBM10P98175 930 aaKnown RBP6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 VPS53Q5VIR6 699 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 VPS37DQ86XT2 251 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 ZCRB1Q8TBF4 217 aaKnown RBP6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 TMOD3Q9NYL9 352 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 ZCCHC11Q5TAX3 1644 aaKnown RBP6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 MTX1Q13505 466 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 HS1BP3Q53T59 392 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 RRP12Q5JTH9 1297 aaKnown RBP6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 RASSF8Q8NHQ8 419 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 FAM200AQ8TCP9 573 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 ERBB3P21860 1342 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 NRXN1Q9ULB1 1477 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 A1BGP04217 495 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 TRMT112Q9UI30 125 aaKnown RBP6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 CLASP1Q7Z460 1538 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 TULP4Q9NRJ4 1543 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 IMMTQ16891 758 aaKnown RBP6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 KIF6Q6ZMV9 814 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 MAP7D2Q96T17 732 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 METTL22Q9BUU2 404 aaPredicted RBP6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 COPRSQ9NQ92 184 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 AKAP2Q9Y2D5 859 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 ADCY5O95622 1261 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 SART3Q15020 963 aaKnown RBP6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 ORC3Q9UBD5 711 aaPredicted RBP6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 ABCF2Q9UG63 623 aa6.63□□□□□ -1.35
SYNCRIP-204ENST00000616122 PRAMEF22A3QJZ6 481 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 EYA2O00167 538 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 TTC39AQ5SRH9 613 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 MED14O60244 1454 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 KDM4AO75164 1064 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 PTH1RQ03431 593 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 ADCK5Q3MIX3 580 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 MCMDC2Q4G0Z9 681 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 C8orf76Q96K31 380 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 NAT10Q9H0A0 1025 aaKnown RBP6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 CCDC82Q8N4S0 544 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 TFCP2Q12800 502 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 ATP2B3Q16720 1220 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 KBTBD3Q8NAB2 608 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 NACAP1Q9BZK3 213 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 KDM5AP29375 1690 aaKnown RBP6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 DHX32Q7L7V1 743 aaKnown RBP6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 FAM89AQ96GI7 184 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 KDRP35968 1356 aa6.62□□□□□ -1.35
SYNCRIP-204ENST00000616122 GADD45BO75293 160 aaPredicted RBP6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 HOMER1Q86YM7 354 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 AIDAQ96BJ3 306 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 SLC52A2Q9HAB3 445 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 PTPRMP28827 1452 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 ERICH2A1L162 156 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 CAVIN2O95810 425 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 TRIM22Q8IYM9 498 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 ZDHHC9Q9Y397 364 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 A0A0D9SFI3 127 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 RRP9O43818 475 aaKnown RBP6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 OFD1O75665 1012 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 UVSSAQ2YD98 709 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 MAP4K1Q92918 833 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.61□□□□□ -1.354e-7■□□□□ 10
SYNCRIP-204ENST00000616122 DBNLQ9UJU6 430 aaKnown RBP6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 NEURL1BA8MQ27 555 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 ZSCAN25Q6NSZ9 544 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 TTC6Q86TZ1 520 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 CREBRFQ8IUR6 639 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 DDX17Q92841 729 aaKnown RBP6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 MTMR6Q9Y217 621 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 AXIN2Q9Y2T1 843 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 ZNF213O14771 459 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 TNNI3KQ59H18 835 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 RAB11FIP4Q86YS3 637 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 ZNF830Q96NB3 372 aaPredicted RBP6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 TEX13AQ9BXU3 409 aaPredicted RBP6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 FPGT-TNNI3KV9GXZ4 949 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 SASH1O94885 1247 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 ATP5JP18859 108 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 POLA2Q14181 598 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 RUFY3Q7L099 469 aa6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 NOL7Q9UMY1 257 aaKnown RBP6.61□□□□□ -1.35
SYNCRIP-204ENST00000616122 ZFYP08048 801 aaPredicted RBP6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 MTERF4Q7Z6M4 381 aaKnown RBP6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 MICU3Q86XE3 530 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 NAPBQ9H115 298 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 USP31Q70CQ4 1352 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 ATP10DQ9P241 1426 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 GOLGA8BA8MQT2 603 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms