RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 LINS1Q8NG48 757 aa11.52□□□□□ -0.57
MMP28-205ENST00000615317 CRBNQ96SW2 442 aa11.52□□□□□ -0.57
MMP28-205ENST00000615317 ISCA1Q9BUE6 129 aa11.52□□□□□ -0.57
MMP28-205ENST00000615317 A0A1B0GUL6 1792 aa11.51□□□□□ -0.57
MMP28-205ENST00000615317 LRP5O75197 1615 aa11.51□□□□□ -0.57
MMP28-205ENST00000615317 RGL2O15211 777 aa11.51□□□□□ -0.57
MMP28-205ENST00000615317 ZBTB7AO95365 584 aa11.51□□□□□ -0.57
MMP28-205ENST00000615317 MS4A1P11836 297 aa11.51□□□□□ -0.57
MMP28-205ENST00000615317 DDR1Q08345 913 aa11.51□□□□□ -0.57
MMP28-205ENST00000615317 NLRP10Q86W26 655 aa11.51□□□□□ -0.57
MMP28-205ENST00000615317 ZNF34Q8IZ26 560 aa11.51□□□□□ -0.57
MMP28-205ENST00000615317 CWC25Q9NXE8 425 aaPredicted RBP11.51□□□□□ -0.57
MMP28-205ENST00000615317 ALDH1L1O75891 902 aa11.5□□□□□ -0.57
MMP28-205ENST00000615317 MMP10P09238 476 aa11.5□□□□□ -0.57
MMP28-205ENST00000615317 PDE3AQ14432 1141 aa11.5□□□□□ -0.57
MMP28-205ENST00000615317 RTL5Q5HYW3 569 aaPredicted RBP11.5□□□□□ -0.57
MMP28-205ENST00000615317 INTS3Q68E01 1043 aaKnown RBP11.5□□□□□ -0.57
MMP28-205ENST00000615317 CLEC4GQ6UXB4 293 aa11.5□□□□□ -0.57
MMP28-205ENST00000615317 MEIS3Q99687 375 aa11.5□□□□□ -0.57
MMP28-205ENST00000615317 TAF1P21675 1872 aa11.5□□□□□ -0.57
MMP28-205ENST00000615317 COL4A1P02462 1669 aa11.49□□□□□ -0.57
MMP28-205ENST00000615317 NTSR2O95665 410 aa11.49□□□□□ -0.57
MMP28-205ENST00000615317 NEFLP07196 543 aa11.49□□□□□ -0.57
MMP28-205ENST00000615317 GCKRQ14397 625 aa11.49□□□□□ -0.57
MMP28-205ENST00000615317 PARP10Q53GL7 1025 aa11.49□□□□□ -0.57
MMP28-205ENST00000615317 SUSD4Q5VX71 490 aa11.49□□□□□ -0.57
MMP28-205ENST00000615317 UBE3BQ7Z3V4 1068 aa11.49□□□□□ -0.57
MMP28-205ENST00000615317 NUTM1Q86Y26 1132 aa11.49□□□□□ -0.57
MMP28-205ENST00000615317 JARID2Q92833 1246 aaPredicted RBP11.49□□□□□ -0.57
MMP28-205ENST00000615317 SETDB2Q96T68 719 aa11.49□□□□□ -0.57
MMP28-205ENST00000615317 C1orf115Q9H7X2 142 aa11.49□□□□□ -0.57
MMP28-205ENST00000615317 C10orf71Q711Q0 1435 aa11.49□□□□□ -0.57
MMP28-205ENST00000615317 BRCA1P38398 1863 aaKnown RBP11.49□□□□□ -0.57
MMP28-205ENST00000615317 GRM8O00222 908 aa11.48□□□□□ -0.57
MMP28-205ENST00000615317 POLRMTO00411 1230 aaKnown RBP11.48□□□□□ -0.57
MMP28-205ENST00000615317 NPHP1O15259 732 aa11.48□□□□□ -0.57
MMP28-205ENST00000615317 NBPF5PQ86XG9 351 aaPredicted RBP11.48□□□□□ -0.57
MMP28-205ENST00000615317 CCDC24Q8N4L8 307 aa11.48□□□□□ -0.57
MMP28-205ENST00000615317 CNBD1Q8NA66 436 aa11.48□□□□□ -0.57
MMP28-205ENST00000615317 CCDC191Q8NCU4 936 aa11.48□□□□□ -0.57
MMP28-205ENST00000615317 MTFR1LQ9H019 292 aa11.48□□□□□ -0.57
MMP28-205ENST00000615317 C9orf78Q9NZ63 289 aaPredicted RBP11.48□□□□□ -0.57
MMP28-205ENST00000615317 DDX19BQ9UMR2 479 aa11.48□□□□□ -0.57
MMP28-205ENST00000615317 RIC1Q4ADV7 1423 aa11.48□□□□□ -0.57
MMP28-205ENST00000615317 SH3TC1Q8TE82 1336 aa11.47□□□□□ -0.57
MMP28-205ENST00000615317 NBPF7P0C2Y1 421 aaPredicted RBP11.47□□□□□ -0.57
MMP28-205ENST00000615317 UBTFL1P0CB47 393 aaPredicted RBP11.47□□□□□ -0.57
MMP28-205ENST00000615317 NLGN1Q8N2Q7 840 aa11.47□□□□□ -0.57
MMP28-205ENST00000615317 EXOC6Q8TAG9 804 aa11.47□□□□□ -0.57
MMP28-205ENST00000615317 FAM89AQ96GI7 184 aa11.47□□□□□ -0.57
MMP28-205ENST00000615317 UTP14AQ9BVJ6 771 aaKnown RBP11.47□□□□□ -0.57
MMP28-205ENST00000615317 TRMT112Q9UI30 125 aaKnown RBP11.47□□□□□ -0.57
MMP28-205ENST00000615317 ATF5Q9Y2D1 282 aaPredicted RBP11.47□□□□□ -0.57
MMP28-205ENST00000615317 LRRC37AA6NMS7 1700 aa11.46□□□□□ -0.57
MMP28-205ENST00000615317 SERPINB2P05120 415 aa11.46□□□□□ -0.57
MMP28-205ENST00000615317 PCCAP05165 728 aaPredicted RBP11.46□□□□□ -0.57
MMP28-205ENST00000615317 ERFEQ4G0M1 354 aa11.46□□□□□ -0.57
MMP28-205ENST00000615317 PRR5LQ6MZQ0 368 aa11.46□□□□□ -0.57
MMP28-205ENST00000615317 PPP1R42Q7Z4L9 355 aa11.46□□□□□ -0.57
MMP28-205ENST00000615317 SYNE4Q8N205 404 aa11.46□□□□□ -0.57
MMP28-205ENST00000615317 SLC16A10Q8TF71 515 aa11.46□□□□□ -0.57
MMP28-205ENST00000615317 SUCLG2Q96I99 432 aa11.46□□□□□ -0.57
MMP28-205ENST00000615317 PARP3Q9Y6F1 533 aa11.46□□□□□ -0.57
MMP28-205ENST00000615317 UTYO14607 1347 aa11.45□□□□□ -0.58
MMP28-205ENST00000615317 CDHR2Q9BYE9 1310 aa11.45□□□□□ -0.58
MMP28-205ENST00000615317 TM4SF1P30408 202 aa11.45□□□□□ -0.58
MMP28-205ENST00000615317 CASP7P55210 303 aa11.45□□□□□ -0.58
MMP28-205ENST00000615317 ST5P78524 1137 aa11.45□□□□□ -0.58
MMP28-205ENST00000615317 TRIM28Q13263 835 aaKnown RBP11.45□□□□□ -0.58
MMP28-205ENST00000615317 ZBTB38Q8NAP3 1195 aaPredicted RBP11.45□□□□□ -0.58
MMP28-205ENST00000615317 NYXQ9GZU5 481 aa11.45□□□□□ -0.58
MMP28-205ENST00000615317 USP44Q9H0E7 712 aa11.45□□□□□ -0.58
MMP28-205ENST00000615317 LRRFIP2Q9Y608 721 aaKnown RBP11.45□□□□□ -0.58
MMP28-205ENST00000615317 IRS4O14654 1257 aaPredicted RBP11.44□□□□□ -0.58
MMP28-205ENST00000615317 GNAI3P08754 354 aa11.44□□□□□ -0.58
MMP28-205ENST00000615317 HCLS1P14317 486 aaPredicted RBP11.44□□□□□ -0.58
MMP28-205ENST00000615317 POLD1P28340 1107 aa11.44□□□□□ -0.58
MMP28-205ENST00000615317 GTF2E1P29083 439 aaPredicted RBP11.44□□□□□ -0.58
MMP28-205ENST00000615317 H7C1W4 665 aa11.43□□□□□ -0.58
MMP28-205ENST00000615317 ZBTB7BO15156 539 aaPredicted RBP11.43□□□□□ -0.58
MMP28-205ENST00000615317 C3orf67Q6ZVT6 689 aa11.43□□□□□ -0.58
MMP28-205ENST00000615317 KLHL34Q8N239 644 aa11.43□□□□□ -0.58
MMP28-205ENST00000615317 CCDC85AQ96PX6 553 aaPredicted RBP11.43□□□□□ -0.58
MMP28-205ENST00000615317 BICC1Q9H694 974 aaKnown RBP11.43□□□□□ -0.58
MMP28-205ENST00000615317 GNAI2P04899 355 aa11.42□□□□□ -0.58
MMP28-205ENST00000615317 PTGER2P43116 358 aa11.42□□□□□ -0.58
MMP28-205ENST00000615317 CTSWP56202 376 aa11.42□□□□□ -0.58
MMP28-205ENST00000615317 FAM161AQ3B820 660 aa11.42□□□□□ -0.58
MMP28-205ENST00000615317 EPHA10Q5JZY3 1008 aa11.42□□□□□ -0.58
MMP28-205ENST00000615317 TPTE2Q6XPS3 522 aa11.42□□□□□ -0.58
MMP28-205ENST00000615317 ANKRD44Q8N8A2 993 aa11.42□□□□□ -0.58
MMP28-205ENST00000615317 KAZALD1Q96I82 304 aa11.42□□□□□ -0.58
MMP28-205ENST00000615317 SGIP1Q9BQI5 828 aa11.42□□□□□ -0.58
MMP28-205ENST00000615317 ZBTB40Q9NUA8 1239 aa11.42□□□□□ -0.58
MMP28-205ENST00000615317 CHMP3Q9Y3E7 222 aa11.42□□□□□ -0.58
MMP28-205ENST00000615317 ARAP2Q8WZ64 1704 aa11.41□□□□□ -0.58
MMP28-205ENST00000615317 SLX4Q8IY92 1834 aa11.4□□□□□ -0.58
MMP28-205ENST00000615317 ARFGEF1Q9Y6D6 1849 aa11.4□□□□□ -0.58
MMP28-205ENST00000615317 PDE8AO60658 829 aa11.4□□□□□ -0.58
MMP28-205ENST00000615317 FOXO4P98177 505 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms