RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PPP4R3BQ5MIZ7 849 aa11.17□□□□□ -0.62
CCDC47-207ENST00000612558 KSR2Q6VAB6 950 aa11.17□□□□□ -0.62
CCDC47-207ENST00000612558 SKAP1Q86WV1 359 aa11.17□□□□□ -0.62
CCDC47-207ENST00000612558 PIGBQ92521 554 aa11.17□□□□□ -0.62
CCDC47-207ENST00000612558 GCC1Q96CN9 775 aa11.17□□□□□ -0.62
CCDC47-207ENST00000612558 SRCIN1Q9C0H9 1055 aa11.17□□□□□ -0.62
CCDC47-207ENST00000612558 PDZRN3Q9UPQ7 1066 aa11.17□□□□□ -0.62
CCDC47-207ENST00000612558 BCL9LQ86UU0 1499 aa11.17□□□□□ -0.62
CCDC47-207ENST00000612558 LRP6O75581 1613 aa11.17□□□□□ -0.62
CCDC47-207ENST00000612558 C5P01031 1676 aa11.17□□□□□ -0.62
CCDC47-207ENST00000612558 TOGARAM1Q9Y4F4 1720 aa11.17□□□□□ -0.62
CCDC47-207ENST00000612558 UBR2Q8IWV8 1755 aa11.16□□□□□ -0.62
CCDC47-207ENST00000612558 RGS3P49796 1198 aa11.16□□□□□ -0.62
CCDC47-207ENST00000612558 SIRT2Q8IXJ6 389 aa11.16□□□□□ -0.62
CCDC47-207ENST00000612558 ERBB4Q15303 1308 aa11.16□□□□□ -0.62
CCDC47-207ENST00000612558 PAPPAQ13219 1627 aa11.16□□□□□ -0.62
CCDC47-207ENST00000612558 N4BP2Q86UW6 1770 aaPredicted RBP11.16□□□□□ -0.62
CCDC47-207ENST00000612558 GNAI2P04899 355 aa11.16□□□□□ -0.62
CCDC47-207ENST00000612558 BEND3Q5T5X7 828 aa11.16□□□□□ -0.62
CCDC47-207ENST00000612558 ANKRD44Q8N8A2 993 aa11.16□□□□□ -0.62
CCDC47-207ENST00000612558 ADCY9O60503 1353 aa11.15□□□□□ -0.62
CCDC47-207ENST00000612558 ITGB4P16144 1822 aa11.15□□□□□ -0.62
CCDC47-207ENST00000612558 BCL9O00512 1426 aa11.15□□□□□ -0.62
CCDC47-207ENST00000612558 PTCD1O75127 700 aaKnown RBP11.15□□□□□ -0.62
CCDC47-207ENST00000612558 MYL6BP14649 208 aa11.15□□□□□ -0.62
CCDC47-207ENST00000612558 CEP85Q6P2H3 762 aa11.15□□□□□ -0.62
CCDC47-207ENST00000612558 KCPQ6ZWJ8 1503 aa11.15□□□□□ -0.62
CCDC47-207ENST00000612558 PLPP6Q8IY26 295 aa11.15□□□□□ -0.62
CCDC47-207ENST00000612558 VSIG10Q8N0Z9 540 aa11.15□□□□□ -0.62
CCDC47-207ENST00000612558 TEX13AQ9BXU3 409 aaPredicted RBP11.15□□□□□ -0.62
CCDC47-207ENST00000612558 USP44Q9H0E7 712 aa11.15□□□□□ -0.62
CCDC47-207ENST00000612558 ATG3Q9NT62 314 aa11.15□□□□□ -0.62
CCDC47-207ENST00000612558 ATP10DQ9P241 1426 aa11.15□□□□□ -0.62
CCDC47-207ENST00000612558 USP21Q9UK80 565 aa11.15□□□□□ -0.62
CCDC47-207ENST00000612558 MAP3K2Q9Y2U5 619 aa11.15□□□□□ -0.62
CCDC47-207ENST00000612558 GLI3P10071 1580 aa11.14□□□□□ -0.63
CCDC47-207ENST00000612558 ALDH1L1O75891 902 aa11.14□□□□□ -0.63
CCDC47-207ENST00000612558 AIMP1Q12904 312 aaKnown RBP11.14□□□□□ -0.63
CCDC47-207ENST00000612558 MEX3CQ5U5Q3 659 aaKnown RBP11.14□□□□□ -0.63
CCDC47-207ENST00000612558 COPS6Q7L5N1 327 aa11.14□□□□□ -0.63
CCDC47-207ENST00000612558 LRP10Q7Z4F1 713 aa11.14□□□□□ -0.63
CCDC47-207ENST00000612558 GPHNQ9NQX3 736 aaPredicted RBP11.14□□□□□ -0.63
CCDC47-207ENST00000612558 ASAP1Q9ULH1 1129 aa11.14□□□□□ -0.63
CCDC47-207ENST00000612558 RBM19Q9Y4C8 960 aaKnown RBP11.14□□□□□ -0.63
CCDC47-207ENST00000612558 LAMB4A4D0S4 1761 aa11.14□□□□□ -0.63
CCDC47-207ENST00000612558 HMMRO75330 724 aa11.13□□□□□ -0.63
CCDC47-207ENST00000612558 UBTFL1P0CB47 393 aaPredicted RBP11.13□□□□□ -0.63
CCDC47-207ENST00000612558 NUCB1Q02818 461 aa11.13□□□□□ -0.63
CCDC47-207ENST00000612558 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
CCDC47-207ENST00000612558 MARCH10Q8NA82 808 aaPredicted RBP11.13□□□□□ -0.63
CCDC47-207ENST00000612558 XAGE3Q8WTP9 111 aa11.13□□□□□ -0.63
CCDC47-207ENST00000612558 DCTPP1Q9H773 170 aa11.13□□□□□ -0.63
CCDC47-207ENST00000612558 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.12□□□□□ -0.63
CCDC47-207ENST00000612558 PDE4AP27815 886 aa11.12□□□□□ -0.63
CCDC47-207ENST00000612558 PRIM1P49642 420 aaKnown RBP11.12□□□□□ -0.63
CCDC47-207ENST00000612558 FAM98CQ17RN3 349 aaKnown RBP11.12□□□□□ -0.63
CCDC47-207ENST00000612558 LINS1Q8NG48 757 aa11.12□□□□□ -0.63
CCDC47-207ENST00000612558 SYTL4Q96C24 671 aaPredicted RBP11.12□□□□□ -0.63
CCDC47-207ENST00000612558 NBPF26B4DH59 902 aa11.11□□□□□ -0.63
CCDC47-207ENST00000612558 ATP8B2P98198 1209 aa11.11□□□□□ -0.63
CCDC47-207ENST00000612558 NBPF14Q5TI25 921 aa11.11□□□□□ -0.63
CCDC47-207ENST00000612558 NBPF10Q6P3W6 841 aaKnown RBP11.11□□□□□ -0.63
CCDC47-207ENST00000612558 CHD1LQ86WJ1 897 aa11.11□□□□□ -0.63
CCDC47-207ENST00000612558 NBPF15Q8N660 670 aa11.11□□□□□ -0.63
CCDC47-207ENST00000612558 HDAC5Q9UQL6 1122 aa11.11□□□□□ -0.63
CCDC47-207ENST00000612558 IBTKQ9P2D0 1353 aaPredicted RBP11.11□□□□□ -0.63
CCDC47-207ENST00000612558 NEXNQ0ZGT2 675 aa11.11□□□□□ -0.63
CCDC47-207ENST00000612558 ANKRD45Q5TZF3 282 aa11.11□□□□□ -0.63
CCDC47-207ENST00000612558 METTL22Q9BUU2 404 aaPredicted RBP11.11□□□□□ -0.63
CCDC47-207ENST00000612558 BACH2Q9BYV9 841 aa11.11□□□□□ -0.63
CCDC47-207ENST00000612558 LRRFIP2Q9Y608 721 aaKnown RBP11.11□□□□□ -0.63
CCDC47-207ENST00000612558 STARD3NLO95772 234 aa11.1□□□□□ -0.63
CCDC47-207ENST00000612558 A1BGP04217 495 aa11.1□□□□□ -0.63
CCDC47-207ENST00000612558 NBPF7P0C2Y1 421 aaPredicted RBP11.1□□□□□ -0.63
CCDC47-207ENST00000612558 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
CCDC47-207ENST00000612558 FAM161AQ3B820 660 aa11.1□□□□□ -0.63
CCDC47-207ENST00000612558 PLBD2Q8NHP8 589 aa11.1□□□□□ -0.63
CCDC47-207ENST00000612558 C9orf78Q9NZ63 289 aaPredicted RBP11.1□□□□□ -0.63
CCDC47-207ENST00000612558 DOT1LQ8TEK3 1739 aa11.09□□□□□ -0.63
CCDC47-207ENST00000612558 DNAJC10Q8IXB1 793 aa11.09□□□□□ -0.63
CCDC47-207ENST00000612558 HS6ST3Q8IZP7 471 aa11.09□□□□□ -0.63
CCDC47-207ENST00000612558 GJD4Q96KN9 370 aaPredicted RBP11.09□□□□□ -0.63
CCDC47-207ENST00000612558 LNPKQ9C0E8 428 aa11.09□□□□□ -0.63
CCDC47-207ENST00000612558 UTYO14607 1347 aa11.08□□□□□ -0.63
CCDC47-207ENST00000612558 AFF2P51816 1311 aa11.08□□□□□ -0.63
CCDC47-207ENST00000612558 IGKV5-2P06315 115 aa11.08□□□□□ -0.64
CCDC47-207ENST00000612558 PSEN2P49810 448 aa11.08□□□□□ -0.64
CCDC47-207ENST00000612558 CWF19L2Q2TBE0 894 aaKnown RBP11.08□□□□□ -0.64
CCDC47-207ENST00000612558 ACSBG1Q96GR2 724 aa11.08□□□□□ -0.64
CCDC47-207ENST00000612558 MYD88Q99836 296 aa11.08□□□□□ -0.64
CCDC47-207ENST00000612558 RYDENQ9NUL5 291 aaKnown RBP11.08□□□□□ -0.64
CCDC47-207ENST00000612558 TRPC5Q9UL62 973 aaPredicted RBP11.08□□□□□ -0.64
CCDC47-207ENST00000612558 A0A0G2JS52 829 aa11.07□□□□□ -0.64
CCDC47-207ENST00000612558 NEURL1BA8MQ27 555 aa11.07□□□□□ -0.64
CCDC47-207ENST00000612558 GRM8O00222 908 aa11.07□□□□□ -0.64
CCDC47-207ENST00000612558 HRO43593 1189 aa11.07□□□□□ -0.64
CCDC47-207ENST00000612558 MYT1Q01538 1121 aa11.07□□□□□ -0.64
CCDC47-207ENST00000612558 PNMA6EA0A0J9YXQ4 647 aa11.07□□□□□ -0.64
CCDC47-207ENST00000612558 CYP19A1P11511 503 aaPredicted RBP11.07□□□□□ -0.64
CCDC47-207ENST00000612558 GCKRQ14397 625 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms