RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 PHF12Q96QT6 1004 aa9.98□□□□□ -0.81
PTCHD3P1-201ENST00000612350 CARD14Q9BXL6 1004 aa9.98□□□□□ -0.81
PTCHD3P1-201ENST00000612350 RNF186Q9NXI6 227 aa9.98□□□□□ -0.81
PTCHD3P1-201ENST00000612350 PGAP2Q9UHJ9 254 aa9.98□□□□□ -0.81
PTCHD3P1-201ENST00000612350 BCORQ6W2J9 1755 aa9.98□□□□□ -0.81
PTCHD3P1-201ENST00000612350 SCN11AQ9UI33 1791 aa9.98□□□□□ -0.81
PTCHD3P1-201ENST00000612350 SNED1Q8TER0 1413 aa9.98□□□□□ -0.81
PTCHD3P1-201ENST00000612350 A0A087WZG4 1122 aa9.97□□□□□ -0.81
PTCHD3P1-201ENST00000612350 FAM155AB1AL88 458 aaPredicted RBP9.97□□□□□ -0.81
PTCHD3P1-201ENST00000612350 TRPA1O75762 1119 aa9.97□□□□□ -0.81
PTCHD3P1-201ENST00000612350 EIF6P56537 245 aaKnown RBP9.97□□□□□ -0.81
PTCHD3P1-201ENST00000612350 SLC39A6Q13433 755 aa9.97□□□□□ -0.81
PTCHD3P1-201ENST00000612350 AKAP4Q5JQC9 854 aa9.97□□□□□ -0.81
PTCHD3P1-201ENST00000612350 JDP2Q8WYK2 163 aa9.97□□□□□ -0.81
PTCHD3P1-201ENST00000612350 GLIS2Q9BZE0 524 aaPredicted RBP9.97□□□□□ -0.81
PTCHD3P1-201ENST00000612350 NPR1P16066 1061 aa9.96□□□□□ -0.82
PTCHD3P1-201ENST00000612350 ST5P78524 1137 aa9.96□□□□□ -0.82
PTCHD3P1-201ENST00000612350 C1orf141Q5JVX7 400 aa9.96□□□□□ -0.82
PTCHD3P1-201ENST00000612350 VSIG10Q8N0Z9 540 aa9.96□□□□□ -0.82
PTCHD3P1-201ENST00000612350 SETDB2Q96T68 719 aa9.96□□□□□ -0.82
PTCHD3P1-201ENST00000612350 SLC52A2Q9HAB3 445 aa9.96□□□□□ -0.82
PTCHD3P1-201ENST00000612350 SCN7AQ01118 1682 aa9.96□□□□□ -0.82
PTCHD3P1-201ENST00000612350 AKAP11Q9UKA4 1901 aa9.95□□□□□ -0.82
PTCHD3P1-201ENST00000612350 KIF23Q02241 960 aaPredicted RBP9.95□□□□□ -0.82
PTCHD3P1-201ENST00000612350 PSMD1Q99460 953 aa9.95□□□□□ -0.82
PTCHD3P1-201ENST00000612350 TBC1D2BQ9UPU7 963 aa9.95□□□□□ -0.82
PTCHD3P1-201ENST00000612350 SLC24A1O60721 1099 aa9.94□□□□□ -0.82
PTCHD3P1-201ENST00000612350 HUNKP57058 714 aa9.94□□□□□ -0.82
PTCHD3P1-201ENST00000612350 NEUROD1Q13562 356 aa9.94□□□□□ -0.82
PTCHD3P1-201ENST00000612350 PKN2Q16513 984 aaKnown RBP9.94□□□□□ -0.82
PTCHD3P1-201ENST00000612350 RGMBQ6NW40 437 aa9.94□□□□□ -0.82
PTCHD3P1-201ENST00000612350 MIER1Q8N108 512 aa9.94□□□□□ -0.82
PTCHD3P1-201ENST00000612350 PCGF6Q9BYE7 350 aa9.94□□□□□ -0.82
PTCHD3P1-201ENST00000612350 ZNF408Q9H9D4 720 aa9.94□□□□□ -0.82
PTCHD3P1-201ENST00000612350 LGR6Q9HBX8 967 aa9.94□□□□□ -0.82
PTCHD3P1-201ENST00000612350 ADARB2Q9NS39 739 aaKnown RBP9.94□□□□□ -0.82
PTCHD3P1-201ENST00000612350 GPRC5DQ9NZD1 345 aa9.94□□□□□ -0.82
PTCHD3P1-201ENST00000612350 CAMTA2O94983 1202 aa9.93□□□□□ -0.82
PTCHD3P1-201ENST00000612350 AEBP1Q8IUX7 1158 aa9.93□□□□□ -0.82
PTCHD3P1-201ENST00000612350 CSRNP1Q96S65 589 aa9.93□□□□□ -0.82
PTCHD3P1-201ENST00000612350 NPHP1O15259 732 aa9.92□□□□□ -0.82
PTCHD3P1-201ENST00000612350 HIRAP54198 1017 aaPredicted RBP9.92□□□□□ -0.82
PTCHD3P1-201ENST00000612350 CDC37L1Q7L3B6 337 aa9.92□□□□□ -0.82
PTCHD3P1-201ENST00000612350 ZC3H15Q8WU90 426 aaKnown RBP9.92□□□□□ -0.82
PTCHD3P1-201ENST00000612350 MRC1P22897 1456 aa9.91□□□□□ -0.82
PTCHD3P1-201ENST00000612350 STARD3NLO95772 234 aa9.91□□□□□ -0.82
PTCHD3P1-201ENST00000612350 IL6STP40189 918 aaPredicted RBP9.91□□□□□ -0.82
PTCHD3P1-201ENST00000612350 DLK2Q6UY11 383 aa9.91□□□□□ -0.82
PTCHD3P1-201ENST00000612350 CCDC102AQ96A19 550 aa9.91□□□□□ -0.82
PTCHD3P1-201ENST00000612350 COLQQ9Y215 455 aaPredicted RBP9.91□□□□□ -0.82
PTCHD3P1-201ENST00000612350 UBR2Q8IWV8 1755 aa9.91□□□□□ -0.82
PTCHD3P1-201ENST00000612350 RNMTO43148 476 aaKnown RBP9.9□□□□□ -0.82
PTCHD3P1-201ENST00000612350 ALDH1B1P30837 517 aa9.9□□□□□ -0.82
PTCHD3P1-201ENST00000612350 NBPF5PQ86XG9 351 aaPredicted RBP9.9□□□□□ -0.82
PTCHD3P1-201ENST00000612350 LARGE2Q8N3Y3 721 aa9.9□□□□□ -0.82
PTCHD3P1-201ENST00000612350 SLC17A8Q8NDX2 589 aa9.9□□□□□ -0.82
PTCHD3P1-201ENST00000612350 TSPYL2Q9H2G4 693 aaPredicted RBP9.9□□□□□ -0.82
PTCHD3P1-201ENST00000612350 CC2D2BQ6DHV5 1058 aa9.89□□□□□ -0.83
PTCHD3P1-201ENST00000612350 FBXO46Q6PJ61 603 aaPredicted RBP9.89□□□□□ -0.83
PTCHD3P1-201ENST00000612350 USP48Q86UV5 1035 aa9.89□□□□□ -0.83
PTCHD3P1-201ENST00000612350 ZNF330Q9Y3S2 320 aaPredicted RBP9.89□□□□□ -0.83
PTCHD3P1-201ENST00000612350 POLR2AP24928 1970 aaKnown RBP9.88□□□□□ -0.83
PTCHD3P1-201ENST00000612350 POTEFA5A3E0 1075 aa9.88□□□□□ -0.83
PTCHD3P1-201ENST00000612350 A1BGP04217 495 aa9.88□□□□□ -0.83
PTCHD3P1-201ENST00000612350 SLC10A3P09131 477 aa9.88□□□□□ -0.83
PTCHD3P1-201ENST00000612350 GMPSP49915 693 aaPredicted RBP9.88□□□□□ -0.83
PTCHD3P1-201ENST00000612350 ZNF157P51786 506 aaPredicted RBP9.88□□□□□ -0.83
PTCHD3P1-201ENST00000612350 CXCL9Q07325 125 aa9.88□□□□□ -0.83
PTCHD3P1-201ENST00000612350 TRPM4Q8TD43 1214 aa9.88□□□□□ -0.83
PTCHD3P1-201ENST00000612350 ZNF296Q8WUU4 475 aaPredicted RBP9.88□□□□□ -0.83
PTCHD3P1-201ENST00000612350 GBA2Q9HCG7 927 aaPredicted RBP9.88□□□□□ -0.83
PTCHD3P1-201ENST00000612350 HDAC9Q9UKV0 1011 aa9.88□□□□□ -0.83
PTCHD3P1-201ENST00000612350 NPC1L1Q9UHC9 1359 aa9.88□□□□□ -0.83
PTCHD3P1-201ENST00000612350 TRIOBPQ9H2D6 2365 aa9.87□□□□□ -0.83
PTCHD3P1-201ENST00000612350 TNNT2P45379 298 aaPredicted RBP9.87□□□□□ -0.83
PTCHD3P1-201ENST00000612350 SULT6B1Q6IMI4 303 aa9.87□□□□□ -0.83
PTCHD3P1-201ENST00000612350 CLEC4GQ6UXB4 293 aa9.87□□□□□ -0.83
PTCHD3P1-201ENST00000612350 TPTE2Q6XPS3 522 aa9.87□□□□□ -0.83
PTCHD3P1-201ENST00000612350 SLC51AQ86UW1 340 aa9.87□□□□□ -0.83
PTCHD3P1-201ENST00000612350 NIM1KQ8IY84 436 aa9.87□□□□□ -0.83
PTCHD3P1-201ENST00000612350 ZNF496Q96IT1 587 aaPredicted RBP9.87□□□□□ -0.83
PTCHD3P1-201ENST00000612350 KIAA0100Q14667 2235 aaKnown RBP9.86□□□□□ -0.83
PTCHD3P1-201ENST00000612350 CRY2Q49AN0 593 aa9.86□□□□□ -0.83
PTCHD3P1-201ENST00000612350 GRIPAP1Q4V328 841 aa9.86□□□□□ -0.83
PTCHD3P1-201ENST00000612350 DZIP3Q86Y13 1208 aaKnown RBP9.86□□□□□ -0.83
PTCHD3P1-201ENST00000612350 PLCD3Q8N3E9 789 aa9.86□□□□□ -0.83
PTCHD3P1-201ENST00000612350 C2orf69Q8N8R5 385 aa9.86□□□□□ -0.83
PTCHD3P1-201ENST00000612350 MS4A3Q96HJ5 214 aa9.86□□□□□ -0.83
PTCHD3P1-201ENST00000612350 TEX13AQ9BXU3 409 aaPredicted RBP9.86□□□□□ -0.83
PTCHD3P1-201ENST00000612350 HEG1Q9ULI3 1381 aa9.86□□□□□ -0.83
PTCHD3P1-201ENST00000612350 CDHR2Q9BYE9 1310 aa9.85□□□□□ -0.83
PTCHD3P1-201ENST00000612350 CLSPNQ9HAW4 1339 aa9.85□□□□□ -0.83
PTCHD3P1-201ENST00000612350 SHTN1A0MZ66 631 aa9.85□□□□□ -0.83
PTCHD3P1-201ENST00000612350 TBC1D8O95759 1140 aa9.85□□□□□ -0.83
PTCHD3P1-201ENST00000612350 NOM1Q5C9Z4 860 aaKnown RBP9.85□□□□□ -0.83
PTCHD3P1-201ENST00000612350 OTUD5Q96G74 571 aa9.85□□□□□ -0.83
PTCHD3P1-201ENST00000612350 ZBTB47Q9UFB7 747 aaPredicted RBP9.85□□□□□ -0.83
PTCHD3P1-201ENST00000612350 ZNRF3Q9ULT6 936 aa9.85□□□□□ -0.83
PTCHD3P1-201ENST00000612350 GPR25O00155 361 aa9.84□□□□□ -0.83
PTCHD3P1-201ENST00000612350 PPIP5K2O43314 1243 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms