RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 FAM177BA6PVY3 158 aa24.44■■□□□ 1.5
SRRM3-205ENST00000612155 DDRGK1Q96HY6 314 aa24.44■■□□□ 1.5
SRRM3-205ENST00000612155 USP42Q9H9J4 1324 aaKnown RBP24.44■■□□□ 1.5
SRRM3-205ENST00000612155 SLC4A3P48751 1232 aa24.43■■□□□ 1.5
SRRM3-205ENST00000612155 RTL5Q5HYW3 569 aaPredicted RBP24.43■■□□□ 1.5
SRRM3-205ENST00000612155 CHD1LQ86WJ1 897 aa24.43■■□□□ 1.5
SRRM3-205ENST00000612155 SRCIN1Q9C0H9 1055 aa24.42■■□□□ 1.5
SRRM3-205ENST00000612155 ATP10DQ9P241 1426 aa24.42■■□□□ 1.5
SRRM3-205ENST00000612155 ERVV-1B6SEH8 477 aa24.42■■□□□ 1.5
SRRM3-205ENST00000612155 TCIRG1Q13488 830 aa24.42■■□□□ 1.5
SRRM3-205ENST00000612155 MSL1Q68DK7 614 aa24.42■■□□□ 1.5
SRRM3-205ENST00000612155 ADRA2BP18089 450 aa24.41■■□□□ 1.5
SRRM3-205ENST00000612155 NEXNQ0ZGT2 675 aa24.41■■□□□ 1.5
SRRM3-205ENST00000612155 TBC1D9BQ66K14 1250 aa24.41■■□□□ 1.5
SRRM3-205ENST00000612155 BCORQ6W2J9 1755 aa24.41■■□□□ 1.5
SRRM3-205ENST00000612155 GYS1P13807 737 aa24.4■■□□□ 1.5
SRRM3-205ENST00000612155 R3HDM1Q15032 1099 aaKnown RBP24.4■■□□□ 1.5
SRRM3-205ENST00000612155 GCC1Q96CN9 775 aa24.4■■□□□ 1.5
SRRM3-205ENST00000612155 PSDA5PKW4 1024 aaPredicted RBP24.4■■□□□ 1.5
SRRM3-205ENST00000612155 NEURL1BA8MQ27 555 aa24.4■■□□□ 1.5
SRRM3-205ENST00000612155 MEIS3Q99687 375 aa24.4■■□□□ 1.5
SRRM3-205ENST00000612155 SRCAPQ6ZRS2 3230 aa24.4■■□□□ 1.5
SRRM3-205ENST00000612155 UBN2Q6ZU65 1347 aa24.4■■□□□ 1.5
SRRM3-205ENST00000612155 ANKRD45Q5TZF3 282 aa24.39■■□□□ 1.5
SRRM3-205ENST00000612155 LINS1Q8NG48 757 aa24.39■■□□□ 1.5
SRRM3-205ENST00000612155 NIP7Q9Y221 180 aaKnown RBP eCLIP24.39■■□□□ 1.5
SRRM3-205ENST00000612155 SCN7AQ01118 1682 aa24.39■■□□□ 1.5
SRRM3-205ENST00000612155 CCT4P50991 539 aaKnown RBP24.39■■□□□ 1.49
SRRM3-205ENST00000612155 AFDNP55196 1824 aaKnown RBP24.38■■□□□ 1.49
SRRM3-205ENST00000612155 SYNE4Q8N205 404 aa24.37■■□□□ 1.49
SRRM3-205ENST00000612155 HMGB2P26583 209 aaKnown RBP24.37■■□□□ 1.49
SRRM3-205ENST00000612155 ISCA1Q9BUE6 129 aa24.37■■□□□ 1.49
SRRM3-205ENST00000612155 PXDNLA1KZ92 1463 aa24.36■■□□□ 1.49
SRRM3-205ENST00000612155 NBPF7P0C2Y1 421 aaPredicted RBP24.36■■□□□ 1.49
SRRM3-205ENST00000612155 ZNF34Q8IZ26 560 aa24.36■■□□□ 1.49
SRRM3-205ENST00000612155 ZNF652Q9Y2D9 606 aa24.36■■□□□ 1.49
SRRM3-205ENST00000612155 NLRP10Q86W26 655 aa24.36■■□□□ 1.49
SRRM3-205ENST00000612155 ANKRD44Q8N8A2 993 aa24.36■■□□□ 1.49
SRRM3-205ENST00000612155 USP44Q9H0E7 712 aa24.36■■□□□ 1.49
SRRM3-205ENST00000612155 GCKRQ14397 625 aa24.35■■□□□ 1.49
SRRM3-205ENST00000612155 CEP85Q6P2H3 762 aa24.35■■□□□ 1.49
SRRM3-205ENST00000612155 CCDC24Q8N4L8 307 aa24.35■■□□□ 1.49
SRRM3-205ENST00000612155 SUSD4Q5VX71 490 aa24.35■■□□□ 1.49
SRRM3-205ENST00000612155 FLAD1Q8NFF5 587 aa24.35■■□□□ 1.49
SRRM3-205ENST00000612155 ANKRD36CQ5JPF3 1778 aa24.34■■□□□ 1.49
SRRM3-205ENST00000612155 NFIXQ14938 502 aa24.34■■□□□ 1.49
SRRM3-205ENST00000612155 CLEC4GQ6UXB4 293 aa24.34■■□□□ 1.49
SRRM3-205ENST00000612155 DCTPP1Q9H773 170 aa24.34■■□□□ 1.49
SRRM3-205ENST00000612155 CWC25Q9NXE8 425 aaPredicted RBP24.34■■□□□ 1.49
SRRM3-205ENST00000612155 C9orf78Q9NZ63 289 aaPredicted RBP24.34■■□□□ 1.49
SRRM3-205ENST00000612155 HSP90AB3PQ58FF7 597 aa24.33■■□□□ 1.49
SRRM3-205ENST00000612155 FAM89AQ96GI7 184 aa24.33■■□□□ 1.49
SRRM3-205ENST00000612155 TBC1D32Q96NH3 1257 aa24.33■■□□□ 1.49
SRRM3-205ENST00000612155 ALDH1L1O75891 902 aa24.32■■□□□ 1.48
SRRM3-205ENST00000612155 NBR1Q14596 966 aa24.32■■□□□ 1.48
SRRM3-205ENST00000612155 UBE3BQ7Z3V4 1068 aa24.32■■□□□ 1.48
SRRM3-205ENST00000612155 NUTM1Q86Y26 1132 aa24.32■■□□□ 1.48
SRRM3-205ENST00000612155 N4BP2Q86UW6 1770 aaPredicted RBP24.32■■□□□ 1.48
SRRM3-205ENST00000612155 CCDC191Q8NCU4 936 aa24.32■■□□□ 1.48
SRRM3-205ENST00000612155 SETDB2Q96T68 719 aa24.32■■□□□ 1.48
SRRM3-205ENST00000612155 GRM8O00222 908 aa24.3■■□□□ 1.48
SRRM3-205ENST00000612155 ZBTB7AO95365 584 aa24.3■■□□□ 1.48
SRRM3-205ENST00000612155 TRMT112Q9UI30 125 aaKnown RBP24.3■■□□□ 1.48
SRRM3-205ENST00000612155 GOLGB1Q14789 3259 aaKnown RBP24.3■■□□□ 1.48
SRRM3-205ENST00000612155 RPAP2Q8IXW5 612 aaPredicted RBP24.3■■□□□ 1.48
SRRM3-205ENST00000612155 DDR1Q08345 913 aa24.29■■□□□ 1.48
SRRM3-205ENST00000612155 TRIM28Q13263 835 aaKnown RBP24.29■■□□□ 1.48
SRRM3-205ENST00000612155 QSER1Q2KHR3 1735 aa24.29■■□□□ 1.48
SRRM3-205ENST00000612155 UBTFL1P0CB47 393 aaPredicted RBP24.27■■□□□ 1.48
SRRM3-205ENST00000612155 LRRFIP2Q9Y608 721 aaKnown RBP24.27■■□□□ 1.48
SRRM3-205ENST00000612155 NTSR2O95665 410 aa24.27■■□□□ 1.48
SRRM3-205ENST00000612155 TM4SF1P30408 202 aa24.27■■□□□ 1.48
SRRM3-205ENST00000612155 SUCLG2Q96I99 432 aa24.27■■□□□ 1.48
SRRM3-205ENST00000612155 MMP10P09238 476 aa24.26■■□□□ 1.47
SRRM3-205ENST00000612155 BMP2KLQ5H9B9 411 aa24.26■■□□□ 1.47
SRRM3-205ENST00000612155 NBPF5PQ86XG9 351 aaPredicted RBP24.26■■□□□ 1.47
SRRM3-205ENST00000612155 UTP14AQ9BVJ6 771 aaKnown RBP24.26■■□□□ 1.47
SRRM3-205ENST00000612155 ATF5Q9Y2D1 282 aaPredicted RBP24.26■■□□□ 1.47
SRRM3-205ENST00000612155 CASP7P55210 303 aa24.26■■□□□ 1.47
SRRM3-205ENST00000612155 C16orf71Q8IYS4 520 aaPredicted RBP24.26■■□□□ 1.47
SRRM3-205ENST00000612155 NLGN1Q8N2Q7 840 aa24.26■■□□□ 1.47
SRRM3-205ENST00000612155 H7C1W4 665 aa24.25■■□□□ 1.47
SRRM3-205ENST00000612155 HCLS1P14317 486 aaPredicted RBP24.25■■□□□ 1.47
SRRM3-205ENST00000612155 ERFEQ4G0M1 354 aa24.25■■□□□ 1.47
SRRM3-205ENST00000612155 PARP10Q53GL7 1025 aa24.25■■□□□ 1.47
SRRM3-205ENST00000612155 EPHA10Q5JZY3 1008 aa24.25■■□□□ 1.47
SRRM3-205ENST00000612155 KAZALD1Q96I82 304 aa24.25■■□□□ 1.47
SRRM3-205ENST00000612155 POLRMTO00411 1230 aaKnown RBP24.25■■□□□ 1.47
SRRM3-205ENST00000612155 ZBTB38Q8NAP3 1195 aaPredicted RBP24.25■■□□□ 1.47
SRRM3-205ENST00000612155 NPHP1O15259 732 aa24.24■■□□□ 1.47
SRRM3-205ENST00000612155 MFAP1P55081 439 aaKnown RBP24.24■■□□□ 1.47
SRRM3-205ENST00000612155 PPP1R42Q7Z4L9 355 aa24.24■■□□□ 1.47
SRRM3-205ENST00000612155 PLEKHM2Q8IWE5 1019 aa24.24■■□□□ 1.47
SRRM3-205ENST00000612155 CCDC85AQ96PX6 553 aaPredicted RBP24.24■■□□□ 1.47
SRRM3-205ENST00000612155 SERPINB2P05120 415 aa24.23■■□□□ 1.47
SRRM3-205ENST00000612155 GTF2E1P29083 439 aaPredicted RBP24.23■■□□□ 1.47
SRRM3-205ENST00000612155 CARMIL3Q8ND23 1372 aa24.23■■□□□ 1.47
SRRM3-205ENST00000612155 PCCAP05165 728 aaPredicted RBP24.23■■□□□ 1.47
SRRM3-205ENST00000612155 GNAI3P08754 354 aa24.23■■□□□ 1.47
SRRM3-205ENST00000612155 OTUD7AQ8TE49 926 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms