RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 BMP2KQ9NSY1 1161 aaPredicted RBP10.19□□□□□ -0.78
TARDBP-213ENST00000611963 MAP3K2Q9Y2U5 619 aa10.19□□□□□ -0.78
TARDBP-213ENST00000611963 COL5A3P25940 1745 aaPredicted RBP10.19□□□□□ -0.78
TARDBP-213ENST00000611963 ERBB4Q15303 1308 aa10.18□□□□□ -0.78
TARDBP-213ENST00000611963 ATN1P54259 1190 aaPredicted RBP10.18□□□□□ -0.78
TARDBP-213ENST00000611963 VSIG10Q8N0Z9 540 aa10.18□□□□□ -0.78
TARDBP-213ENST00000611963 CHMP4BQ9H444 224 aaKnown RBP10.18□□□□□ -0.78
TARDBP-213ENST00000611963 CICQ96RK0 1608 aaPredicted RBP10.18□□□□□ -0.78
TARDBP-213ENST00000611963 ATP10DQ9P241 1426 aa10.17□□□□□ -0.78
TARDBP-213ENST00000611963 ATMINO43313 823 aaPredicted RBP10.17□□□□□ -0.78
TARDBP-213ENST00000611963 STARD3NLO95772 234 aa10.17□□□□□ -0.78
TARDBP-213ENST00000611963 DDX58O95786 925 aaKnown RBP10.17□□□□□ -0.78
TARDBP-213ENST00000611963 BEND3Q5T5X7 828 aa10.17□□□□□ -0.78
TARDBP-213ENST00000611963 TTLL7Q6ZT98 887 aa10.17□□□□□ -0.78
TARDBP-213ENST00000611963 RIC3Q7Z5B4 369 aa10.17□□□□□ -0.78
TARDBP-213ENST00000611963 TEX13AQ9BXU3 409 aaPredicted RBP10.17□□□□□ -0.78
TARDBP-213ENST00000611963 SRCIN1Q9C0H9 1055 aa10.17□□□□□ -0.78
TARDBP-213ENST00000611963 PPP1R1BQ9UD71 204 aaPredicted RBP10.17□□□□□ -0.78
TARDBP-213ENST00000611963 TAF1LQ8IZX4 1826 aa10.17□□□□□ -0.78
TARDBP-213ENST00000611963 LOC102724428A0A0B4J2F2 783 aa10.16□□□□□ -0.78
TARDBP-213ENST00000611963 CYP19A1P11511 503 aaPredicted RBP10.16□□□□□ -0.78
TARDBP-213ENST00000611963 SIK1P57059 783 aa10.16□□□□□ -0.78
TARDBP-213ENST00000611963 ITPK1Q13572 414 aa10.16□□□□□ -0.78
TARDBP-213ENST00000611963 AMIGO3Q86WK7 504 aa10.16□□□□□ -0.78
TARDBP-213ENST00000611963 SIRT2Q8IXJ6 389 aa10.16□□□□□ -0.78
TARDBP-213ENST00000611963 SMARCC1Q92922 1105 aaPredicted RBP10.16□□□□□ -0.78
TARDBP-213ENST00000611963 RWDD1Q9H446 243 aaPredicted RBP10.16□□□□□ -0.78
TARDBP-213ENST00000611963 ZNF330Q9Y3S2 320 aaPredicted RBP10.16□□□□□ -0.78
TARDBP-213ENST00000611963 NUP98P52948 1817 aa10.16□□□□□ -0.78
TARDBP-213ENST00000611963 COL24A1Q17RW2 1714 aa10.16□□□□□ -0.78
TARDBP-213ENST00000611963 ZNF831Q5JPB2 1677 aa10.15□□□□□ -0.78
TARDBP-213ENST00000611963 ATP6V1AP38606 617 aa10.15□□□□□ -0.78
TARDBP-213ENST00000611963 HDAC1Q13547 482 aaPredicted RBP10.15□□□□□ -0.78
TARDBP-213ENST00000611963 CWF19L2Q2TBE0 894 aaKnown RBP10.15□□□□□ -0.78
TARDBP-213ENST00000611963 ANKRD13DQ6ZTN6 518 aa10.15□□□□□ -0.78
TARDBP-213ENST00000611963 COL23A1Q86Y22 540 aaPredicted RBP10.15□□□□□ -0.78
TARDBP-213ENST00000611963 MYD88Q99836 296 aa10.15□□□□□ -0.78
TARDBP-213ENST00000611963 USP44Q9H0E7 712 aa10.15□□□□□ -0.78
TARDBP-213ENST00000611963 TFCP2L1Q9NZI6 479 aa10.15□□□□□ -0.78
TARDBP-213ENST00000611963 ZBTB1Q9Y2K1 713 aa10.15□□□□□ -0.78
TARDBP-213ENST00000611963 C4BP0C0L5 1744 aa10.15□□□□□ -0.78
TARDBP-213ENST00000611963 ANKRD36CQ5JPF3 1778 aa10.14□□□□□ -0.79
TARDBP-213ENST00000611963 ALDH1L1O75891 902 aa10.14□□□□□ -0.79
TARDBP-213ENST00000611963 GNAI2P04899 355 aa10.14□□□□□ -0.79
TARDBP-213ENST00000611963 IGKV5-2P06315 115 aa10.14□□□□□ -0.79
TARDBP-213ENST00000611963 GNAI3P08754 354 aa10.14□□□□□ -0.79
TARDBP-213ENST00000611963 CEP85Q6P2H3 762 aa10.14□□□□□ -0.79
TARDBP-213ENST00000611963 SMIM5Q71RC9 77 aa10.14□□□□□ -0.79
TARDBP-213ENST00000611963 ANKRD44Q8N8A2 993 aa10.14□□□□□ -0.79
TARDBP-213ENST00000611963 PLBD2Q8NHP8 589 aa10.14□□□□□ -0.79
TARDBP-213ENST00000611963 SLC16A10Q8TF71 515 aa10.14□□□□□ -0.79
TARDBP-213ENST00000611963 METTL22Q9BUU2 404 aaPredicted RBP10.14□□□□□ -0.79
TARDBP-213ENST00000611963 FHDC1Q9C0D6 1143 aaPredicted RBP10.14□□□□□ -0.79
TARDBP-213ENST00000611963 LRRFIP2Q9Y608 721 aaKnown RBP10.14□□□□□ -0.79
TARDBP-213ENST00000611963 TTLL13PA6NNM8 815 aa10.13□□□□□ -0.79
TARDBP-213ENST00000611963 NEURL1BA8MQ27 555 aa10.13□□□□□ -0.79
TARDBP-213ENST00000611963 ATP5J2-PTCD1G3V325 749 aa10.13□□□□□ -0.79
TARDBP-213ENST00000611963 UBTFL1P0CB47 393 aaPredicted RBP10.13□□□□□ -0.79
TARDBP-213ENST00000611963 CRKLP46109 303 aaKnown RBP10.13□□□□□ -0.79
TARDBP-213ENST00000611963 ASTLQ6HA08 431 aaPredicted RBP10.13□□□□□ -0.79
TARDBP-213ENST00000611963 INTS5Q6P9B9 1019 aaKnown RBP10.13□□□□□ -0.79
TARDBP-213ENST00000611963 LINC00116Q8NCU8 138 aa10.13□□□□□ -0.79
TARDBP-213ENST00000611963 LINS1Q8NG48 757 aa10.13□□□□□ -0.79
TARDBP-213ENST00000611963 ZBTB3Q9H5J0 574 aa10.13□□□□□ -0.79
TARDBP-213ENST00000611963 PDZRN3Q9UPQ7 1066 aa10.13□□□□□ -0.79
TARDBP-213ENST00000611963 NBPF7P0C2Y1 421 aaPredicted RBP10.12□□□□□ -0.79
TARDBP-213ENST00000611963 CHRM1P11229 460 aaPredicted RBP10.12□□□□□ -0.79
TARDBP-213ENST00000611963 NEXNQ0ZGT2 675 aa10.12□□□□□ -0.79
TARDBP-213ENST00000611963 KIF6Q6ZMV9 814 aa10.12□□□□□ -0.79
TARDBP-213ENST00000611963 ARXQ96QS3 562 aa10.12□□□□□ -0.79
TARDBP-213ENST00000611963 SYT17Q9BSW7 474 aa10.12□□□□□ -0.79
TARDBP-213ENST00000611963 TMEM106CQ9BVX2 250 aa10.12□□□□□ -0.79
TARDBP-213ENST00000611963 CCDC87Q9NVE4 849 aa10.12□□□□□ -0.79
TARDBP-213ENST00000611963 C9orf78Q9NZ63 289 aaPredicted RBP10.12□□□□□ -0.79
TARDBP-213ENST00000611963 UBR3Q6ZT12 1888 aa10.11□□□□□ -0.79
TARDBP-213ENST00000611963 RGS3P49796 1198 aa10.11□□□□□ -0.79
TARDBP-213ENST00000611963 SMC5Q8IY18 1101 aa10.11□□□□□ -0.79
TARDBP-213ENST00000611963 JARID2Q92833 1246 aaPredicted RBP10.11□□□□□ -0.79
TARDBP-213ENST00000611963 RNF25Q96BH1 459 aaPredicted RBP10.11□□□□□ -0.79
TARDBP-213ENST00000611963 BCORQ6W2J9 1755 aa10.11□□□□□ -0.79
TARDBP-213ENST00000611963 MAP3K15Q6ZN16 1313 aa10.1□□□□□ -0.79
TARDBP-213ENST00000611963 PNMA6EA0A0J9YXQ4 647 aa10.1□□□□□ -0.79
TARDBP-213ENST00000611963 GRM8O00222 908 aa10.1□□□□□ -0.79
TARDBP-213ENST00000611963 IL6STP40189 918 aaPredicted RBP10.1□□□□□ -0.79
TARDBP-213ENST00000611963 GCKRQ14397 625 aa10.1□□□□□ -0.79
TARDBP-213ENST00000611963 MSL1Q68DK7 614 aa10.1□□□□□ -0.79
TARDBP-213ENST00000611963 RPAP2Q8IXW5 612 aaPredicted RBP10.1□□□□□ -0.79
TARDBP-213ENST00000611963 SUCLG2Q96I99 432 aa10.1□□□□□ -0.79
TARDBP-213ENST00000611963 AK7Q96M32 723 aa10.1□□□□□ -0.79
TARDBP-213ENST00000611963 TBC1D2BQ9UPU7 963 aa10.1□□□□□ -0.79
TARDBP-213ENST00000611963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.09□□□□□ -0.79
TARDBP-213ENST00000611963 TIE1P35590 1138 aa10.09□□□□□ -0.79
TARDBP-213ENST00000611963 EIF5P55010 431 aaKnown RBP10.09□□□□□ -0.79
TARDBP-213ENST00000611963 ATP8B2P98198 1209 aa10.09□□□□□ -0.79
TARDBP-213ENST00000611963 HLFQ16534 295 aa10.09□□□□□ -0.79
TARDBP-213ENST00000611963 DZIP3Q86Y13 1208 aaKnown RBP10.09□□□□□ -0.79
TARDBP-213ENST00000611963 MYH3P11055 1940 aa10.09□□□□□ -0.79
TARDBP-213ENST00000611963 UTYO14607 1347 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 APBB1O00213 710 aa10.08□□□□□ -0.8
TARDBP-213ENST00000611963 HMMRO75330 724 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms