RNA–Protein interactions for RNA: ENST00000611835.4

GTF2IRD2B-204, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best)

Gene GTF2IRD2B, Length 3,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-204ENST00000611835 CCDC66A2RUB6 948 aa7.53□□□□□ -1.2
GTF2IRD2B-204ENST00000611835 CTIFO43310 598 aaKnown RBP7.53□□□□□ -1.2
GTF2IRD2B-204ENST00000611835 ELF2Q15723 593 aa7.53□□□□□ -1.2
GTF2IRD2B-204ENST00000611835 GRIPAP1Q4V328 841 aa7.53□□□□□ -1.2
GTF2IRD2B-204ENST00000611835 ERCC4Q92889 916 aaPredicted RBP7.53□□□□□ -1.2
GTF2IRD2B-204ENST00000611835 FAM227BQ96M60 508 aa7.53□□□□□ -1.2
GTF2IRD2B-204ENST00000611835 PLCD4Q9BRC7 762 aa7.53□□□□□ -1.2
GTF2IRD2B-204ENST00000611835 CCDC8Q9H0W5 538 aaPredicted RBP7.53□□□□□ -1.2
GTF2IRD2B-204ENST00000611835 BOLA2Q9H3K6 86 aa7.53□□□□□ -1.2
GTF2IRD2B-204ENST00000611835 ECHDC1Q9NTX5 307 aa7.53□□□□□ -1.2
GTF2IRD2B-204ENST00000611835 CPSF1Q10570 1443 aaKnown RBP7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 INO80Q9ULG1 1556 aaPredicted RBP7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 MROH1Q8NDA8 1641 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 GNAT3A8MTJ3 354 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 CREB3L3Q68CJ9 461 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 CCDC73Q6ZRK6 1079 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 CERS3Q8IU89 383 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 SSH3Q8TE77 659 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 LEO1Q8WVC0 666 aaPredicted RBP7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 NPHP3Q7Z494 1330 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 TTC21BQ7Z4L5 1316 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 NEURL4Q96JN8 1562 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 CCDC144BQ3MJ40 725 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 TAF3Q5VWG9 929 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 CC2D2BQ6DHV5 1058 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 CCDC144CPQ8IYA2 1237 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 KIF18AQ8NI77 898 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 SDF4Q9BRK5 362 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 ACEP12821 1306 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 PTPRMP28827 1452 aa7.52□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 TCHHQ07283 1943 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 CCDC69A6NI79 296 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 USP27XA6NNY8 438 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 KINO60870 393 aaKnown RBP7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 SMC2O95347 1197 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 EYA1Q99502 592 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 LRRC2Q9BYS8 371 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 DDX41Q9UJV9 622 aaKnown RBP7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 NEO1Q92859 1461 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 NRDCO43847 1150 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 JAK2O60674 1132 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 ME1P48163 572 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 GABPB1Q06547 395 aaPredicted RBP7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 G3BP1Q13283 466 aaKnown RBP eCLIP7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 USHBP1Q8N6Y0 703 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 ZNF397Q8NF99 534 aaPredicted RBP7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 ZSWIM6Q9HCJ5 1215 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 DIP2BQ9P265 1576 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 KNDC1Q76NI1 1749 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 ZC3H13Q5T200 1668 aaKnown RBP7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 AATKQ6ZMQ8 1374 aa7.51□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 AOX1Q06278 1338 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 CCDC171Q6TFL3 1326 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 NLRP6P59044 892 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 GUCY1B3Q02153 619 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 AIMP1Q12904 312 aaKnown RBP7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 NMIQ13287 307 aaPredicted RBP7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 ANKRD1Q15327 319 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 SF3A1Q15459 793 aaKnown RBP7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 BRF1Q92994 677 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 GTF3C6Q969F1 213 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 CLSTN2Q9H4D0 955 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 CDK12Q9NYV4 1490 aaPredicted RBP7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 POLR3GO15318 223 aaPredicted RBP7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 LRRC8AQ8IWT6 810 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 DNAAF4Q8WXU2 420 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 ST7Q9NRC1 585 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 CHPF2Q9P2E5 772 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 EPB41L2O43491 1005 aaKnown RBP7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 KMT5BQ4FZB7 885 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 FAM177A1Q8N128 213 aaPredicted RBP7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 EVI5LQ96CN4 794 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 CFAP45Q9UL16 551 aa7.5□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 SLC27A2O14975 620 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 COL9A3Q14050 684 aaPredicted RBP7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 TERF2Q15554 542 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 FBXO38Q6PIJ6 1188 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 CCAR1Q8IX12 1150 aaKnown RBP7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 ZBTB9Q96C00 473 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 TIGD1Q96MW7 591 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 PRDM16Q9HAZ2 1276 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 KCNG1Q9UIX4 513 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 NEXMIFQ5QGS0 1516 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 LMTK2Q8IWU2 1503 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 PPLO60437 1756 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 YEATS2Q9ULM3 1422 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 ARHGEF28Q8N1W1 1705 aaKnown RBP7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 BIN1O00499 593 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 SLU7O95391 586 aaKnown RBP7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 TEFQ10587 303 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 SNW1Q13573 536 aaKnown RBP7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 GNL2Q13823 731 aaKnown RBP7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 ERCC6LQ2NKX8 1250 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 C11orf57Q6ZUT1 292 aaPredicted RBP7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 AOPEPQ8N6M6 819 aa7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 TDRD7Q8NHU6 1098 aaKnown RBP7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 NOL10Q9BSC4 688 aaKnown RBP7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 FTOQ9C0B1 505 aaKnown RBP eCLIP7.49□□□□□ -1.21
GTF2IRD2B-204ENST00000611835 SLFN14P0C7P3 912 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms