RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 PDE4AP27815 886 aa16.99■□□□□ 0.31
IRF3-229ENST00000601373 PTF1AQ7RTS3 328 aa16.99■□□□□ 0.31
IRF3-229ENST00000601373 ZNF784Q8NCA9 323 aaPredicted RBP16.99■□□□□ 0.31
IRF3-229ENST00000601373 STK32BQ9NY57 414 aa16.99■□□□□ 0.31
IRF3-229ENST00000601373 CASZ1Q86V15 1759 aa16.99■□□□□ 0.31
IRF3-229ENST00000601373 RGL2O15211 777 aa16.98■□□□□ 0.31
IRF3-229ENST00000601373 PTGER2P43116 358 aa16.98■□□□□ 0.31
IRF3-229ENST00000601373 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
IRF3-229ENST00000601373 KAZALD1Q96I82 304 aa16.98■□□□□ 0.31
IRF3-229ENST00000601373 CCNL1Q9UK58 526 aaPredicted RBP16.98■□□□□ 0.31
IRF3-229ENST00000601373 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
IRF3-229ENST00000601373 COL5A3P25940 1745 aaPredicted RBP16.97■□□□□ 0.31
IRF3-229ENST00000601373 CASP7P55210 303 aa16.97■□□□□ 0.31
IRF3-229ENST00000601373 UBE3BQ7Z3V4 1068 aa16.97■□□□□ 0.31
IRF3-229ENST00000601373 PROM2Q8N271 834 aa16.97■□□□□ 0.31
IRF3-229ENST00000601373 LINC00116Q8NCU8 138 aa16.97■□□□□ 0.31
IRF3-229ENST00000601373 LRRCC1Q9C099 1032 aa16.97■□□□□ 0.31
IRF3-229ENST00000601373 MTFR1LQ9H019 292 aa16.97■□□□□ 0.31
IRF3-229ENST00000601373 BICC1Q9H694 974 aaKnown RBP16.97■□□□□ 0.31
IRF3-229ENST00000601373 SURF6O75683 361 aaKnown RBP16.96■□□□□ 0.31
IRF3-229ENST00000601373 ZBTB7AO95365 584 aa16.96■□□□□ 0.31
IRF3-229ENST00000601373 SLC15A2Q16348 729 aa16.96■□□□□ 0.31
IRF3-229ENST00000601373 RABL6Q3YEC7 729 aaPredicted RBP16.96■□□□□ 0.31
IRF3-229ENST00000601373 BACH2Q9BYV9 841 aa16.96■□□□□ 0.31
IRF3-229ENST00000601373 TBC1D2BQ9UPU7 963 aa16.96■□□□□ 0.31
IRF3-229ENST00000601373 EXOC6BQ9Y2D4 811 aa16.96■□□□□ 0.31
IRF3-229ENST00000601373 PCCAP05165 728 aaPredicted RBP16.95■□□□□ 0.3
IRF3-229ENST00000601373 HLFQ16534 295 aa16.95■□□□□ 0.3
IRF3-229ENST00000601373 TXNRD1Q16881 649 aa16.95■□□□□ 0.3
IRF3-229ENST00000601373 ERC1Q8IUD2 1116 aa16.95■□□□□ 0.3
IRF3-229ENST00000601373 SYT17Q9BSW7 474 aa16.95■□□□□ 0.3
IRF3-229ENST00000601373 MYH14Q7Z406 1995 aaKnown RBP16.95■□□□□ 0.3
IRF3-229ENST00000601373 LY75O60449 1722 aa16.94■□□□□ 0.3
IRF3-229ENST00000601373 RPS6KA4O75676 772 aa16.94■□□□□ 0.3
IRF3-229ENST00000601373 ZNF34Q8IZ26 560 aa16.94■□□□□ 0.3
IRF3-229ENST00000601373 ZBTB38Q8NAP3 1195 aaPredicted RBP16.94■□□□□ 0.3
IRF3-229ENST00000601373 KIF1BPQ96EK5 621 aa16.94■□□□□ 0.3
IRF3-229ENST00000601373 ZNF652Q9Y2D9 606 aa16.94■□□□□ 0.3
IRF3-229ENST00000601373 UTRNP46939 3433 aa16.93■□□□□ 0.3
IRF3-229ENST00000601373 APBB1O00213 710 aa16.93■□□□□ 0.3
IRF3-229ENST00000601373 CAMTA2O94983 1202 aa16.93■□□□□ 0.3
IRF3-229ENST00000601373 SLC27A3Q5K4L6 730 aa16.93■□□□□ 0.3
IRF3-229ENST00000601373 CLEC4GQ6UXB4 293 aa16.93■□□□□ 0.3
IRF3-229ENST00000601373 NLRP10Q86W26 655 aa16.93■□□□□ 0.3
IRF3-229ENST00000601373 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
IRF3-229ENST00000601373 NUP98P52948 1817 aa16.92■□□□□ 0.3
IRF3-229ENST00000601373 PARP10Q53GL7 1025 aa16.92■□□□□ 0.3
IRF3-229ENST00000601373 EPHA10Q5JZY3 1008 aa16.92■□□□□ 0.3
IRF3-229ENST00000601373 PLA2G12BQ9BX93 195 aa16.92■□□□□ 0.3
IRF3-229ENST00000601373 FHDC1Q9C0D6 1143 aaPredicted RBP16.92■□□□□ 0.3
IRF3-229ENST00000601373 PDGFDQ9GZP0 370 aaPredicted RBP16.92■□□□□ 0.3
IRF3-229ENST00000601373 CDHR2Q9BYE9 1310 aa16.92■□□□□ 0.3
IRF3-229ENST00000601373 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
IRF3-229ENST00000601373 SMARCA5O60264 1052 aaPredicted RBP16.91■□□□□ 0.3
IRF3-229ENST00000601373 FOXO4P98177 505 aa16.91■□□□□ 0.3
IRF3-229ENST00000601373 G3BP1Q13283 466 aaKnown RBP eCLIP16.91■□□□□ 0.3
IRF3-229ENST00000601373 OS9Q13438 667 aaPredicted RBP16.91■□□□□ 0.3
IRF3-229ENST00000601373 BMP2KLQ5H9B9 411 aa16.91■□□□□ 0.3
IRF3-229ENST00000601373 PLEKHM2Q8IWE5 1019 aa16.91■□□□□ 0.3
IRF3-229ENST00000601373 RHPN1Q8TCX5 695 aa16.91■□□□□ 0.3
IRF3-229ENST00000601373 JARID2Q92833 1246 aaPredicted RBP16.91■□□□□ 0.3
IRF3-229ENST00000601373 SGIP1Q9BQI5 828 aa16.91■□□□□ 0.3
IRF3-229ENST00000601373 COPRSQ9NQ92 184 aa16.91■□□□□ 0.3
IRF3-229ENST00000601373 RTCBQ9Y3I0 505 aaKnown RBP16.91■□□□□ 0.3
IRF3-229ENST00000601373 RBM19Q9Y4C8 960 aaKnown RBP16.91■□□□□ 0.3
IRF3-229ENST00000601373 HSP90B1P14625 803 aaKnown RBP16.9■□□□□ 0.3
IRF3-229ENST00000601373 GPTP24298 496 aa16.9■□□□□ 0.3
IRF3-229ENST00000601373 C1QTNF8P60827 252 aa16.9■□□□□ 0.3
IRF3-229ENST00000601373 C8orf34Q49A92 452 aa16.9■□□□□ 0.3
IRF3-229ENST00000601373 LMBR1LQ6UX01 489 aa16.9■□□□□ 0.3
IRF3-229ENST00000601373 OSBPL3Q9H4L5 887 aa16.9■□□□□ 0.3
IRF3-229ENST00000601373 KCNQ4P56696 695 aa16.89■□□□□ 0.29
IRF3-229ENST00000601373 AK7Q96M32 723 aa16.89■□□□□ 0.29
IRF3-229ENST00000601373 NARFQ9UHQ1 456 aa16.89■□□□□ 0.29
IRF3-229ENST00000601373 TRMT112Q9UI30 125 aaKnown RBP16.89■□□□□ 0.29
IRF3-229ENST00000601373 GNPATO15228 680 aa16.88■□□□□ 0.29
IRF3-229ENST00000601373 RFX5P48382 616 aaPredicted RBP16.88■□□□□ 0.29
IRF3-229ENST00000601373 C16orf71Q8IYS4 520 aaPredicted RBP16.88■□□□□ 0.29
IRF3-229ENST00000601373 TAF1LQ8IZX4 1826 aa16.87■□□□□ 0.29
IRF3-229ENST00000601373 RTL5Q5HYW3 569 aaPredicted RBP16.87■□□□□ 0.29
IRF3-229ENST00000601373 CLASRPQ8N2M8 674 aaKnown RBP16.87■□□□□ 0.29
IRF3-229ENST00000601373 FAM89AQ96GI7 184 aa16.87■□□□□ 0.29
IRF3-229ENST00000601373 UTP14AQ9BVJ6 771 aaKnown RBP16.87■□□□□ 0.29
IRF3-229ENST00000601373 PA2G4Q9UQ80 394 aaKnown RBP16.87■□□□□ 0.29
IRF3-229ENST00000601373 CHD4Q14839 1912 aa16.87■□□□□ 0.29
IRF3-229ENST00000601373 ZPR1O75312 459 aa16.86■□□□□ 0.29
IRF3-229ENST00000601373 CSF1RP07333 972 aa16.86■□□□□ 0.29
IRF3-229ENST00000601373 PDE1AP54750 535 aa16.86■□□□□ 0.29
IRF3-229ENST00000601373 PTPN12Q05209 780 aaKnown RBP16.86■□□□□ 0.29
IRF3-229ENST00000601373 TRAPPC3LQ5T215 181 aa16.86■□□□□ 0.29
IRF3-229ENST00000601373 TTC22Q5TAA0 569 aa16.86■□□□□ 0.29
IRF3-229ENST00000601373 STAP2Q9UGK3 403 aa16.86■□□□□ 0.29
IRF3-229ENST00000601373 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
IRF3-229ENST00000601373 NIP7Q9Y221 180 aaKnown RBP eCLIP16.86■□□□□ 0.29
IRF3-229ENST00000601373 CHMP3Q9Y3E7 222 aa16.86■□□□□ 0.29
IRF3-229ENST00000601373 AOX1Q06278 1338 aa16.86■□□□□ 0.29
IRF3-229ENST00000601373 UBN2Q6ZU65 1347 aa16.86■□□□□ 0.29
IRF3-229ENST00000601373 IRS4O14654 1257 aaPredicted RBP16.85■□□□□ 0.29
IRF3-229ENST00000601373 PDE8AO60658 829 aa16.85■□□□□ 0.29
IRF3-229ENST00000601373 EIF5BO60841 1220 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms