RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 DDX54Q8TDD1 881 aaKnown RBP17.33■□□□□ 0.37
SMG9-211ENST00000601170 RAPGEF4Q8WZA2 1011 aa17.33■□□□□ 0.37
SMG9-211ENST00000601170 SLC52A2Q9HAB3 445 aa17.33■□□□□ 0.37
SMG9-211ENST00000601170 SH2B1Q9NRF2 756 aaPredicted RBP17.33■□□□□ 0.37
SMG9-211ENST00000601170 NPHP3Q7Z494 1330 aa17.33■□□□□ 0.37
SMG9-211ENST00000601170 NEURL1BA8MQ27 555 aa17.33■□□□□ 0.36
SMG9-211ENST00000601170 DTNBO60941 627 aa17.33■□□□□ 0.36
SMG9-211ENST00000601170 KCNJ4P48050 445 aa17.33■□□□□ 0.36
SMG9-211ENST00000601170 NEXNQ0ZGT2 675 aa17.33■□□□□ 0.36
SMG9-211ENST00000601170 CREB3L3Q68CJ9 461 aa17.33■□□□□ 0.36
SMG9-211ENST00000601170 MAP4K1Q92918 833 aa17.33■□□□□ 0.36
SMG9-211ENST00000601170 ATP6V1DQ9Y5K8 247 aa17.33■□□□□ 0.36
SMG9-211ENST00000601170 C1orf167Q5SNV9 1468 aa17.33■□□□□ 0.36
SMG9-211ENST00000601170 OFD1O75665 1012 aa17.32■□□□□ 0.36
SMG9-211ENST00000601170 BOLA2Q9H3K6 86 aa17.32■□□□□ 0.36
SMG9-211ENST00000601170 ALS2Q96Q42 1657 aa17.32■□□□□ 0.36
SMG9-211ENST00000601170 FIBPO43427 364 aa17.32■□□□□ 0.36
SMG9-211ENST00000601170 UBE2HP62256 183 aa17.32■□□□□ 0.36
SMG9-211ENST00000601170 ST3GAL1Q11201 340 aa17.32■□□□□ 0.36
SMG9-211ENST00000601170 TPRNQ4KMQ1 711 aa17.32■□□□□ 0.36
SMG9-211ENST00000601170 CCDC183Q5T5S1 534 aa17.32■□□□□ 0.36
SMG9-211ENST00000601170 XAGE3Q8WTP9 111 aa17.32■□□□□ 0.36
SMG9-211ENST00000601170 FSD1Q9BTV5 496 aa17.32■□□□□ 0.36
SMG9-211ENST00000601170 ZKSCAN5Q9Y2L8 839 aa17.32■□□□□ 0.36
SMG9-211ENST00000601170 A0A0D9SFI3 127 aa17.31■□□□□ 0.36
SMG9-211ENST00000601170 GCKRQ14397 625 aa17.31■□□□□ 0.36
SMG9-211ENST00000601170 ME3Q16798 604 aa17.31■□□□□ 0.36
SMG9-211ENST00000601170 COPS6Q7L5N1 327 aa17.31■□□□□ 0.36
SMG9-211ENST00000601170 NFATC2IPQ8NCF5 419 aa17.31■□□□□ 0.36
SMG9-211ENST00000601170 MYD88Q99836 296 aa17.31■□□□□ 0.36
SMG9-211ENST00000601170 NLRP2Q9NX02 1062 aa17.31■□□□□ 0.36
SMG9-211ENST00000601170 CCDC39Q9UFE4 941 aa17.31■□□□□ 0.36
SMG9-211ENST00000601170 MTMR6Q9Y217 621 aa17.31■□□□□ 0.36
SMG9-211ENST00000601170 MRC1P22897 1456 aa17.31■□□□□ 0.36
SMG9-211ENST00000601170 ZNF500O60304 480 aaPredicted RBP17.31■□□□□ 0.36
SMG9-211ENST00000601170 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.31■□□□□ 0.36
SMG9-211ENST00000601170 SNRKQ9NRH2 765 aa17.31■□□□□ 0.36
SMG9-211ENST00000601170 ADAMTSL3P82987 1691 aa17.31■□□□□ 0.36
SMG9-211ENST00000601170 SLC27A2O14975 620 aa17.3■□□□□ 0.36
SMG9-211ENST00000601170 PHKG2P15735 406 aa17.3■□□□□ 0.36
SMG9-211ENST00000601170 EPHA10Q5JZY3 1008 aa17.3■□□□□ 0.36
SMG9-211ENST00000601170 PROSER2Q86WR7 435 aaPredicted RBP17.3■□□□□ 0.36
SMG9-211ENST00000601170 NECAB1Q8N987 351 aa17.3■□□□□ 0.36
SMG9-211ENST00000601170 METTL22Q9BUU2 404 aaPredicted RBP17.3■□□□□ 0.36
SMG9-211ENST00000601170 TPCN1Q9ULQ1 816 aa17.3■□□□□ 0.36
SMG9-211ENST00000601170 MST1RQ04912 1400 aa17.3■□□□□ 0.36
SMG9-211ENST00000601170 MEGF6O75095 1541 aa17.29■□□□□ 0.36
SMG9-211ENST00000601170 TATP17735 454 aaPredicted RBP17.29■□□□□ 0.36
SMG9-211ENST00000601170 ZNF496Q96IT1 587 aaPredicted RBP17.29■□□□□ 0.36
SMG9-211ENST00000601170 MED23Q9ULK4 1368 aa17.29■□□□□ 0.36
SMG9-211ENST00000601170 TPM2P07951 284 aa17.29■□□□□ 0.36
SMG9-211ENST00000601170 DNM1Q05193 864 aaKnown RBP17.29■□□□□ 0.36
SMG9-211ENST00000601170 COL9A3Q14050 684 aaPredicted RBP17.29■□□□□ 0.36
SMG9-211ENST00000601170 FAM184AQ8NB25 1140 aa17.29■□□□□ 0.36
SMG9-211ENST00000601170 AFDNP55196 1824 aaKnown RBP17.28■□□□□ 0.36
SMG9-211ENST00000601170 VPS37CA5D8V6 355 aaPredicted RBP17.28■□□□□ 0.36
SMG9-211ENST00000601170 PSMA5P28066 241 aa17.28■□□□□ 0.36
SMG9-211ENST00000601170 MCM5P33992 734 aa17.28■□□□□ 0.36
SMG9-211ENST00000601170 LETM1O95202 739 aaPredicted RBP17.27■□□□□ 0.36
SMG9-211ENST00000601170 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.36
SMG9-211ENST00000601170 CSPP1Q1MSJ5 1256 aa17.27■□□□□ 0.36
SMG9-211ENST00000601170 RNF20Q5VTR2 975 aa17.27■□□□□ 0.36
SMG9-211ENST00000601170 ANKRD13DQ6ZTN6 518 aa17.27■□□□□ 0.36
SMG9-211ENST00000601170 IFNL2Q8IZJ0 200 aa17.27■□□□□ 0.36
SMG9-211ENST00000601170 USP16Q9Y5T5 823 aa17.27■□□□□ 0.36
SMG9-211ENST00000601170 BLOC1S2Q6QNY1 142 aa17.26■□□□□ 0.35
SMG9-211ENST00000601170 LRP10Q7Z4F1 713 aa17.26■□□□□ 0.35
SMG9-211ENST00000601170 ZNF589Q86UQ0 364 aaPredicted RBP17.26■□□□□ 0.35
SMG9-211ENST00000601170 JARID2Q92833 1246 aaPredicted RBP17.26■□□□□ 0.35
SMG9-211ENST00000601170 UVSSAQ2YD98 709 aa17.26■□□□□ 0.35
SMG9-211ENST00000601170 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
SMG9-211ENST00000601170 EDC3Q96F86 508 aaKnown RBP17.26■□□□□ 0.35
SMG9-211ENST00000601170 TCEANC2Q96MN5 208 aa17.26■□□□□ 0.35
SMG9-211ENST00000601170 C19orf44Q9H6X5 657 aa17.26■□□□□ 0.35
SMG9-211ENST00000601170 COPRSQ9NQ92 184 aa17.26■□□□□ 0.35
SMG9-211ENST00000601170 TAF6LQ9Y6J9 622 aa17.26■□□□□ 0.35
SMG9-211ENST00000601170 PTMAP06454 111 aaKnown RBP17.25■□□□□ 0.35
SMG9-211ENST00000601170 JCADQ9P266 1359 aa17.25■□□□□ 0.35
SMG9-211ENST00000601170 SNRPA1P09661 255 aaKnown RBP17.25■□□□□ 0.35
SMG9-211ENST00000601170 CSB-PGBD3P0DP91 1061 aa17.25■□□□□ 0.35
SMG9-211ENST00000601170 HCLS1P14317 486 aaPredicted RBP17.25■□□□□ 0.35
SMG9-211ENST00000601170 COL18A1P39060 1754 aa17.25■□□□□ 0.35
SMG9-211ENST00000601170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMG9-211ENST00000601170 DBNLQ9UJU6 430 aaKnown RBP17.25■□□□□ 0.35
SMG9-211ENST00000601170 ARFGEF2Q9Y6D5 1785 aa17.25■□□□□ 0.35
SMG9-211ENST00000601170 RPS6KB1P23443 525 aa17.24■□□□□ 0.35
SMG9-211ENST00000601170 RFX5P48382 616 aaPredicted RBP17.24■□□□□ 0.35
SMG9-211ENST00000601170 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
SMG9-211ENST00000601170 LARP1BQ659C4 914 aaKnown RBP17.24■□□□□ 0.35
SMG9-211ENST00000601170 DDX17Q92841 729 aaKnown RBP17.24■□□□□ 0.35
SMG9-211ENST00000601170 ANKRD1Q15327 319 aa17.24■□□□□ 0.35
SMG9-211ENST00000601170 TNNI3KQ59H18 835 aa17.24■□□□□ 0.35
SMG9-211ENST00000601170 USP25Q9UHP3 1055 aa17.24■□□□□ 0.35
SMG9-211ENST00000601170 FPGT-TNNI3KV9GXZ4 949 aa17.24■□□□□ 0.35
SMG9-211ENST00000601170 TFCP2Q12800 502 aa17.23■□□□□ 0.35
SMG9-211ENST00000601170 UBE3BQ7Z3V4 1068 aa17.23■□□□□ 0.35
SMG9-211ENST00000601170 DCAF5Q96JK2 942 aa17.23■□□□□ 0.35
SMG9-211ENST00000601170 HMG20BQ9P0W2 317 aa17.23■□□□□ 0.35
SMG9-211ENST00000601170 ABCC6O95255 1503 aa17.23■□□□□ 0.35
SMG9-211ENST00000601170 CYP27B1O15528 508 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms