RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ZBTB38Q8NAP3 1195 aaPredicted RBP21.82■■□□□ 1.08
SHKBP1-224ENST00000600718 CAMTA2O94983 1202 aa21.81■■□□□ 1.08
SHKBP1-224ENST00000600718 ZNF34Q8IZ26 560 aa21.81■■□□□ 1.08
SHKBP1-224ENST00000600718 MYH14Q7Z406 1995 aaKnown RBP21.81■■□□□ 1.08
SHKBP1-224ENST00000600718 ERC1Q8IUD2 1116 aa21.81■■□□□ 1.08
SHKBP1-224ENST00000600718 RHPN1Q8TCX5 695 aa21.81■■□□□ 1.08
SHKBP1-224ENST00000600718 LY75O60449 1722 aa21.8■■□□□ 1.08
SHKBP1-224ENST00000600718 RPS6KA4O75676 772 aa21.8■■□□□ 1.08
SHKBP1-224ENST00000600718 GPTP24298 496 aa21.8■■□□□ 1.08
SHKBP1-224ENST00000600718 BMP2KLQ5H9B9 411 aa21.8■■□□□ 1.08
SHKBP1-224ENST00000600718 OS9Q13438 667 aaPredicted RBP21.79■■□□□ 1.08
SHKBP1-224ENST00000600718 RGL2O15211 777 aa21.79■■□□□ 1.08
SHKBP1-224ENST00000600718 G3BP1Q13283 466 aaKnown RBP eCLIP21.79■■□□□ 1.08
SHKBP1-224ENST00000600718 RTL5Q5HYW3 569 aaPredicted RBP21.79■■□□□ 1.08
SHKBP1-224ENST00000600718 LMBR1LQ6UX01 489 aa21.79■■□□□ 1.08
SHKBP1-224ENST00000600718 PA2G4Q9UQ80 394 aaKnown RBP21.79■■□□□ 1.08
SHKBP1-224ENST00000600718 TRIM37O94972 964 aa21.78■■□□□ 1.08
SHKBP1-224ENST00000600718 PLA2G12BQ9BX93 195 aa21.78■■□□□ 1.08
SHKBP1-224ENST00000600718 COPRSQ9NQ92 184 aa21.78■■□□□ 1.08
SHKBP1-224ENST00000600718 ZNF652Q9Y2D9 606 aa21.78■■□□□ 1.08
SHKBP1-224ENST00000600718 CDHR2Q9BYE9 1310 aa21.78■■□□□ 1.08
SHKBP1-224ENST00000600718 RFX5P48382 616 aaPredicted RBP21.78■■□□□ 1.08
SHKBP1-224ENST00000600718 CLEC4GQ6UXB4 293 aa21.78■■□□□ 1.08
SHKBP1-224ENST00000600718 OTUD7AQ8TE49 926 aaPredicted RBP21.78■■□□□ 1.08
SHKBP1-224ENST00000600718 FAM89AQ96GI7 184 aa21.78■■□□□ 1.08
SHKBP1-224ENST00000600718 OSBPL3Q9H4L5 887 aa21.78■■□□□ 1.08
SHKBP1-224ENST00000600718 ANKRD36CQ5JPF3 1778 aa21.77■■□□□ 1.08
SHKBP1-224ENST00000600718 NUP98P52948 1817 aa21.77■■□□□ 1.08
SHKBP1-224ENST00000600718 HMGB2P26583 209 aaKnown RBP21.76■■□□□ 1.07
SHKBP1-224ENST00000600718 PARP10Q53GL7 1025 aa21.76■■□□□ 1.07
SHKBP1-224ENST00000600718 SLC27A3Q5K4L6 730 aa21.76■■□□□ 1.07
SHKBP1-224ENST00000600718 RGS17Q9UGC6 210 aaPredicted RBP21.76■■□□□ 1.07
SHKBP1-224ENST00000600718 TTC22Q5TAA0 569 aa21.76■■□□□ 1.07
SHKBP1-224ENST00000600718 IL1RAPL2Q9NP60 686 aa21.76■■□□□ 1.07
SHKBP1-224ENST00000600718 TRMT112Q9UI30 125 aaKnown RBP21.76■■□□□ 1.07
SHKBP1-224ENST00000600718 RTCBQ9Y3I0 505 aaKnown RBP21.76■■□□□ 1.07
SHKBP1-224ENST00000600718 SALL3Q9BXA9 1300 aa21.75■■□□□ 1.07
SHKBP1-224ENST00000600718 GNPATO15228 680 aa21.75■■□□□ 1.07
SHKBP1-224ENST00000600718 PDE1AP54750 535 aa21.75■■□□□ 1.07
SHKBP1-224ENST00000600718 PTPN12Q05209 780 aaKnown RBP21.75■■□□□ 1.07
SHKBP1-224ENST00000600718 UBN2Q6ZU65 1347 aa21.75■■□□□ 1.07
SHKBP1-224ENST00000600718 MSH5O43196 834 aa21.74■■□□□ 1.07
SHKBP1-224ENST00000600718 STAP2Q9UGK3 403 aa21.74■■□□□ 1.07
SHKBP1-224ENST00000600718 CLASRPQ8N2M8 674 aaKnown RBP21.74■■□□□ 1.07
SHKBP1-224ENST00000600718 CHMP3Q9Y3E7 222 aa21.74■■□□□ 1.07
SHKBP1-224ENST00000600718 MX1P20591 662 aa21.73■■□□□ 1.07
SHKBP1-224ENST00000600718 LRRC4BQ9NT99 713 aa21.73■■□□□ 1.07
SHKBP1-224ENST00000600718 NARFQ9UHQ1 456 aa21.73■■□□□ 1.07
SHKBP1-224ENST00000600718 CSF1RP07333 972 aa21.72■■□□□ 1.07
SHKBP1-224ENST00000600718 AOX1Q06278 1338 aa21.72■■□□□ 1.07
SHKBP1-224ENST00000600718 SASH1O94885 1247 aa21.72■■□□□ 1.07
SHKBP1-224ENST00000600718 GSPT1P15170 499 aaKnown RBP21.72■■□□□ 1.07
SHKBP1-224ENST00000600718 SUSD4Q5VX71 490 aa21.72■■□□□ 1.07
SHKBP1-224ENST00000600718 POTEAQ6S8J7 498 aa21.72■■□□□ 1.07
SHKBP1-224ENST00000600718 KLHDC4Q8TBB5 520 aa21.72■■□□□ 1.07
SHKBP1-224ENST00000600718 AK7Q96M32 723 aa21.72■■□□□ 1.07
SHKBP1-224ENST00000600718 UTP14AQ9BVJ6 771 aaKnown RBP21.72■■□□□ 1.07
SHKBP1-224ENST00000600718 SIL1Q9H173 461 aa21.72■■□□□ 1.07
SHKBP1-224ENST00000600718 NIP7Q9Y221 180 aaKnown RBP eCLIP21.72■■□□□ 1.07
SHKBP1-224ENST00000600718 TAF1LQ8IZX4 1826 aa21.71■■□□□ 1.07
SHKBP1-224ENST00000600718 IRS4O14654 1257 aaPredicted RBP21.71■■□□□ 1.07
SHKBP1-224ENST00000600718 SYNE4Q8N205 404 aa21.7■■□□□ 1.07
SHKBP1-224ENST00000600718 PDE8AO60658 829 aa21.7■■□□□ 1.06
SHKBP1-224ENST00000600718 ZPR1O75312 459 aa21.7■■□□□ 1.06
SHKBP1-224ENST00000600718 BCORQ6W2J9 1755 aa21.7■■□□□ 1.06
SHKBP1-224ENST00000600718 C4BP0C0L5 1744 aa21.7■■□□□ 1.06
SHKBP1-224ENST00000600718 SH3TC1Q8TE82 1336 aa21.69■■□□□ 1.06
SHKBP1-224ENST00000600718 HSP90B1P14625 803 aaKnown RBP21.69■■□□□ 1.06
SHKBP1-224ENST00000600718 CCDC57Q2TAC2 916 aa21.69■■□□□ 1.06
SHKBP1-224ENST00000600718 NUTM1Q86Y26 1132 aa21.69■■□□□ 1.06
SHKBP1-224ENST00000600718 PLSCR1O15162 318 aa21.68■■□□□ 1.06
SHKBP1-224ENST00000600718 TRAPPC3LQ5T215 181 aa21.68■■□□□ 1.06
SHKBP1-224ENST00000600718 ARHGEF1Q92888 912 aaKnown RBP21.68■■□□□ 1.06
SHKBP1-224ENST00000600718 ADRA2BP18089 450 aa21.68■■□□□ 1.06
SHKBP1-224ENST00000600718 CTSWP56202 376 aa21.68■■□□□ 1.06
SHKBP1-224ENST00000600718 IFIT2P09913 472 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-224ENST00000600718 USPL1Q5W0Q7 1092 aa21.67■■□□□ 1.06
SHKBP1-224ENST00000600718 TTLL11Q8NHH1 800 aa21.67■■□□□ 1.06
SHKBP1-224ENST00000600718 BCL2L12Q9HB09 334 aa21.67■■□□□ 1.06
SHKBP1-224ENST00000600718 FBXO3Q9UK99 471 aa21.67■■□□□ 1.06
SHKBP1-224ENST00000600718 USP42Q9H9J4 1324 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-224ENST00000600718 NTSR2O95665 410 aa21.67■■□□□ 1.06
SHKBP1-224ENST00000600718 TXNRD1Q16881 649 aa21.67■■□□□ 1.06
SHKBP1-224ENST00000600718 SMIM5Q71RC9 77 aa21.67■■□□□ 1.06
SHKBP1-224ENST00000600718 CIAO1O76071 339 aa21.66■■□□□ 1.06
SHKBP1-224ENST00000600718 SEC24BO95487 1268 aa21.66■■□□□ 1.06
SHKBP1-224ENST00000600718 SDSP20132 328 aa21.66■■□□□ 1.06
SHKBP1-224ENST00000600718 RFC4P35249 363 aa21.66■■□□□ 1.06
SHKBP1-224ENST00000600718 IFIT5Q13325 482 aaKnown RBP21.66■■□□□ 1.06
SHKBP1-224ENST00000600718 TTC41PQ6P2S7 1318 aa21.66■■□□□ 1.06
SHKBP1-224ENST00000600718 CDC45O75419 566 aa21.65■■□□□ 1.06
SHKBP1-224ENST00000600718 APBA3O96018 575 aa21.65■■□□□ 1.06
SHKBP1-224ENST00000600718 IL15P40933 162 aaPredicted RBP21.65■■□□□ 1.06
SHKBP1-224ENST00000600718 AACSQ86V21 672 aa21.65■■□□□ 1.06
SHKBP1-224ENST00000600718 SRP68Q9UHB9 627 aaKnown RBP21.65■■□□□ 1.06
SHKBP1-224ENST00000600718 SCN7AQ01118 1682 aa21.65■■□□□ 1.06
SHKBP1-224ENST00000600718 FAM177BA6PVY3 158 aa21.65■■□□□ 1.06
SHKBP1-224ENST00000600718 EYA2O00167 538 aa21.65■■□□□ 1.06
SHKBP1-224ENST00000600718 AMIGO3Q86WK7 504 aa21.65■■□□□ 1.06
SHKBP1-224ENST00000600718 PROM2Q8N271 834 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms