RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 SCN7AQ01118 1682 aa29.04■■■□□ 2.24
SYMPK-212ENST00000598896 SLC27A3Q5K4L6 730 aa29.04■■■□□ 2.24
SYMPK-212ENST00000598896 PROM2Q8N271 834 aa29.04■■■□□ 2.24
SYMPK-212ENST00000598896 ZNF34Q8IZ26 560 aa29.04■■■□□ 2.24
SYMPK-212ENST00000598896 APBB1O00213 710 aa29.02■■■□□ 2.24
SYMPK-212ENST00000598896 C4AP0C0L4 1744 aa29.02■■■□□ 2.24
SYMPK-212ENST00000598896 TXNRD1Q16881 649 aa29.02■■■□□ 2.24
SYMPK-212ENST00000598896 RABL6Q3YEC7 729 aaPredicted RBP29.02■■■□□ 2.24
SYMPK-212ENST00000598896 RTCBQ9Y3I0 505 aaKnown RBP29.02■■■□□ 2.24
SYMPK-212ENST00000598896 APBA3O96018 575 aa29.01■■■□□ 2.23
SYMPK-212ENST00000598896 UBR3Q6ZT12 1888 aa29■■■□□ 2.23
SYMPK-212ENST00000598896 PLSCR1O15162 318 aa29■■■□□ 2.23
SYMPK-212ENST00000598896 PCCAP05165 728 aaPredicted RBP29■■■□□ 2.23
SYMPK-212ENST00000598896 FOXO4P98177 505 aa29■■■□□ 2.23
SYMPK-212ENST00000598896 ZBTB38Q8NAP3 1195 aaPredicted RBP29■■■□□ 2.23
SYMPK-212ENST00000598896 FAM89AQ96GI7 184 aa29■■■□□ 2.23
SYMPK-212ENST00000598896 AK7Q96M32 723 aa28.99■■■□□ 2.23
SYMPK-212ENST00000598896 SMARCA5O60264 1052 aaPredicted RBP28.98■■■□□ 2.23
SYMPK-212ENST00000598896 SURF6O75683 361 aaKnown RBP28.97■■■□□ 2.23
SYMPK-212ENST00000598896 SYNE4Q8N205 404 aa28.97■■■□□ 2.23
SYMPK-212ENST00000598896 ARHGEF1Q92888 912 aaKnown RBP28.96■■■□□ 2.23
SYMPK-212ENST00000598896 BCL2L12Q9HB09 334 aa28.96■■■□□ 2.23
SYMPK-212ENST00000598896 SRP68Q9UHB9 627 aaKnown RBP28.96■■■□□ 2.23
SYMPK-212ENST00000598896 NARFQ9UHQ1 456 aa28.96■■■□□ 2.23
SYMPK-212ENST00000598896 PA2G4Q9UQ80 394 aaKnown RBP28.96■■■□□ 2.23
SYMPK-212ENST00000598896 ZNF652Q9Y2D9 606 aa28.96■■■□□ 2.23
SYMPK-212ENST00000598896 CLEC4GQ6UXB4 293 aa28.95■■■□□ 2.23
SYMPK-212ENST00000598896 PHF14O94880 888 aa28.95■■■□□ 2.22
SYMPK-212ENST00000598896 USPL1Q5W0Q7 1092 aa28.95■■■□□ 2.22
SYMPK-212ENST00000598896 LMBR1LQ6UX01 489 aa28.95■■■□□ 2.22
SYMPK-212ENST00000598896 NIP7Q9Y221 180 aaKnown RBP eCLIP28.95■■■□□ 2.22
SYMPK-212ENST00000598896 NOP58Q9Y2X3 529 aaKnown RBP28.95■■■□□ 2.22
SYMPK-212ENST00000598896 SUSD4Q5VX71 490 aa28.94■■■□□ 2.22
SYMPK-212ENST00000598896 BCL11AQ9H165 835 aa28.94■■■□□ 2.22
SYMPK-212ENST00000598896 TRMT112Q9UI30 125 aaKnown RBP28.94■■■□□ 2.22
SYMPK-212ENST00000598896 RGPD3A6NKT7 1758 aaPredicted RBP28.94■■■□□ 2.22
SYMPK-212ENST00000598896 RGPD4Q7Z3J3 1758 aa28.94■■■□□ 2.22
SYMPK-212ENST00000598896 CDHR2Q9BYE9 1310 aa28.93■■■□□ 2.22
SYMPK-212ENST00000598896 ILDR1Q86SU0 546 aaPredicted RBP28.93■■■□□ 2.22
SYMPK-212ENST00000598896 RFX5P48382 616 aaPredicted RBP28.93■■■□□ 2.22
SYMPK-212ENST00000598896 C16orf71Q8IYS4 520 aaPredicted RBP28.93■■■□□ 2.22
SYMPK-212ENST00000598896 KLHDC4Q8TBB5 520 aa28.93■■■□□ 2.22
SYMPK-212ENST00000598896 LRRCC1Q9C099 1032 aa28.93■■■□□ 2.22
SYMPK-212ENST00000598896 RGL2O15211 777 aa28.92■■■□□ 2.22
SYMPK-212ENST00000598896 TRAPPC3LQ5T215 181 aa28.91■■■□□ 2.22
SYMPK-212ENST00000598896 PLA2G12BQ9BX93 195 aa28.91■■■□□ 2.22
SYMPK-212ENST00000598896 USP42Q9H9J4 1324 aaKnown RBP28.91■■■□□ 2.22
SYMPK-212ENST00000598896 PARP10Q53GL7 1025 aa28.91■■■□□ 2.22
SYMPK-212ENST00000598896 OTUD7AQ8TE49 926 aaPredicted RBP28.91■■■□□ 2.22
SYMPK-212ENST00000598896 TSHZ2Q9NRE2 1034 aa28.91■■■□□ 2.22
SYMPK-212ENST00000598896 ZBTB47Q9UFB7 747 aaPredicted RBP28.91■■■□□ 2.22
SYMPK-212ENST00000598896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.9■■■□□ 2.22
SYMPK-212ENST00000598896 ZPR1O75312 459 aa28.9■■■□□ 2.22
SYMPK-212ENST00000598896 FAM177BA6PVY3 158 aa28.89■■■□□ 2.22
SYMPK-212ENST00000598896 RAB11FIP3O75154 756 aa28.89■■■□□ 2.22
SYMPK-212ENST00000598896 TBC1D9BQ66K14 1250 aa28.89■■■□□ 2.22
SYMPK-212ENST00000598896 MYH3P11055 1940 aa28.89■■■□□ 2.22
SYMPK-212ENST00000598896 NTSR2O95665 410 aa28.89■■■□□ 2.21
SYMPK-212ENST00000598896 ADRA2BP18089 450 aa28.89■■■□□ 2.21
SYMPK-212ENST00000598896 RFC4P35249 363 aa28.89■■■□□ 2.21
SYMPK-212ENST00000598896 CHMP3Q9Y3E7 222 aa28.89■■■□□ 2.21
SYMPK-212ENST00000598896 IRS4O14654 1257 aaPredicted RBP28.88■■■□□ 2.21
SYMPK-212ENST00000598896 PTPN12Q05209 780 aaKnown RBP28.88■■■□□ 2.21
SYMPK-212ENST00000598896 RHPN1Q8TCX5 695 aa28.88■■■□□ 2.21
SYMPK-212ENST00000598896 UTP14AQ9BVJ6 771 aaKnown RBP28.88■■■□□ 2.21
SYMPK-212ENST00000598896 HSP90AB4PQ58FF6 505 aa28.87■■■□□ 2.21
SYMPK-212ENST00000598896 COPRSQ9NQ92 184 aa28.87■■■□□ 2.21
SYMPK-212ENST00000598896 COL24A1Q17RW2 1714 aa28.87■■■□□ 2.21
SYMPK-212ENST00000598896 DDX60Q8IY21 1712 aaKnown RBP28.87■■■□□ 2.21
SYMPK-212ENST00000598896 SH3TC1Q8TE82 1336 aa28.87■■■□□ 2.21
SYMPK-212ENST00000598896 PLEKHM2Q8IWE5 1019 aa28.87■■■□□ 2.21
SYMPK-212ENST00000598896 SIL1Q9H173 461 aa28.87■■■□□ 2.21
SYMPK-212ENST00000598896 IL1RAPL2Q9NP60 686 aa28.87■■■□□ 2.21
SYMPK-212ENST00000598896 ZNF827Q17R98 1081 aa28.86■■■□□ 2.21
SYMPK-212ENST00000598896 BICDL1Q6ZP65 573 aa28.86■■■□□ 2.21
SYMPK-212ENST00000598896 KIF1BPQ96EK5 621 aa28.86■■■□□ 2.21
SYMPK-212ENST00000598896 CSF1RP07333 972 aa28.85■■■□□ 2.21
SYMPK-212ENST00000598896 SSFA2P28290 1259 aa28.85■■■□□ 2.21
SYMPK-212ENST00000598896 OS9Q13438 667 aaPredicted RBP28.85■■■□□ 2.21
SYMPK-212ENST00000598896 LAMB2P55268 1798 aa28.85■■■□□ 2.21
SYMPK-212ENST00000598896 TUBGCP6Q96RT7 1819 aa28.85■■■□□ 2.21
SYMPK-212ENST00000598896 FAM161AQ3B820 660 aa28.84■■■□□ 2.21
SYMPK-212ENST00000598896 NUTM1Q86Y26 1132 aa28.84■■■□□ 2.21
SYMPK-212ENST00000598896 SASH1O94885 1247 aa28.83■■■□□ 2.21
SYMPK-212ENST00000598896 CTSWP56202 376 aa28.83■■■□□ 2.21
SYMPK-212ENST00000598896 AKT1S1Q96B36 256 aa28.83■■■□□ 2.21
SYMPK-212ENST00000598896 CCDC85AQ96PX6 553 aaPredicted RBP28.83■■■□□ 2.21
SYMPK-212ENST00000598896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.83■■■□□ 2.21
SYMPK-212ENST00000598896 SALL3Q9BXA9 1300 aa28.83■■■□□ 2.21
SYMPK-212ENST00000598896 PDE8AO60658 829 aa28.83■■■□□ 2.2
SYMPK-212ENST00000598896 TTLL11Q8NHH1 800 aa28.83■■■□□ 2.2
SYMPK-212ENST00000598896 HCLS1P14317 486 aaPredicted RBP28.82■■■□□ 2.2
SYMPK-212ENST00000598896 G3BP1Q13283 466 aaKnown RBP eCLIP28.82■■■□□ 2.2
SYMPK-212ENST00000598896 C8orf34Q49A92 452 aa28.82■■■□□ 2.2
SYMPK-212ENST00000598896 HMGB2P26583 209 aaKnown RBP28.81■■■□□ 2.2
SYMPK-212ENST00000598896 ERC1Q8IUD2 1116 aa28.81■■■□□ 2.2
SYMPK-212ENST00000598896 EN1Q05925 392 aaPredicted RBP28.8■■■□□ 2.2
SYMPK-212ENST00000598896 ZNF594Q96JF6 807 aaPredicted RBP28.8■■■□□ 2.2
SYMPK-212ENST00000598896 CAMKK2Q96RR4 588 aa28.8■■■□□ 2.2
SYMPK-212ENST00000598896 SETDB2Q96T68 719 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms