RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 COPRSQ9NQ92 184 aa14.61□□□□□ -0.07
NPC1-214ENST00000593280 MAP3K15Q6ZN16 1313 aa14.61□□□□□ -0.07
NPC1-214ENST00000593280 THSD7AQ9UPZ6 1657 aa14.61□□□□□ -0.07
NPC1-214ENST00000593280 SASH1O94885 1247 aa14.6□□□□□ -0.07
NPC1-214ENST00000593280 RFX5P48382 616 aaPredicted RBP14.6□□□□□ -0.07
NPC1-214ENST00000593280 AACSQ86V21 672 aa14.6□□□□□ -0.07
NPC1-214ENST00000593280 FNBP4Q8N3X1 1017 aaPredicted RBP14.6□□□□□ -0.07
NPC1-214ENST00000593280 KLHDC4Q8TBB5 520 aa14.6□□□□□ -0.07
NPC1-214ENST00000593280 ZBTB1Q9Y2K1 713 aa14.6□□□□□ -0.07
NPC1-214ENST00000593280 NUP98P52948 1817 aa14.6□□□□□ -0.07
NPC1-214ENST00000593280 ZNF831Q5JPB2 1677 aa14.6□□□□□ -0.07
NPC1-214ENST00000593280 GLRX3O76003 335 aaKnown RBP14.59□□□□□ -0.07
NPC1-214ENST00000593280 FOXO4P98177 505 aa14.59□□□□□ -0.07
NPC1-214ENST00000593280 TRIM28Q13263 835 aaKnown RBP14.59□□□□□ -0.07
NPC1-214ENST00000593280 ARXQ96QS3 562 aa14.59□□□□□ -0.07
NPC1-214ENST00000593280 ECHDC1Q9NTX5 307 aa14.59□□□□□ -0.07
NPC1-214ENST00000593280 CHMLP26374 656 aa14.59□□□□□ -0.07
NPC1-214ENST00000593280 PTPN12Q05209 780 aaKnown RBP14.59□□□□□ -0.07
NPC1-214ENST00000593280 HSP90AB3PQ58FF7 597 aa14.59□□□□□ -0.07
NPC1-214ENST00000593280 LMBR1LQ6UX01 489 aa14.59□□□□□ -0.07
NPC1-214ENST00000593280 HSCBQ8IWL3 235 aa14.59□□□□□ -0.07
NPC1-214ENST00000593280 CNTROBQ8N137 903 aa14.59□□□□□ -0.07
NPC1-214ENST00000593280 USP26Q9BXU7 913 aa14.59□□□□□ -0.07
NPC1-214ENST00000593280 USP21Q9UK80 565 aa14.59□□□□□ -0.07
NPC1-214ENST00000593280 CHMP3Q9Y3E7 222 aa14.59□□□□□ -0.07
NPC1-214ENST00000593280 COL5A3P25940 1745 aaPredicted RBP14.59□□□□□ -0.07
NPC1-214ENST00000593280 PALLDQ8WX93 1383 aa14.58□□□□□ -0.08
NPC1-214ENST00000593280 IL6STP40189 918 aaPredicted RBP14.58□□□□□ -0.08
NPC1-214ENST00000593280 RTL5Q5HYW3 569 aaPredicted RBP14.58□□□□□ -0.08
NPC1-214ENST00000593280 GIGYF2Q6Y7W6 1299 aaKnown RBP14.58□□□□□ -0.08
NPC1-214ENST00000593280 SMARCC1Q92922 1105 aaPredicted RBP14.58□□□□□ -0.08
NPC1-214ENST00000593280 KIF2CQ99661 725 aa14.58□□□□□ -0.08
NPC1-214ENST00000593280 ESYT1Q9BSJ8 1104 aa14.58□□□□□ -0.08
NPC1-214ENST00000593280 LOC102724428A0A0B4J2F2 783 aa14.57□□□□□ -0.08
NPC1-214ENST00000593280 ATP6V1AP38606 617 aa14.57□□□□□ -0.08
NPC1-214ENST00000593280 SIK1P57059 783 aa14.57□□□□□ -0.08
NPC1-214ENST00000593280 MYT1Q01538 1121 aa14.57□□□□□ -0.08
NPC1-214ENST00000593280 CCDC87Q9NVE4 849 aa14.57□□□□□ -0.08
NPC1-214ENST00000593280 MAP4K4O95819 1239 aaPredicted RBP14.56□□□□□ -0.08
NPC1-214ENST00000593280 PCCAP05165 728 aaPredicted RBP14.56□□□□□ -0.08
NPC1-214ENST00000593280 MEX3CQ5U5Q3 659 aaKnown RBP14.56□□□□□ -0.08
NPC1-214ENST00000593280 SNX21Q969T3 373 aa14.56□□□□□ -0.08
NPC1-214ENST00000593280 EAF2Q96CJ1 260 aaPredicted RBP14.56□□□□□ -0.08
NPC1-214ENST00000593280 NHSQ6T4R5 1651 aa14.56□□□□□ -0.08
NPC1-214ENST00000593280 MYH3P11055 1940 aa14.56□□□□□ -0.08
NPC1-214ENST00000593280 ERVV-1B6SEH8 477 aa14.55□□□□□ -0.08
NPC1-214ENST00000593280 HLFQ16534 295 aa14.55□□□□□ -0.08
NPC1-214ENST00000593280 DZIP3Q86Y13 1208 aaKnown RBP14.55□□□□□ -0.08
NPC1-214ENST00000593280 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.55□□□□□ -0.08
NPC1-214ENST00000593280 CRKLP46109 303 aaKnown RBP14.55□□□□□ -0.08
NPC1-214ENST00000593280 ZBTB38Q8NAP3 1195 aaPredicted RBP14.55□□□□□ -0.08
NPC1-214ENST00000593280 CCDC8Q9H0W5 538 aaPredicted RBP14.55□□□□□ -0.08
NPC1-214ENST00000593280 BTAF1O14981 1849 aa14.54□□□□□ -0.08
NPC1-214ENST00000593280 KCNQ2O43526 872 aa14.54□□□□□ -0.08
NPC1-214ENST00000593280 TFCP2Q12800 502 aa14.54□□□□□ -0.08
NPC1-214ENST00000593280 NBR1Q14596 966 aa14.54□□□□□ -0.08
NPC1-214ENST00000593280 RABEP1Q15276 862 aa14.54□□□□□ -0.08
NPC1-214ENST00000593280 INTS5Q6P9B9 1019 aaKnown RBP14.54□□□□□ -0.08
NPC1-214ENST00000593280 NLRP10Q86W26 655 aa14.54□□□□□ -0.08
NPC1-214ENST00000593280 TLR7Q9NYK1 1049 aaKnown RBP14.54□□□□□ -0.08
NPC1-214ENST00000593280 BCORQ6W2J9 1755 aa14.54□□□□□ -0.08
NPC1-214ENST00000593280 CDHR2Q9BYE9 1310 aa14.53□□□□□ -0.08
NPC1-214ENST00000593280 GPTP24298 496 aa14.53□□□□□ -0.08
NPC1-214ENST00000593280 EIF5P55010 431 aaKnown RBP14.53□□□□□ -0.08
NPC1-214ENST00000593280 ITPK1Q13572 414 aa14.53□□□□□ -0.08
NPC1-214ENST00000593280 TNNI3KQ59H18 835 aa14.53□□□□□ -0.08
NPC1-214ENST00000593280 PLA2G12BQ9BX93 195 aa14.53□□□□□ -0.08
NPC1-214ENST00000593280 RGS17Q9UGC6 210 aaPredicted RBP14.53□□□□□ -0.08
NPC1-214ENST00000593280 FPGT-TNNI3KV9GXZ4 949 aa14.53□□□□□ -0.08
NPC1-214ENST00000593280 MYH14Q7Z406 1995 aaKnown RBP14.53□□□□□ -0.08
NPC1-214ENST00000593280 MCCP23508 829 aa14.52□□□□□ -0.08
NPC1-214ENST00000593280 FAM89AQ96GI7 184 aa14.52□□□□□ -0.08
NPC1-214ENST00000593280 ANO2Q9NQ90 1003 aa14.52□□□□□ -0.08
NPC1-214ENST00000593280 TBC1D2BQ9UPU7 963 aa14.52□□□□□ -0.08
NPC1-214ENST00000593280 IL15P40933 162 aaPredicted RBP14.52□□□□□ -0.09
NPC1-214ENST00000593280 EVI5LQ96CN4 794 aa14.52□□□□□ -0.09
NPC1-214ENST00000593280 SLKQ9H2G2 1235 aaPredicted RBP14.52□□□□□ -0.09
NPC1-214ENST00000593280 CIAO1O76071 339 aa14.51□□□□□ -0.09
NPC1-214ENST00000593280 CCDC57Q2TAC2 916 aa14.51□□□□□ -0.09
NPC1-214ENST00000593280 ATG9AQ7Z3C6 839 aa14.51□□□□□ -0.09
NPC1-214ENST00000593280 DIAPH3Q9NSV4 1193 aa14.51□□□□□ -0.09
NPC1-214ENST00000593280 ZNF609O15014 1411 aa14.5□□□□□ -0.09
NPC1-214ENST00000593280 AFF2P51816 1311 aa14.5□□□□□ -0.09
NPC1-214ENST00000593280 EYA2O00167 538 aa14.5□□□□□ -0.09
NPC1-214ENST00000593280 EPB41L2O43491 1005 aaKnown RBP14.5□□□□□ -0.09
NPC1-214ENST00000593280 RUFY2Q8WXA3 655 aa14.5□□□□□ -0.09
NPC1-214ENST00000593280 DBNLQ9UJU6 430 aaKnown RBP14.5□□□□□ -0.09
NPC1-214ENST00000593280 ATRNO75882 1429 aa14.5□□□□□ -0.09
NPC1-214ENST00000593280 LAMB2P55268 1798 aa14.5□□□□□ -0.09
NPC1-214ENST00000593280 SGSM2O43147 1006 aa14.49□□□□□ -0.09
NPC1-214ENST00000593280 ZNF34Q8IZ26 560 aa14.49□□□□□ -0.09
NPC1-214ENST00000593280 ZNF594Q96JF6 807 aaPredicted RBP14.49□□□□□ -0.09
NPC1-214ENST00000593280 GJD4Q96KN9 370 aaPredicted RBP14.49□□□□□ -0.09
NPC1-214ENST00000593280 ANTXR1Q9H6X2 564 aa14.49□□□□□ -0.09
NPC1-214ENST00000593280 GPR108Q9NPR9 543 aa14.49□□□□□ -0.09
NPC1-214ENST00000593280 TRMT112Q9UI30 125 aaKnown RBP14.49□□□□□ -0.09
NPC1-214ENST00000593280 UBN2Q6ZU65 1347 aa14.49□□□□□ -0.09
NPC1-214ENST00000593280 SBF2Q86WG5 1849 aa14.49□□□□□ -0.09
NPC1-214ENST00000593280 K7ELQ4 463 aaPredicted RBP14.48□□□□□ -0.09
NPC1-214ENST00000593280 HIP1O00291 1037 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms