RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 CCDC196A0A1B0GTZ2 297 aa14.4□□□□□ -0.1
SMARCA4-217ENST00000591595 FBXO18Q8NFZ0 1043 aa14.4□□□□□ -0.1
SMARCA4-217ENST00000591595 SMARCE1Q969G3 411 aa14.4□□□□□ -0.1
SMARCA4-217ENST00000591595 MRVI1Q9Y6F6 885 aa14.4□□□□□ -0.1
SMARCA4-217ENST00000591595 FOXO3O43524 673 aa14.4□□□□□ -0.1
SMARCA4-217ENST00000591595 ELF2Q15723 593 aa14.4□□□□□ -0.1
SMARCA4-217ENST00000591595 C11orf91Q3C1V1 193 aa14.4□□□□□ -0.1
SMARCA4-217ENST00000591595 SYAP1Q96A49 352 aaPredicted RBP14.4□□□□□ -0.1
SMARCA4-217ENST00000591595 ST5P78524 1137 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 CYB5RLQ6IPT4 315 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 GOLGA5Q8TBA6 731 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 ITFG2Q969R8 447 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 PRDM16Q9HAZ2 1276 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 H0YHG0 523 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 HTATSF1O43719 755 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 GNAI2P04899 355 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 SARNPP82979 210 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 PLCB2Q00722 1185 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 FAM69CQ0P6D2 419 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 CEP89Q96ST8 783 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 ZNF215Q9UL58 517 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 KIF20BQ96Q89 1820 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 ATP10DQ9P241 1426 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 METP08581 1390 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 ANAPC15P60006 121 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 CPSF1Q10570 1443 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 TMX3Q96JJ7 454 aa14.39□□□□□ -0.11
SMARCA4-217ENST00000591595 CCT4P50991 539 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-217ENST00000591595 FHOD1Q9Y613 1164 aa14.38□□□□□ -0.11
SMARCA4-217ENST00000591595 UPF3BQ9BZI7 483 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-217ENST00000591595 LRRCC1Q9C099 1032 aa14.37□□□□□ -0.11
SMARCA4-217ENST00000591595 HDGFP51858 240 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-217ENST00000591595 MMS22LQ6ZRQ5 1243 aa14.37□□□□□ -0.11
SMARCA4-217ENST00000591595 PPM1EQ8WY54 764 aa14.37□□□□□ -0.11
SMARCA4-217ENST00000591595 PREX1Q8TCU6 1659 aa14.37□□□□□ -0.11
SMARCA4-217ENST00000591595 PLA2G4AP47712 749 aa14.37□□□□□ -0.11
SMARCA4-217ENST00000591595 CLTCQ00610 1675 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-217ENST00000591595 TTC21BQ7Z4L5 1316 aa14.37□□□□□ -0.11
SMARCA4-217ENST00000591595 LIG1P18858 919 aa14.36□□□□□ -0.11
SMARCA4-217ENST00000591595 ZDHHC9Q9Y397 364 aa14.36□□□□□ -0.11
SMARCA4-217ENST00000591595 ACEP12821 1306 aa14.36□□□□□ -0.11
SMARCA4-217ENST00000591595 MX1P20591 662 aa14.36□□□□□ -0.11
SMARCA4-217ENST00000591595 SPC24Q8NBT2 197 aa14.36□□□□□ -0.11
SMARCA4-217ENST00000591595 KDM4AO75164 1064 aa14.36□□□□□ -0.11
SMARCA4-217ENST00000591595 PNMA6AP0CW24 399 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-217ENST00000591595 AMPHP49418 695 aa14.36□□□□□ -0.11
SMARCA4-217ENST00000591595 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
SMARCA4-217ENST00000591595 CPS1P31327 1500 aa14.35□□□□□ -0.11
SMARCA4-217ENST00000591595 PRR36Q9H6K5 1346 aa14.35□□□□□ -0.11
SMARCA4-217ENST00000591595 MTHFSDQ2M296 383 aaKnown RBP14.35□□□□□ -0.11
SMARCA4-217ENST00000591595 TBC1D22AQ8WUA7 517 aa14.35□□□□□ -0.11
SMARCA4-217ENST00000591595 KIAA0232Q92628 1395 aa14.34□□□□□ -0.11
SMARCA4-217ENST00000591595 ZC3H12AQ5D1E8 599 aaKnown RBP14.34□□□□□ -0.11
SMARCA4-217ENST00000591595 ERO1AQ96HE7 468 aa14.34□□□□□ -0.11
SMARCA4-217ENST00000591595 ESYT1Q9BSJ8 1104 aa14.34□□□□□ -0.11
SMARCA4-217ENST00000591595 IL1RAPL2Q9NP60 686 aa14.34□□□□□ -0.11
SMARCA4-217ENST00000591595 A2ML1A8K2U0 1454 aa14.34□□□□□ -0.11
SMARCA4-217ENST00000591595 MCM2P49736 904 aa14.34□□□□□ -0.11
SMARCA4-217ENST00000591595 GDPD2Q9HCC8 539 aa14.34□□□□□ -0.11
SMARCA4-217ENST00000591595 GNAI3P08754 354 aa14.34□□□□□ -0.11
SMARCA4-217ENST00000591595 PALD1Q9ULE6 856 aa14.34□□□□□ -0.11
SMARCA4-217ENST00000591595 REREQ9P2R6 1566 aa14.33□□□□□ -0.11
SMARCA4-217ENST00000591595 EIF3CLB5ME19 914 aaKnown RBP14.33□□□□□ -0.11
SMARCA4-217ENST00000591595 EIF3CQ99613 913 aaKnown RBP14.33□□□□□ -0.11
SMARCA4-217ENST00000591595 RGS12O14924 1447 aa14.33□□□□□ -0.12
SMARCA4-217ENST00000591595 HCLS1P14317 486 aaPredicted RBP14.33□□□□□ -0.12
SMARCA4-217ENST00000591595 AK7Q96M32 723 aa14.33□□□□□ -0.12
SMARCA4-217ENST00000591595 SCP2P22307 547 aa14.33□□□□□ -0.12
SMARCA4-217ENST00000591595 FLIIQ13045 1269 aa14.33□□□□□ -0.12
SMARCA4-217ENST00000591595 MAP3K19Q56UN5 1328 aa14.32□□□□□ -0.12
SMARCA4-217ENST00000591595 PNMA6EA0A0J9YXQ4 647 aa14.32□□□□□ -0.12
SMARCA4-217ENST00000591595 MAP4K4O95819 1239 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-217ENST00000591595 RNF20Q5VTR2 975 aa14.32□□□□□ -0.12
SMARCA4-217ENST00000591595 IQUBQ8NA54 791 aa14.32□□□□□ -0.12
SMARCA4-217ENST00000591595 NGDNQ8NEJ9 315 aaKnown RBP14.32□□□□□ -0.12
SMARCA4-217ENST00000591595 NPHP1O15259 732 aa14.32□□□□□ -0.12
SMARCA4-217ENST00000591595 CEP135Q66GS9 1140 aa14.32□□□□□ -0.12
SMARCA4-217ENST00000591595 TTC19Q6DKK2 380 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-217ENST00000591595 LTV1Q96GA3 475 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-217ENST00000591595 NBPF3Q9H094 633 aa14.32□□□□□ -0.12
SMARCA4-217ENST00000591595 H2AFXP16104 143 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-217ENST00000591595 INHBEP58166 350 aa14.31□□□□□ -0.12
SMARCA4-217ENST00000591595 CCDC30Q5VVM6 783 aa14.31□□□□□ -0.12
SMARCA4-217ENST00000591595 OSBPL3Q9H4L5 887 aa14.31□□□□□ -0.12
SMARCA4-217ENST00000591595 KNDC1Q76NI1 1749 aa14.31□□□□□ -0.12
SMARCA4-217ENST00000591595 PTGS1P23219 599 aa14.31□□□□□ -0.12
SMARCA4-217ENST00000591595 TPD52L1Q16890 204 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-217ENST00000591595 DLC1Q96QB1 1528 aa14.3□□□□□ -0.12
SMARCA4-217ENST00000591595 IVLP07476 585 aa14.3□□□□□ -0.12
SMARCA4-217ENST00000591595 CHMLP26374 656 aa14.3□□□□□ -0.12
SMARCA4-217ENST00000591595 CLCN6P51797 869 aa14.3□□□□□ -0.12
SMARCA4-217ENST00000591595 NUTM1Q86Y26 1132 aa14.3□□□□□ -0.12
SMARCA4-217ENST00000591595 UBTFL1P0CB47 393 aaPredicted RBP14.3□□□□□ -0.12
SMARCA4-217ENST00000591595 TTLL5Q6EMB2 1281 aa14.3□□□□□ -0.12
SMARCA4-217ENST00000591595 DNAAF4Q8WXU2 420 aa14.3□□□□□ -0.12
SMARCA4-217ENST00000591595 SMC2O95347 1197 aa14.3□□□□□ -0.12
SMARCA4-217ENST00000591595 TPM1P09493 284 aa14.3□□□□□ -0.12
SMARCA4-217ENST00000591595 ACTN2P35609 894 aa14.3□□□□□ -0.12
SMARCA4-217ENST00000591595 SURF6O75683 361 aaKnown RBP14.29□□□□□ -0.12
SMARCA4-217ENST00000591595 LMAN1P49257 510 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms