RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 KIAA1211Q6ZU35 1233 aa12.62□□□□□ -0.39
VPS25-206ENST00000591584 MAP3K15Q6ZN16 1313 aa12.62□□□□□ -0.39
VPS25-206ENST00000591584 JCADQ9P266 1359 aa12.61□□□□□ -0.39
VPS25-206ENST00000591584 SGSM2O43147 1006 aa12.61□□□□□ -0.39
VPS25-206ENST00000591584 CYP19A1P11511 503 aaPredicted RBP12.61□□□□□ -0.39
VPS25-206ENST00000591584 PIP4K2AP48426 406 aaPredicted RBP12.61□□□□□ -0.39
VPS25-206ENST00000591584 EPHA10Q5JZY3 1008 aa12.61□□□□□ -0.39
VPS25-206ENST00000591584 LMBR1LQ6UX01 489 aa12.61□□□□□ -0.39
VPS25-206ENST00000591584 GIGYF2Q6Y7W6 1299 aaKnown RBP12.61□□□□□ -0.39
VPS25-206ENST00000591584 UNC5CLQ8IV45 518 aa12.61□□□□□ -0.39
VPS25-206ENST00000591584 EAF2Q96CJ1 260 aaPredicted RBP12.61□□□□□ -0.39
VPS25-206ENST00000591584 CWC22Q9HCG8 908 aaKnown RBP12.61□□□□□ -0.39
VPS25-206ENST00000591584 RAD50Q92878 1312 aa12.61□□□□□ -0.39
VPS25-206ENST00000591584 CDHR2Q9BYE9 1310 aa12.61□□□□□ -0.39
VPS25-206ENST00000591584 HSP90AA1P07900 732 aaKnown RBP12.6□□□□□ -0.39
VPS25-206ENST00000591584 HSP90B1P14625 803 aaKnown RBP12.6□□□□□ -0.39
VPS25-206ENST00000591584 ATP5JP18859 108 aa12.6□□□□□ -0.39
VPS25-206ENST00000591584 PTMSP20962 102 aa12.6□□□□□ -0.39
VPS25-206ENST00000591584 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
VPS25-206ENST00000591584 TSHZ3Q63HK5 1081 aa12.6□□□□□ -0.39
VPS25-206ENST00000591584 ZBTB38Q8NAP3 1195 aaPredicted RBP12.6□□□□□ -0.39
VPS25-206ENST00000591584 AK7Q96M32 723 aa12.6□□□□□ -0.39
VPS25-206ENST00000591584 SLKQ9H2G2 1235 aaPredicted RBP12.6□□□□□ -0.39
VPS25-206ENST00000591584 ZBTB3Q9H5J0 574 aa12.6□□□□□ -0.39
VPS25-206ENST00000591584 ANO2Q9NQ90 1003 aa12.6□□□□□ -0.39
VPS25-206ENST00000591584 NWD2Q9ULI1 1742 aa12.59□□□□□ -0.39
VPS25-206ENST00000591584 ARFGEF2Q9Y6D5 1785 aa12.59□□□□□ -0.39
VPS25-206ENST00000591584 UBAP1LF5GYI3 381 aa12.59□□□□□ -0.39
VPS25-206ENST00000591584 RGL2O15211 777 aa12.59□□□□□ -0.39
VPS25-206ENST00000591584 PIP4K2BP78356 416 aa12.59□□□□□ -0.39
VPS25-206ENST00000591584 VPS72Q15906 364 aa12.59□□□□□ -0.39
VPS25-206ENST00000591584 DIAPH3Q9NSV4 1193 aa12.59□□□□□ -0.39
VPS25-206ENST00000591584 TOGARAM1Q9Y4F4 1720 aa12.59□□□□□ -0.39
VPS25-206ENST00000591584 SPATA31A6Q5VVP1 1343 aa12.59□□□□□ -0.39
VPS25-206ENST00000591584 RFX7Q2KHR2 1363 aa12.58□□□□□ -0.4
VPS25-206ENST00000591584 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
VPS25-206ENST00000591584 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
VPS25-206ENST00000591584 EYA2O00167 538 aa12.58□□□□□ -0.4
VPS25-206ENST00000591584 HSPA4P34932 840 aa12.58□□□□□ -0.4
VPS25-206ENST00000591584 DDIT3P35638 169 aa12.58□□□□□ -0.4
VPS25-206ENST00000591584 TNNI3KQ59H18 835 aa12.58□□□□□ -0.4
VPS25-206ENST00000591584 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
VPS25-206ENST00000591584 SYTL4Q96C24 671 aaPredicted RBP12.58□□□□□ -0.4
VPS25-206ENST00000591584 SNRKQ9NRH2 765 aa12.58□□□□□ -0.4
VPS25-206ENST00000591584 AKAP2Q9Y2D5 859 aa12.58□□□□□ -0.4
VPS25-206ENST00000591584 FPGT-TNNI3KV9GXZ4 949 aa12.58□□□□□ -0.4
VPS25-206ENST00000591584 CSF1RP07333 972 aa12.57□□□□□ -0.4
VPS25-206ENST00000591584 CCDC57Q2TAC2 916 aa12.57□□□□□ -0.4
VPS25-206ENST00000591584 FNBP4Q8N3X1 1017 aaPredicted RBP12.57□□□□□ -0.4
VPS25-206ENST00000591584 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.57□□□□□ -0.4
VPS25-206ENST00000591584 CCDC8Q9H0W5 538 aaPredicted RBP12.57□□□□□ -0.4
VPS25-206ENST00000591584 SIL1Q9H173 461 aa12.57□□□□□ -0.4
VPS25-206ENST00000591584 CCDC9Q9Y3X0 531 aaKnown RBP12.57□□□□□ -0.4
VPS25-206ENST00000591584 NRAPQ86VF7 1730 aa12.57□□□□□ -0.4
VPS25-206ENST00000591584 NUCB2P80303 420 aa12.56□□□□□ -0.4
VPS25-206ENST00000591584 TFCP2Q12800 502 aa12.56□□□□□ -0.4
VPS25-206ENST00000591584 LRRFIP1Q32MZ4 808 aaKnown RBP12.56□□□□□ -0.4
VPS25-206ENST00000591584 MARCH10Q8NA82 808 aaPredicted RBP12.56□□□□□ -0.4
VPS25-206ENST00000591584 CHMP3Q9Y3E7 222 aa12.56□□□□□ -0.4
VPS25-206ENST00000591584 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
VPS25-206ENST00000591584 NUP188Q5SRE5 1749 aa12.55□□□□□ -0.4
VPS25-206ENST00000591584 EIF5P55010 431 aaKnown RBP12.55□□□□□ -0.4
VPS25-206ENST00000591584 NLRP10Q86W26 655 aa12.55□□□□□ -0.4
VPS25-206ENST00000591584 NGLY1Q96IV0 654 aa12.55□□□□□ -0.4
VPS25-206ENST00000591584 SLC4A9Q96Q91 983 aa12.55□□□□□ -0.4
VPS25-206ENST00000591584 LSG1Q9H089 658 aaKnown RBP12.55□□□□□ -0.4
VPS25-206ENST00000591584 CCDC87Q9NVE4 849 aa12.55□□□□□ -0.4
VPS25-206ENST00000591584 CEP126Q9P2H0 1117 aa12.55□□□□□ -0.4
VPS25-206ENST00000591584 WNK3Q9BYP7 1800 aa12.55□□□□□ -0.4
VPS25-206ENST00000591584 ITGB4P16144 1822 aa12.54□□□□□ -0.4
VPS25-206ENST00000591584 AFDNP55196 1824 aaKnown RBP12.54□□□□□ -0.4
VPS25-206ENST00000591584 ATP6V1AP38606 617 aa12.54□□□□□ -0.4
VPS25-206ENST00000591584 NEK4P51957 841 aa12.54□□□□□ -0.4
VPS25-206ENST00000591584 IFIT5Q13325 482 aaKnown RBP12.54□□□□□ -0.4
VPS25-206ENST00000591584 PARP10Q53GL7 1025 aa12.54□□□□□ -0.4
VPS25-206ENST00000591584 CWC27Q6UX04 472 aaKnown RBP12.54□□□□□ -0.4
VPS25-206ENST00000591584 ATG9AQ7Z3C6 839 aa12.54□□□□□ -0.4
VPS25-206ENST00000591584 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
VPS25-206ENST00000591584 ZNF34Q8IZ26 560 aa12.54□□□□□ -0.4
VPS25-206ENST00000591584 KLHDC4Q8TBB5 520 aa12.54□□□□□ -0.4
VPS25-206ENST00000591584 KCNB2Q92953 911 aa12.54□□□□□ -0.4
VPS25-206ENST00000591584 INTS4Q96HW7 963 aaKnown RBP12.54□□□□□ -0.4
VPS25-206ENST00000591584 GBP4Q96PP9 640 aa12.54□□□□□ -0.4
VPS25-206ENST00000591584 HAUS7Q99871 368 aa12.54□□□□□ -0.4
VPS25-206ENST00000591584 ZBTB1Q9Y2K1 713 aa12.54□□□□□ -0.4
VPS25-206ENST00000591584 ZNF330Q9Y3S2 320 aaPredicted RBP12.54□□□□□ -0.4
VPS25-206ENST00000591584 LOC102724428A0A0B4J2F2 783 aa12.53□□□□□ -0.4
VPS25-206ENST00000591584 DDX11L8A8MPP1 907 aa12.53□□□□□ -0.4
VPS25-206ENST00000591584 PDE8AO60658 829 aa12.53□□□□□ -0.4
VPS25-206ENST00000591584 FRAT2O75474 233 aaPredicted RBP12.53□□□□□ -0.4
VPS25-206ENST00000591584 MAP4K4O95819 1239 aaPredicted RBP12.53□□□□□ -0.4
VPS25-206ENST00000591584 SIK1P57059 783 aa12.53□□□□□ -0.4
VPS25-206ENST00000591584 RAB3GAP1Q15042 981 aa12.53□□□□□ -0.4
VPS25-206ENST00000591584 RNF20Q5VTR2 975 aa12.53□□□□□ -0.4
VPS25-206ENST00000591584 PIAS4Q8N2W9 510 aaPredicted RBP12.53□□□□□ -0.4
VPS25-206ENST00000591584 JARID2Q92833 1246 aaPredicted RBP12.53□□□□□ -0.4
VPS25-206ENST00000591584 ARXQ96QS3 562 aa12.53□□□□□ -0.4
VPS25-206ENST00000591584 FSD1Q9BTV5 496 aa12.53□□□□□ -0.4
VPS25-206ENST00000591584 TM6SF1Q9BZW5 370 aa12.53□□□□□ -0.4
VPS25-206ENST00000591584 BOLA2Q9H3K6 86 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms