RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 ANKRD36CQ5JPF3 1778 aa16.05■□□□□ 0.16
PTBP1-216ENST00000590887 CDHR2Q9BYE9 1310 aa16.05■□□□□ 0.16
PTBP1-216ENST00000590887 PNMA6EA0A0J9YXQ4 647 aa16.05■□□□□ 0.16
PTBP1-216ENST00000590887 PLSCR1O15162 318 aa16.05■□□□□ 0.16
PTBP1-216ENST00000590887 ZPR1O75312 459 aa16.05■□□□□ 0.16
PTBP1-216ENST00000590887 KIF1BPQ96EK5 621 aa16.05■□□□□ 0.16
PTBP1-216ENST00000590887 NOP58Q9Y2X3 529 aaKnown RBP16.05■□□□□ 0.16
PTBP1-216ENST00000590887 FAM161AQ3B820 660 aa16.04■□□□□ 0.16
PTBP1-216ENST00000590887 RABL6Q3YEC7 729 aaPredicted RBP16.04■□□□□ 0.16
PTBP1-216ENST00000590887 TRAPPC3LQ5T215 181 aa16.04■□□□□ 0.16
PTBP1-216ENST00000590887 ZNF34Q8IZ26 560 aa16.04■□□□□ 0.16
PTBP1-216ENST00000590887 BICC1Q9H694 974 aaKnown RBP16.04■□□□□ 0.16
PTBP1-216ENST00000590887 TNS1Q9HBL0 1735 aaKnown RBP16.03■□□□□ 0.16
PTBP1-216ENST00000590887 GNPATO15228 680 aa16.03■□□□□ 0.16
PTBP1-216ENST00000590887 NLRP10Q86W26 655 aa16.03■□□□□ 0.16
PTBP1-216ENST00000590887 PLA2G12BQ9BX93 195 aa16.03■□□□□ 0.16
PTBP1-216ENST00000590887 NARFQ9UHQ1 456 aa16.03■□□□□ 0.16
PTBP1-216ENST00000590887 MYH14Q7Z406 1995 aaKnown RBP16.02■□□□□ 0.16
PTBP1-216ENST00000590887 CAMTA2O94983 1202 aa16.02■□□□□ 0.16
PTBP1-216ENST00000590887 CASP7P55210 303 aa16.02■□□□□ 0.16
PTBP1-216ENST00000590887 SF3B2Q13435 895 aaKnown RBP16.02■□□□□ 0.16
PTBP1-216ENST00000590887 HLFQ16534 295 aa16.02■□□□□ 0.16
PTBP1-216ENST00000590887 UTP14AQ9BVJ6 771 aaKnown RBP16.02■□□□□ 0.16
PTBP1-216ENST00000590887 TRMT112Q9UI30 125 aaKnown RBP16.02■□□□□ 0.16
PTBP1-216ENST00000590887 EXOC6BQ9Y2D4 811 aa16.02■□□□□ 0.16
PTBP1-216ENST00000590887 TAF1LQ8IZX4 1826 aa16.02■□□□□ 0.16
PTBP1-216ENST00000590887 RFC4P35249 363 aa16.01■□□□□ 0.15
PTBP1-216ENST00000590887 PTF1AQ7RTS3 328 aa16.01■□□□□ 0.15
PTBP1-216ENST00000590887 CLASRPQ8N2M8 674 aaKnown RBP16.01■□□□□ 0.15
PTBP1-216ENST00000590887 NYXQ9GZU5 481 aa16.01■□□□□ 0.15
PTBP1-216ENST00000590887 COPRSQ9NQ92 184 aa16.01■□□□□ 0.15
PTBP1-216ENST00000590887 FBXO3Q9UK99 471 aa16.01■□□□□ 0.15
PTBP1-216ENST00000590887 CHMP3Q9Y3E7 222 aa16.01■□□□□ 0.15
PTBP1-216ENST00000590887 SH3TC1Q8TE82 1336 aa16■□□□□ 0.15
PTBP1-216ENST00000590887 PDE8AO60658 829 aa16■□□□□ 0.15
PTBP1-216ENST00000590887 APBA3O96018 575 aa16■□□□□ 0.15
PTBP1-216ENST00000590887 GPTP24298 496 aa16■□□□□ 0.15
PTBP1-216ENST00000590887 PDE4AP27815 886 aa16■□□□□ 0.15
PTBP1-216ENST00000590887 CCDC57Q2TAC2 916 aa16■□□□□ 0.15
PTBP1-216ENST00000590887 RHPN1Q8TCX5 695 aa16■□□□□ 0.15
PTBP1-216ENST00000590887 GPATCH3Q96I76 525 aa16■□□□□ 0.15
PTBP1-216ENST00000590887 NIP7Q9Y221 180 aaKnown RBP eCLIP16■□□□□ 0.15
PTBP1-216ENST00000590887 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
PTBP1-216ENST00000590887 APBB1O00213 710 aa15.99■□□□□ 0.15
PTBP1-216ENST00000590887 LMBR1LQ6UX01 489 aa15.99■□□□□ 0.15
PTBP1-216ENST00000590887 FLAD1Q8NFF5 587 aa15.99■□□□□ 0.15
PTBP1-216ENST00000590887 KAZALD1Q96I82 304 aa15.99■□□□□ 0.15
PTBP1-216ENST00000590887 BCORQ6W2J9 1755 aa15.98■□□□□ 0.15
PTBP1-216ENST00000590887 IRS4O14654 1257 aaPredicted RBP15.98■□□□□ 0.15
PTBP1-216ENST00000590887 SSFA2P28290 1259 aa15.98■□□□□ 0.15
PTBP1-216ENST00000590887 TXNRD1Q16881 649 aa15.98■□□□□ 0.15
PTBP1-216ENST00000590887 TAF7LQ5H9L4 462 aa15.98■□□□□ 0.15
PTBP1-216ENST00000590887 DEFB132Q7Z7B7 95 aa15.98■□□□□ 0.15
PTBP1-216ENST00000590887 SETDB2Q96T68 719 aa15.98■□□□□ 0.15
PTBP1-216ENST00000590887 BACH2Q9BYV9 841 aa15.98■□□□□ 0.15
PTBP1-216ENST00000590887 AOX1Q06278 1338 aa15.97■□□□□ 0.15
PTBP1-216ENST00000590887 GTF2E1P29083 439 aaPredicted RBP15.97■□□□□ 0.15
PTBP1-216ENST00000590887 BAG6P46379 1132 aa15.97■□□□□ 0.15
PTBP1-216ENST00000590887 FOXO4P98177 505 aa15.97■□□□□ 0.15
PTBP1-216ENST00000590887 IFIT5Q13325 482 aaKnown RBP15.97■□□□□ 0.15
PTBP1-216ENST00000590887 BMP2KLQ5H9B9 411 aa15.97■□□□□ 0.15
PTBP1-216ENST00000590887 FAM89AQ96GI7 184 aa15.97■□□□□ 0.15
PTBP1-216ENST00000590887 OSBPL3Q9H4L5 887 aa15.97■□□□□ 0.15
PTBP1-216ENST00000590887 ANKRD18BA2A2Z9 1011 aa15.96■□□□□ 0.15
PTBP1-216ENST00000590887 CSF1RP07333 972 aa15.96■□□□□ 0.15
PTBP1-216ENST00000590887 IFIT2P09913 472 aaKnown RBP15.96■□□□□ 0.15
PTBP1-216ENST00000590887 CASC1Q6TDU7 716 aa15.96■□□□□ 0.15
PTBP1-216ENST00000590887 PLEKHM2Q8IWE5 1019 aa15.96■□□□□ 0.15
PTBP1-216ENST00000590887 UPF2Q9HAU5 1272 aaKnown RBP15.96■□□□□ 0.15
PTBP1-216ENST00000590887 TSHZ2Q9NRE2 1034 aa15.96■□□□□ 0.15
PTBP1-216ENST00000590887 ERC2O15083 957 aa15.95■□□□□ 0.14
PTBP1-216ENST00000590887 CIAO1O76071 339 aa15.95■□□□□ 0.14
PTBP1-216ENST00000590887 IL15P40933 162 aaPredicted RBP15.95■□□□□ 0.14
PTBP1-216ENST00000590887 KCNQ4P56696 695 aa15.95■□□□□ 0.14
PTBP1-216ENST00000590887 RTL5Q5HYW3 569 aaPredicted RBP15.95■□□□□ 0.14
PTBP1-216ENST00000590887 EPHA10Q5JZY3 1008 aa15.95■□□□□ 0.14
PTBP1-216ENST00000590887 SUSD4Q5VX71 490 aa15.95■□□□□ 0.14
PTBP1-216ENST00000590887 USPL1Q5W0Q7 1092 aa15.95■□□□□ 0.14
PTBP1-216ENST00000590887 TPTE2Q6XPS3 522 aa15.95■□□□□ 0.14
PTBP1-216ENST00000590887 JARID2Q92833 1246 aaPredicted RBP15.95■□□□□ 0.14
PTBP1-216ENST00000590887 ARHGEF1Q92888 912 aaKnown RBP15.95■□□□□ 0.14
PTBP1-216ENST00000590887 MYH3P11055 1940 aa15.95■□□□□ 0.14
PTBP1-216ENST00000590887 RGPD3A6NKT7 1758 aaPredicted RBP15.95■□□□□ 0.14
PTBP1-216ENST00000590887 RGPD4Q7Z3J3 1758 aa15.95■□□□□ 0.14
PTBP1-216ENST00000590887 SMARCA5O60264 1052 aaPredicted RBP15.94■□□□□ 0.14
PTBP1-216ENST00000590887 MX1P20591 662 aa15.94■□□□□ 0.14
PTBP1-216ENST00000590887 CTSWP56202 376 aa15.94■□□□□ 0.14
PTBP1-216ENST00000590887 CCDC152Q4G0S7 254 aa15.94■□□□□ 0.14
PTBP1-216ENST00000590887 SKAP1Q86WV1 359 aa15.94■□□□□ 0.14
PTBP1-216ENST00000590887 SCN7AQ01118 1682 aa15.94■□□□□ 0.14
PTBP1-216ENST00000590887 TTC41PQ6P2S7 1318 aa15.94■□□□□ 0.14
PTBP1-216ENST00000590887 NPHP1O15259 732 aa15.93■□□□□ 0.14
PTBP1-216ENST00000590887 RFX5P48382 616 aaPredicted RBP15.93■□□□□ 0.14
PTBP1-216ENST00000590887 PTPN12Q05209 780 aaKnown RBP15.93■□□□□ 0.14
PTBP1-216ENST00000590887 TTC22Q5TAA0 569 aa15.93■□□□□ 0.14
PTBP1-216ENST00000590887 LRRC4BQ9NT99 713 aa15.93■□□□□ 0.14
PTBP1-216ENST00000590887 STAP2Q9UGK3 403 aa15.93■□□□□ 0.14
PTBP1-216ENST00000590887 UBN2Q6ZU65 1347 aa15.93■□□□□ 0.14
PTBP1-216ENST00000590887 USP42Q9H9J4 1324 aaKnown RBP15.93■□□□□ 0.14
PTBP1-216ENST00000590887 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms