RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 BCORQ6W2J9 1755 aa21.71■■□□□ 1.07
CXXC1-212ENST00000589940 CLEC4GQ6UXB4 293 aa21.71■■□□□ 1.07
CXXC1-212ENST00000589940 PCCAP05165 728 aaPredicted RBP21.7■■□□□ 1.06
CXXC1-212ENST00000589940 ZBTB38Q8NAP3 1195 aaPredicted RBP21.7■■□□□ 1.06
CXXC1-212ENST00000589940 NARFQ9UHQ1 456 aa21.7■■□□□ 1.06
CXXC1-212ENST00000589940 UBN2Q6ZU65 1347 aa21.69■■□□□ 1.06
CXXC1-212ENST00000589940 EPHA10Q5JZY3 1008 aa21.69■■□□□ 1.06
CXXC1-212ENST00000589940 ANKRD45Q5TZF3 282 aa21.69■■□□□ 1.06
CXXC1-212ENST00000589940 CHD1LQ86WJ1 897 aa21.69■■□□□ 1.06
CXXC1-212ENST00000589940 AMIGO3Q86WK7 504 aa21.69■■□□□ 1.06
CXXC1-212ENST00000589940 RABL6Q3YEC7 729 aaPredicted RBP21.68■■□□□ 1.06
CXXC1-212ENST00000589940 RTL5Q5HYW3 569 aaPredicted RBP21.68■■□□□ 1.06
CXXC1-212ENST00000589940 SMIM5Q71RC9 77 aa21.68■■□□□ 1.06
CXXC1-212ENST00000589940 SCN7AQ01118 1682 aa21.68■■□□□ 1.06
CXXC1-212ENST00000589940 RGS3P49796 1198 aa21.68■■□□□ 1.06
CXXC1-212ENST00000589940 ADRA2BP18089 450 aa21.67■■□□□ 1.06
CXXC1-212ENST00000589940 PARP10Q53GL7 1025 aa21.67■■□□□ 1.06
CXXC1-212ENST00000589940 TRAPPC3LQ5T215 181 aa21.67■■□□□ 1.06
CXXC1-212ENST00000589940 ARHGEF1Q92888 912 aaKnown RBP21.67■■□□□ 1.06
CXXC1-212ENST00000589940 RGPD3A6NKT7 1758 aaPredicted RBP21.67■■□□□ 1.06
CXXC1-212ENST00000589940 RGPD4Q7Z3J3 1758 aa21.67■■□□□ 1.06
CXXC1-212ENST00000589940 FAM89AQ96GI7 184 aa21.67■■□□□ 1.06
CXXC1-212ENST00000589940 ZPR1O75312 459 aa21.66■■□□□ 1.06
CXXC1-212ENST00000589940 LNPKQ9C0E8 428 aa21.66■■□□□ 1.06
CXXC1-212ENST00000589940 NIP7Q9Y221 180 aaKnown RBP eCLIP21.66■■□□□ 1.06
CXXC1-212ENST00000589940 EXOC6BQ9Y2D4 811 aa21.66■■□□□ 1.06
CXXC1-212ENST00000589940 TRMT112Q9UI30 125 aaKnown RBP21.65■■□□□ 1.06
CXXC1-212ENST00000589940 CDHR2Q9BYE9 1310 aa21.65■■□□□ 1.06
CXXC1-212ENST00000589940 PHF14O94880 888 aa21.65■■□□□ 1.06
CXXC1-212ENST00000589940 FOXO4P98177 505 aa21.65■■□□□ 1.06
CXXC1-212ENST00000589940 USPL1Q5W0Q7 1092 aa21.65■■□□□ 1.06
CXXC1-212ENST00000589940 UBR3Q6ZT12 1888 aa21.65■■□□□ 1.06
CXXC1-212ENST00000589940 RFC4P35249 363 aa21.64■■□□□ 1.06
CXXC1-212ENST00000589940 BCL2L12Q9HB09 334 aa21.64■■□□□ 1.06
CXXC1-212ENST00000589940 SRP68Q9UHB9 627 aaKnown RBP21.64■■□□□ 1.06
CXXC1-212ENST00000589940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.64■■□□□ 1.05
CXXC1-212ENST00000589940 SURF6O75683 361 aaKnown RBP21.64■■□□□ 1.05
CXXC1-212ENST00000589940 SSFA2P28290 1259 aa21.64■■□□□ 1.05
CXXC1-212ENST00000589940 PLA2G12BQ9BX93 195 aa21.64■■□□□ 1.05
CXXC1-212ENST00000589940 ZBTB47Q9UFB7 747 aaPredicted RBP21.64■■□□□ 1.05
CXXC1-212ENST00000589940 USP42Q9H9J4 1324 aaKnown RBP21.64■■□□□ 1.05
CXXC1-212ENST00000589940 PDE4AP27815 886 aa21.63■■□□□ 1.05
CXXC1-212ENST00000589940 SUSD4Q5VX71 490 aa21.63■■□□□ 1.05
CXXC1-212ENST00000589940 LMBR1LQ6UX01 489 aa21.63■■□□□ 1.05
CXXC1-212ENST00000589940 NOP58Q9Y2X3 529 aaKnown RBP21.63■■□□□ 1.05
CXXC1-212ENST00000589940 C4AP0C0L4 1744 aa21.63■■□□□ 1.05
CXXC1-212ENST00000589940 APBB1O00213 710 aa21.63■■□□□ 1.05
CXXC1-212ENST00000589940 UTP14AQ9BVJ6 771 aaKnown RBP21.63■■□□□ 1.05
CXXC1-212ENST00000589940 HSP90AB4PQ58FF6 505 aa21.62■■□□□ 1.05
CXXC1-212ENST00000589940 RAB11FIP3O75154 756 aa21.61■■□□□ 1.05
CXXC1-212ENST00000589940 SH3TC1Q8TE82 1336 aa21.61■■□□□ 1.05
CXXC1-212ENST00000589940 SYNE4Q8N205 404 aa21.61■■□□□ 1.05
CXXC1-212ENST00000589940 LRRCC1Q9C099 1032 aa21.61■■□□□ 1.05
CXXC1-212ENST00000589940 IRS4O14654 1257 aaPredicted RBP21.6■■□□□ 1.05
CXXC1-212ENST00000589940 NTSR2O95665 410 aa21.6■■□□□ 1.05
CXXC1-212ENST00000589940 TBC1D9BQ66K14 1250 aa21.6■■□□□ 1.05
CXXC1-212ENST00000589940 AKT1S1Q96B36 256 aa21.6■■□□□ 1.05
CXXC1-212ENST00000589940 PA2G4Q9UQ80 394 aaKnown RBP21.6■■□□□ 1.05
CXXC1-212ENST00000589940 RFX5P48382 616 aaPredicted RBP21.59■■□□□ 1.05
CXXC1-212ENST00000589940 SMARCA5O60264 1052 aaPredicted RBP21.59■■□□□ 1.05
CXXC1-212ENST00000589940 ZNF827Q17R98 1081 aa21.59■■□□□ 1.05
CXXC1-212ENST00000589940 CAMKK2Q96RR4 588 aa21.59■■□□□ 1.05
CXXC1-212ENST00000589940 COPRSQ9NQ92 184 aa21.59■■□□□ 1.05
CXXC1-212ENST00000589940 CHMP3Q9Y3E7 222 aa21.59■■□□□ 1.05
CXXC1-212ENST00000589940 FAM177BA6PVY3 158 aa21.58■■□□□ 1.05
CXXC1-212ENST00000589940 CSF1RP07333 972 aa21.57■■□□□ 1.04
CXXC1-212ENST00000589940 SF3B2Q13435 895 aaKnown RBP21.57■■□□□ 1.04
CXXC1-212ENST00000589940 KIF1BPQ96EK5 621 aa21.57■■□□□ 1.04
CXXC1-212ENST00000589940 SETDB2Q96T68 719 aa21.57■■□□□ 1.04
CXXC1-212ENST00000589940 TFCP2L1Q9NZI6 479 aa21.57■■□□□ 1.04
CXXC1-212ENST00000589940 PDE8AO60658 829 aa21.57■■□□□ 1.04
CXXC1-212ENST00000589940 PTPN12Q05209 780 aaKnown RBP21.57■■□□□ 1.04
CXXC1-212ENST00000589940 EN1Q05925 392 aaPredicted RBP21.57■■□□□ 1.04
CXXC1-212ENST00000589940 OS9Q13438 667 aaPredicted RBP21.57■■□□□ 1.04
CXXC1-212ENST00000589940 BICDL1Q6ZP65 573 aa21.57■■□□□ 1.04
CXXC1-212ENST00000589940 HSP90B1P14625 803 aaKnown RBP21.56■■□□□ 1.04
CXXC1-212ENST00000589940 ERC1Q8IUD2 1116 aa21.56■■□□□ 1.04
CXXC1-212ENST00000589940 KLHDC4Q8TBB5 520 aa21.56■■□□□ 1.04
CXXC1-212ENST00000589940 RHPN1Q8TCX5 695 aa21.56■■□□□ 1.04
CXXC1-212ENST00000589940 CTSWP56202 376 aa21.56■■□□□ 1.04
CXXC1-212ENST00000589940 G3BP1Q13283 466 aaKnown RBP eCLIP21.56■■□□□ 1.04
CXXC1-212ENST00000589940 EZH2Q15910 746 aaKnown RBP21.56■■□□□ 1.04
CXXC1-212ENST00000589940 BAG6P46379 1132 aa21.55■■□□□ 1.04
CXXC1-212ENST00000589940 TTLL11Q8NHH1 800 aa21.55■■□□□ 1.04
CXXC1-212ENST00000589940 NYXQ9GZU5 481 aa21.55■■□□□ 1.04
CXXC1-212ENST00000589940 COL24A1Q17RW2 1714 aa21.55■■□□□ 1.04
CXXC1-212ENST00000589940 NUTM1Q86Y26 1132 aa21.54■■□□□ 1.04
CXXC1-212ENST00000589940 C16orf71Q8IYS4 520 aaPredicted RBP21.54■■□□□ 1.04
CXXC1-212ENST00000589940 BCL11AQ9H165 835 aa21.54■■□□□ 1.04
CXXC1-212ENST00000589940 SIL1Q9H173 461 aa21.54■■□□□ 1.04
CXXC1-212ENST00000589940 GYS1P13807 737 aa21.53■■□□□ 1.04
CXXC1-212ENST00000589940 HCLS1P14317 486 aaPredicted RBP21.53■■□□□ 1.04
CXXC1-212ENST00000589940 CCDC57Q2TAC2 916 aa21.53■■□□□ 1.04
CXXC1-212ENST00000589940 FAM161AQ3B820 660 aa21.53■■□□□ 1.04
CXXC1-212ENST00000589940 FLAD1Q8NFF5 587 aa21.53■■□□□ 1.04
CXXC1-212ENST00000589940 MYH3P11055 1940 aa21.52■■□□□ 1.04
CXXC1-212ENST00000589940 NBPF5PQ86XG9 351 aaPredicted RBP21.52■■□□□ 1.04
CXXC1-212ENST00000589940 PLEKHM2Q8IWE5 1019 aa21.52■■□□□ 1.04
CXXC1-212ENST00000589940 IL1RAPL2Q9NP60 686 aa21.52■■□□□ 1.04
CXXC1-212ENST00000589940 IFIT5Q13325 482 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms