RNA–Protein interactions for RNA: ENST00000589934.1

APBA3-204, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 2

Gene APBA3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-204ENST00000589934 ZNF652Q9Y2D9 606 aa16.69■□□□□ 0.26
APBA3-204ENST00000589934 COL24A1Q17RW2 1714 aa16.69■□□□□ 0.26
APBA3-204ENST00000589934 GPTP24298 496 aa16.68■□□□□ 0.26
APBA3-204ENST00000589934 CWC25Q9NXE8 425 aaPredicted RBP16.68■□□□□ 0.26
APBA3-204ENST00000589934 NIP7Q9Y221 180 aaKnown RBP eCLIP16.68■□□□□ 0.26
APBA3-204ENST00000589934 CASZ1Q86V15 1759 aa16.68■□□□□ 0.26
APBA3-204ENST00000589934 GRM8O00222 908 aa16.67■□□□□ 0.26
APBA3-204ENST00000589934 NTSR2O95665 410 aa16.67■□□□□ 0.26
APBA3-204ENST00000589934 DDR1Q08345 913 aa16.67■□□□□ 0.26
APBA3-204ENST00000589934 PARP10Q53GL7 1025 aa16.67■□□□□ 0.26
APBA3-204ENST00000589934 PCCAP05165 728 aaPredicted RBP16.66■□□□□ 0.26
APBA3-204ENST00000589934 SYNE4Q8N205 404 aa16.66■□□□□ 0.26
APBA3-204ENST00000589934 NLGN1Q8N2Q7 840 aa16.66■□□□□ 0.26
APBA3-204ENST00000589934 ZBTB38Q8NAP3 1195 aaPredicted RBP16.66■□□□□ 0.26
APBA3-204ENST00000589934 AFDNP55196 1824 aaKnown RBP16.66■□□□□ 0.26
APBA3-204ENST00000589934 POLRMTO00411 1230 aaKnown RBP16.65■□□□□ 0.26
APBA3-204ENST00000589934 SLC16A10Q8TF71 515 aa16.65■□□□□ 0.26
APBA3-204ENST00000589934 GNAI3P08754 354 aa16.64■□□□□ 0.25
APBA3-204ENST00000589934 AAMPQ13685 434 aa16.64■□□□□ 0.25
APBA3-204ENST00000589934 R3HDM1Q15032 1099 aaKnown RBP16.64■□□□□ 0.25
APBA3-204ENST00000589934 SLC10A5Q5PT55 438 aa16.64■□□□□ 0.25
APBA3-204ENST00000589934 ERICH6BQ5W0A0 696 aa16.64■□□□□ 0.25
APBA3-204ENST00000589934 JARID2Q92833 1246 aaPredicted RBP16.64■□□□□ 0.25
APBA3-204ENST00000589934 FAM89AQ96GI7 184 aa16.64■□□□□ 0.25
APBA3-204ENST00000589934 SETDB2Q96T68 719 aa16.64■□□□□ 0.25
APBA3-204ENST00000589934 PCDHB15Q9Y5E8 787 aa16.64■□□□□ 0.25
APBA3-204ENST00000589934 CDHR2Q9BYE9 1310 aa16.64■□□□□ 0.25
APBA3-204ENST00000589934 NRXN2Q9P2S2 1712 aa16.63■□□□□ 0.25
APBA3-204ENST00000589934 EPHA10Q5JZY3 1008 aa16.63■□□□□ 0.25
APBA3-204ENST00000589934 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
APBA3-204ENST00000589934 UBE3BQ7Z3V4 1068 aa16.63■□□□□ 0.25
APBA3-204ENST00000589934 SUCLG2Q96I99 432 aa16.63■□□□□ 0.25
APBA3-204ENST00000589934 UTP14AQ9BVJ6 771 aaKnown RBP16.63■□□□□ 0.25
APBA3-204ENST00000589934 PLA2G12BQ9BX93 195 aa16.63■□□□□ 0.25
APBA3-204ENST00000589934 C9orf78Q9NZ63 289 aaPredicted RBP16.63■□□□□ 0.25
APBA3-204ENST00000589934 CARMIL3Q8ND23 1372 aa16.63■□□□□ 0.25
APBA3-204ENST00000589934 SOCS7O14512 581 aa16.62■□□□□ 0.25
APBA3-204ENST00000589934 MSH5O43196 834 aa16.62■□□□□ 0.25
APBA3-204ENST00000589934 FOXO4P98177 505 aa16.62■□□□□ 0.25
APBA3-204ENST00000589934 RABL6Q3YEC7 729 aaPredicted RBP16.62■□□□□ 0.25
APBA3-204ENST00000589934 PPP1R42Q7Z4L9 355 aa16.62■□□□□ 0.25
APBA3-204ENST00000589934 SIRT2Q8IXJ6 389 aa16.62■□□□□ 0.25
APBA3-204ENST00000589934 ANKRD44Q8N8A2 993 aa16.62■□□□□ 0.25
APBA3-204ENST00000589934 UBTFL1P0CB47 393 aaPredicted RBP16.61■□□□□ 0.25
APBA3-204ENST00000589934 MSL1Q68DK7 614 aa16.61■□□□□ 0.25
APBA3-204ENST00000589934 SGIP1Q9BQI5 828 aa16.61■□□□□ 0.25
APBA3-204ENST00000589934 CHMP4BQ9H444 224 aaKnown RBP16.61■□□□□ 0.25
APBA3-204ENST00000589934 C1orf115Q9H7X2 142 aa16.61■□□□□ 0.25
APBA3-204ENST00000589934 TRMT112Q9UI30 125 aaKnown RBP16.61■□□□□ 0.25
APBA3-204ENST00000589934 LRRFIP2Q9Y608 721 aaKnown RBP16.61■□□□□ 0.25
APBA3-204ENST00000589934 GNAI2P04899 355 aa16.6■□□□□ 0.25
APBA3-204ENST00000589934 SERPINB2P05120 415 aa16.6■□□□□ 0.25
APBA3-204ENST00000589934 NEFLP07196 543 aa16.6■□□□□ 0.25
APBA3-204ENST00000589934 MMP10P09238 476 aa16.6■□□□□ 0.25
APBA3-204ENST00000589934 MTX1Q13505 466 aa16.6■□□□□ 0.25
APBA3-204ENST00000589934 ERFEQ4G0M1 354 aa16.6■□□□□ 0.25
APBA3-204ENST00000589934 PRR5LQ6MZQ0 368 aa16.6■□□□□ 0.25
APBA3-204ENST00000589934 NUTM1Q86Y26 1132 aa16.6■□□□□ 0.25
APBA3-204ENST00000589934 SH3TC1Q8TE82 1336 aa16.6■□□□□ 0.25
APBA3-204ENST00000589934 ABCC12Q96J65 1359 aa16.6■□□□□ 0.25
APBA3-204ENST00000589934 PSDA5PKW4 1024 aaPredicted RBP16.59■□□□□ 0.25
APBA3-204ENST00000589934 IRS4O14654 1257 aaPredicted RBP16.59■□□□□ 0.25
APBA3-204ENST00000589934 CSF1RP07333 972 aa16.59■□□□□ 0.25
APBA3-204ENST00000589934 CEP85Q6P2H3 762 aa16.59■□□□□ 0.25
APBA3-204ENST00000589934 TPTE2Q6XPS3 522 aa16.59■□□□□ 0.25
APBA3-204ENST00000589934 NYXQ9GZU5 481 aa16.59■□□□□ 0.25
APBA3-204ENST00000589934 RIC1Q4ADV7 1423 aa16.59■□□□□ 0.25
APBA3-204ENST00000589934 DDX60Q8IY21 1712 aaKnown RBP16.59■□□□□ 0.25
APBA3-204ENST00000589934 FAM177BA6PVY3 158 aa16.58■□□□□ 0.24
APBA3-204ENST00000589934 RTL5Q5HYW3 569 aaPredicted RBP16.58■□□□□ 0.24
APBA3-204ENST00000589934 C3orf67Q6ZVT6 689 aa16.58■□□□□ 0.24
APBA3-204ENST00000589934 NBPF5PQ86XG9 351 aaPredicted RBP16.58■□□□□ 0.24
APBA3-204ENST00000589934 BICC1Q9H694 974 aaKnown RBP16.58■□□□□ 0.24
APBA3-204ENST00000589934 KLRG2A4D1S0 409 aaPredicted RBP16.57■□□□□ 0.24
APBA3-204ENST00000589934 HCLS1P14317 486 aaPredicted RBP16.57■□□□□ 0.24
APBA3-204ENST00000589934 ATP8B2P98198 1209 aa16.57■□□□□ 0.24
APBA3-204ENST00000589934 RPAP2Q8IXW5 612 aaPredicted RBP16.57■□□□□ 0.24
APBA3-204ENST00000589934 MTFR1LQ9H019 292 aa16.57■□□□□ 0.24
APBA3-204ENST00000589934 LAMB2P55268 1798 aa16.56■□□□□ 0.24
APBA3-204ENST00000589934 PNMA6EA0A0J9YXQ4 647 aa16.56■□□□□ 0.24
APBA3-204ENST00000589934 PDE8AO60658 829 aa16.56■□□□□ 0.24
APBA3-204ENST00000589934 ZBTB7AO95365 584 aa16.56■□□□□ 0.24
APBA3-204ENST00000589934 RFX5P48382 616 aaPredicted RBP16.56■□□□□ 0.24
APBA3-204ENST00000589934 POLA2Q14181 598 aa16.56■□□□□ 0.24
APBA3-204ENST00000589934 TTLL11Q8NHH1 800 aa16.56■□□□□ 0.24
APBA3-204ENST00000589934 PTGER2P43116 358 aa16.55■□□□□ 0.24
APBA3-204ENST00000589934 SF3B3Q15393 1217 aaKnown RBP16.55■□□□□ 0.24
APBA3-204ENST00000589934 CCDC24Q8N4L8 307 aa16.55■□□□□ 0.24
APBA3-204ENST00000589934 CNBD1Q8NA66 436 aa16.55■□□□□ 0.24
APBA3-204ENST00000589934 SSH3Q8TE77 659 aa16.55■□□□□ 0.24
APBA3-204ENST00000589934 HDAC5Q9UQL6 1122 aa16.55■□□□□ 0.24
APBA3-204ENST00000589934 TNRC6CQ9HCJ0 1690 aaKnown RBP16.54■□□□□ 0.24
APBA3-204ENST00000589934 IGHDP01880 384 aa16.54■□□□□ 0.24
APBA3-204ENST00000589934 CTSWP56202 376 aa16.54■□□□□ 0.24
APBA3-204ENST00000589934 HDAC1Q13547 482 aaPredicted RBP16.54■□□□□ 0.24
APBA3-204ENST00000589934 LMBR1LQ6UX01 489 aa16.54■□□□□ 0.24
APBA3-204ENST00000589934 GTF3C3Q9Y5Q9 886 aa16.54■□□□□ 0.24
APBA3-204ENST00000589934 PARP3Q9Y6F1 533 aa16.54■□□□□ 0.24
APBA3-204ENST00000589934 RTL9Q8NET4 1388 aa16.53■□□□□ 0.24
APBA3-204ENST00000589934 ANKRD31Q8N7Z5 1873 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms