RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 MVPQ14764 893 aaKnown RBP19.17■□□□□ 0.66
ATG4D-211ENST00000589753 PPP1R42Q7Z4L9 355 aa19.17■□□□□ 0.66
ATG4D-211ENST00000589753 COG6Q9Y2V7 657 aa19.17■□□□□ 0.66
ATG4D-211ENST00000589753 IBTKQ9P2D0 1353 aaPredicted RBP19.17■□□□□ 0.66
ATG4D-211ENST00000589753 ZBTB7AO95365 584 aa19.16■□□□□ 0.66
ATG4D-211ENST00000589753 SUSD4Q5VX71 490 aa19.16■□□□□ 0.66
ATG4D-211ENST00000589753 MTFR1LQ9H019 292 aa19.16■□□□□ 0.66
ATG4D-211ENST00000589753 COL24A1Q17RW2 1714 aa19.16■□□□□ 0.66
ATG4D-211ENST00000589753 FAM177BA6PVY3 158 aa19.15■□□□□ 0.66
ATG4D-211ENST00000589753 MMP10P09238 476 aa19.15■□□□□ 0.66
ATG4D-211ENST00000589753 UTP14AQ9BVJ6 771 aaKnown RBP19.15■□□□□ 0.66
ATG4D-211ENST00000589753 POLRMTO00411 1230 aaKnown RBP19.14■□□□□ 0.65
ATG4D-211ENST00000589753 DDR1Q08345 913 aa19.14■□□□□ 0.65
ATG4D-211ENST00000589753 NBPF5PQ86XG9 351 aaPredicted RBP19.14■□□□□ 0.65
ATG4D-211ENST00000589753 NYXQ9GZU5 481 aa19.14■□□□□ 0.65
ATG4D-211ENST00000589753 C9orf78Q9NZ63 289 aaPredicted RBP19.14■□□□□ 0.65
ATG4D-211ENST00000589753 TRMT112Q9UI30 125 aaKnown RBP19.14■□□□□ 0.65
ATG4D-211ENST00000589753 DDX19BQ9UMR2 479 aa19.14■□□□□ 0.65
ATG4D-211ENST00000589753 PARP3Q9Y6F1 533 aa19.14■□□□□ 0.65
ATG4D-211ENST00000589753 GRM8O00222 908 aa19.13■□□□□ 0.65
ATG4D-211ENST00000589753 NTSR2O95665 410 aa19.13■□□□□ 0.65
ATG4D-211ENST00000589753 SERPINB2P05120 415 aa19.13■□□□□ 0.65
ATG4D-211ENST00000589753 PCCAP05165 728 aaPredicted RBP19.13■□□□□ 0.65
ATG4D-211ENST00000589753 TPTE2Q6XPS3 522 aa19.13■□□□□ 0.65
ATG4D-211ENST00000589753 ZBTB38Q8NAP3 1195 aaPredicted RBP19.13■□□□□ 0.65
ATG4D-211ENST00000589753 USP44Q9H0E7 712 aa19.13■□□□□ 0.65
ATG4D-211ENST00000589753 ATF5Q9Y2D1 282 aaPredicted RBP19.13■□□□□ 0.65
ATG4D-211ENST00000589753 H7C1W4 665 aa19.12■□□□□ 0.65
ATG4D-211ENST00000589753 NPHP1O15259 732 aa19.12■□□□□ 0.65
ATG4D-211ENST00000589753 IRX6P78412 446 aaPredicted RBP19.12■□□□□ 0.65
ATG4D-211ENST00000589753 CRBNQ96SW2 442 aa19.12■□□□□ 0.65
ATG4D-211ENST00000589753 UTYO14607 1347 aa19.11■□□□□ 0.65
ATG4D-211ENST00000589753 SH3TC1Q8TE82 1336 aa19.11■□□□□ 0.65
ATG4D-211ENST00000589753 NBPF7P0C2Y1 421 aaPredicted RBP19.11■□□□□ 0.65
ATG4D-211ENST00000589753 GTF2E1P29083 439 aaPredicted RBP19.11■□□□□ 0.65
ATG4D-211ENST00000589753 UBE3BQ7Z3V4 1068 aa19.11■□□□□ 0.65
ATG4D-211ENST00000589753 CNBD1Q8NA66 436 aa19.11■□□□□ 0.65
ATG4D-211ENST00000589753 JARID2Q92833 1246 aaPredicted RBP19.11■□□□□ 0.65
ATG4D-211ENST00000589753 FAM89AQ96GI7 184 aa19.11■□□□□ 0.65
ATG4D-211ENST00000589753 MEIS3Q99687 375 aa19.11■□□□□ 0.65
ATG4D-211ENST00000589753 CHMP4BQ9H444 224 aaKnown RBP19.11■□□□□ 0.65
ATG4D-211ENST00000589753 ZBTB7BO15156 539 aaPredicted RBP19.1■□□□□ 0.65
ATG4D-211ENST00000589753 GNAI3P08754 354 aa19.1■□□□□ 0.65
ATG4D-211ENST00000589753 POLD1P28340 1107 aa19.1■□□□□ 0.65
ATG4D-211ENST00000589753 RTL5Q5HYW3 569 aaPredicted RBP19.1■□□□□ 0.65
ATG4D-211ENST00000589753 NUTM1Q86Y26 1132 aa19.1■□□□□ 0.65
ATG4D-211ENST00000589753 NRXN2Q9P2S2 1712 aa19.09■□□□□ 0.65
ATG4D-211ENST00000589753 CDHR2Q9BYE9 1310 aa19.09■□□□□ 0.65
ATG4D-211ENST00000589753 NEFLP07196 543 aa19.09■□□□□ 0.65
ATG4D-211ENST00000589753 UBTFL1P0CB47 393 aaPredicted RBP19.09■□□□□ 0.65
ATG4D-211ENST00000589753 CASP7P55210 303 aa19.09■□□□□ 0.65
ATG4D-211ENST00000589753 ERFEQ4G0M1 354 aa19.09■□□□□ 0.65
ATG4D-211ENST00000589753 PRR5LQ6MZQ0 368 aa19.09■□□□□ 0.65
ATG4D-211ENST00000589753 ST5P78524 1137 aa19.08■□□□□ 0.64
ATG4D-211ENST00000589753 SYNE4Q8N205 404 aa19.08■□□□□ 0.64
ATG4D-211ENST00000589753 HDAC5Q9UQL6 1122 aa19.08■□□□□ 0.64
ATG4D-211ENST00000589753 IRS4O14654 1257 aaPredicted RBP19.07■□□□□ 0.64
ATG4D-211ENST00000589753 EXOC6Q8TAG9 804 aa19.07■□□□□ 0.64
ATG4D-211ENST00000589753 SPON1Q9HCB6 807 aa19.07■□□□□ 0.64
ATG4D-211ENST00000589753 HSP90B1P14625 803 aaKnown RBP19.06■□□□□ 0.64
ATG4D-211ENST00000589753 SLC10A5Q5PT55 438 aa19.06■□□□□ 0.64
ATG4D-211ENST00000589753 CCDC24Q8N4L8 307 aa19.06■□□□□ 0.64
ATG4D-211ENST00000589753 SUCLG2Q96I99 432 aa19.06■□□□□ 0.64
ATG4D-211ENST00000589753 SGIP1Q9BQI5 828 aa19.06■□□□□ 0.64
ATG4D-211ENST00000589753 ZBTB40Q9NUA8 1239 aa19.06■□□□□ 0.64
ATG4D-211ENST00000589753 ABCC12Q96J65 1359 aa19.06■□□□□ 0.64
ATG4D-211ENST00000589753 GNAI2P04899 355 aa19.05■□□□□ 0.64
ATG4D-211ENST00000589753 HCLS1P14317 486 aaPredicted RBP19.05■□□□□ 0.64
ATG4D-211ENST00000589753 PTGER2P43116 358 aa19.05■□□□□ 0.64
ATG4D-211ENST00000589753 LAMB2P55268 1798 aa19.04■□□□□ 0.64
ATG4D-211ENST00000589753 PDE8AO60658 829 aa19.04■□□□□ 0.64
ATG4D-211ENST00000589753 RIC1Q4ADV7 1423 aa19.04■□□□□ 0.64
ATG4D-211ENST00000589753 DDX60Q8IY21 1712 aaKnown RBP19.04■□□□□ 0.64
ATG4D-211ENST00000589753 PLA2G12BQ9BX93 195 aa19.04■□□□□ 0.64
ATG4D-211ENST00000589753 LRRFIP2Q9Y608 721 aaKnown RBP19.04■□□□□ 0.64
ATG4D-211ENST00000589753 KAZALD1Q96I82 304 aa19.03■□□□□ 0.64
ATG4D-211ENST00000589753 C1orf115Q9H7X2 142 aa19.03■□□□□ 0.64
ATG4D-211ENST00000589753 AAMPQ13685 434 aa19.02■□□□□ 0.64
ATG4D-211ENST00000589753 NLRP3Q96P20 1036 aa19.02■□□□□ 0.64
ATG4D-211ENST00000589753 BRIP1Q9BX63 1249 aa19.02■□□□□ 0.64
ATG4D-211ENST00000589753 BICC1Q9H694 974 aaKnown RBP19.02■□□□□ 0.64
ATG4D-211ENST00000589753 C10orf71Q711Q0 1435 aa19.01■□□□□ 0.63
ATG4D-211ENST00000589753 CTSWP56202 376 aa19.01■□□□□ 0.63
ATG4D-211ENST00000589753 FOXO4P98177 505 aa19.01■□□□□ 0.63
ATG4D-211ENST00000589753 EPHA10Q5JZY3 1008 aa19.01■□□□□ 0.63
ATG4D-211ENST00000589753 TNRC6CQ9HCJ0 1690 aaKnown RBP19.01■□□□□ 0.63
ATG4D-211ENST00000589753 ANKRD44Q8N8A2 993 aa19■□□□□ 0.63
ATG4D-211ENST00000589753 ANKRD31Q8N7Z5 1873 aa18.99■□□□□ 0.63
ATG4D-211ENST00000589753 PDE6BP35913 854 aa18.99■□□□□ 0.63
ATG4D-211ENST00000589753 RABL6Q3YEC7 729 aaPredicted RBP18.99■□□□□ 0.63
ATG4D-211ENST00000589753 LMBR1LQ6UX01 489 aa18.99■□□□□ 0.63
ATG4D-211ENST00000589753 C3orf67Q6ZVT6 689 aa18.99■□□□□ 0.63
ATG4D-211ENST00000589753 TTLL11Q8NHH1 800 aa18.99■□□□□ 0.63
ATG4D-211ENST00000589753 MYH3P11055 1940 aa18.98■□□□□ 0.63
ATG4D-211ENST00000589753 CSF1RP07333 972 aa18.98■□□□□ 0.63
ATG4D-211ENST00000589753 SF3B3Q15393 1217 aaKnown RBP18.98■□□□□ 0.63
ATG4D-211ENST00000589753 CCDC152Q4G0S7 254 aa18.98■□□□□ 0.63
ATG4D-211ENST00000589753 KLRG2A4D1S0 409 aaPredicted RBP18.97■□□□□ 0.63
ATG4D-211ENST00000589753 CCDC85AQ96PX6 553 aaPredicted RBP18.97■□□□□ 0.63
ATG4D-211ENST00000589753 CHMP3Q9Y3E7 222 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms