RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 USHBP1Q8N6Y0 703 aa7.32□□□□□ -1.24
SDF2-206ENST00000587788 PLEKHF1Q96S99 279 aa7.32□□□□□ -1.24
SDF2-206ENST00000587788 NOP58Q9Y2X3 529 aaKnown RBP7.32□□□□□ -1.24
SDF2-206ENST00000587788 OVOS2A0A0G2JMS6 1433 aa7.32□□□□□ -1.24
SDF2-206ENST00000587788 NCAPD2Q15021 1401 aa7.32□□□□□ -1.24
SDF2-206ENST00000587788 BCAR3O75815 825 aa7.31□□□□□ -1.24
SDF2-206ENST00000587788 TMPOP42166 694 aaKnown RBP7.31□□□□□ -1.24
SDF2-206ENST00000587788 DIXDC1Q155Q3 683 aa7.31□□□□□ -1.24
SDF2-206ENST00000587788 NBPF6Q5VWK0 638 aa7.31□□□□□ -1.24
SDF2-206ENST00000587788 DEFB132Q7Z7B7 95 aa7.31□□□□□ -1.24
SDF2-206ENST00000587788 ZNF687Q8N1G0 1237 aa7.31□□□□□ -1.24
SDF2-206ENST00000587788 MARCH10Q8NA82 808 aaPredicted RBP7.31□□□□□ -1.24
SDF2-206ENST00000587788 NBPF4Q96M43 638 aa7.31□□□□□ -1.24
SDF2-206ENST00000587788 LY75O60449 1722 aa7.3□□□□□ -1.24
SDF2-206ENST00000587788 TUBGCP6Q96RT7 1819 aa7.3□□□□□ -1.24
SDF2-206ENST00000587788 IPO8O15397 1037 aaKnown RBP7.3□□□□□ -1.24
SDF2-206ENST00000587788 TRIM37O94972 964 aa7.3□□□□□ -1.24
SDF2-206ENST00000587788 CLK2P49760 499 aaKnown RBP7.3□□□□□ -1.24
SDF2-206ENST00000587788 FLIIQ13045 1269 aa7.3□□□□□ -1.24
SDF2-206ENST00000587788 EIF4A2Q14240 407 aaKnown RBP7.3□□□□□ -1.24
SDF2-206ENST00000587788 DDB1Q16531 1140 aa7.3□□□□□ -1.24
SDF2-206ENST00000587788 TUSC1Q2TAM9 212 aa7.3□□□□□ -1.24
SDF2-206ENST00000587788 LCE2DQ5TA82 110 aaPredicted RBP7.3□□□□□ -1.24
SDF2-206ENST00000587788 PTF1AQ7RTS3 328 aa7.3□□□□□ -1.24
SDF2-206ENST00000587788 PROCA1Q8NCQ7 364 aaPredicted RBP7.3□□□□□ -1.24
SDF2-206ENST00000587788 SPIRE2Q8WWL2 714 aa7.3□□□□□ -1.24
SDF2-206ENST00000587788 MARVELD3Q96A59 401 aa7.3□□□□□ -1.24
SDF2-206ENST00000587788 CLUAP1Q96AJ1 413 aa7.3□□□□□ -1.24
SDF2-206ENST00000587788 CHMP4BQ9H444 224 aaKnown RBP7.3□□□□□ -1.24
SDF2-206ENST00000587788 SCN11AQ9UI33 1791 aa7.29□□□□□ -1.24
SDF2-206ENST00000587788 POTEB3A0JP26 581 aa7.29□□□□□ -1.24
SDF2-206ENST00000587788 HTATSF1O43719 755 aaKnown RBP7.29□□□□□ -1.24
SDF2-206ENST00000587788 IL2RBP14784 551 aa7.29□□□□□ -1.24
SDF2-206ENST00000587788 GJA5P36382 358 aa7.29□□□□□ -1.24
SDF2-206ENST00000587788 RIPK4P57078 832 aa7.29□□□□□ -1.24
SDF2-206ENST00000587788 LMOD3Q0VAK6 560 aa7.29□□□□□ -1.24
SDF2-206ENST00000587788 ALDH1L2Q3SY69 923 aa7.29□□□□□ -1.24
SDF2-206ENST00000587788 ZKSCAN2Q63HK3 967 aa7.29□□□□□ -1.24
SDF2-206ENST00000587788 POTEBQ6S5H4 581 aa7.29□□□□□ -1.24
SDF2-206ENST00000587788 FAM196AQ6ZSG2 479 aa7.29□□□□□ -1.24
SDF2-206ENST00000587788 VPS9D1Q9Y2B5 631 aa7.29□□□□□ -1.24
SDF2-206ENST00000587788 RRP7AQ9Y3A4 280 aaKnown RBP7.29□□□□□ -1.24
SDF2-206ENST00000587788 TAF1LQ8IZX4 1826 aa7.29□□□□□ -1.24
SDF2-206ENST00000587788 BCL9O00512 1426 aa7.28□□□□□ -1.24
SDF2-206ENST00000587788 DDX11L8A8MPP1 907 aa7.28□□□□□ -1.24
SDF2-206ENST00000587788 SPTLC1O15269 473 aa7.28□□□□□ -1.24
SDF2-206ENST00000587788 SULT6B1Q6IMI4 303 aa7.28□□□□□ -1.24
SDF2-206ENST00000587788 CCDC125Q86Z20 511 aa7.28□□□□□ -1.24
SDF2-206ENST00000587788 CDCA7Q9BWT1 371 aaPredicted RBP7.28□□□□□ -1.24
SDF2-206ENST00000587788 RWDD1Q9H446 243 aaPredicted RBP7.28□□□□□ -1.24
SDF2-206ENST00000587788 POLR3EQ9NVU0 708 aa7.28□□□□□ -1.24
SDF2-206ENST00000587788 KIF16BQ96L93 1317 aa7.27□□□□□ -1.24
SDF2-206ENST00000587788 PAPPAQ13219 1627 aa7.27□□□□□ -1.25
SDF2-206ENST00000587788 FAM205CA6NFA0 338 aa7.27□□□□□ -1.25
SDF2-206ENST00000587788 BHMG1C9JSJ3 638 aaPredicted RBP7.27□□□□□ -1.25
SDF2-206ENST00000587788 EXOC5O00471 708 aa7.27□□□□□ -1.25
SDF2-206ENST00000587788 PRKAR2BP31323 418 aa7.27□□□□□ -1.25
SDF2-206ENST00000587788 MCM6Q14566 821 aa7.27□□□□□ -1.25
SDF2-206ENST00000587788 NFE2L2Q16236 605 aa7.27□□□□□ -1.25
SDF2-206ENST00000587788 AMOTQ4VCS5 1084 aa7.27□□□□□ -1.25
SDF2-206ENST00000587788 RSBN1LQ6PCB5 846 aaPredicted RBP7.27□□□□□ -1.25
SDF2-206ENST00000587788 DZIP1LQ8IYY4 767 aaKnown RBP7.27□□□□□ -1.25
SDF2-206ENST00000587788 FRAT1Q92837 279 aaPredicted RBP7.27□□□□□ -1.25
SDF2-206ENST00000587788 ZMYND15Q9H091 742 aa7.27□□□□□ -1.25
SDF2-206ENST00000587788 LIMD1Q9UGP4 676 aa7.27□□□□□ -1.25
SDF2-206ENST00000587788 SEPT9Q9UHD8 586 aaPredicted RBP7.27□□□□□ -1.25
SDF2-206ENST00000587788 DLG5Q8TDM6 1919 aa7.27□□□□□ -1.25
SDF2-206ENST00000587788 CASZ1Q86V15 1759 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 C5P01031 1676 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 TK2O00142 265 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 KCNQ2O43526 872 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 HMOX1P09601 288 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 GNAI1P63096 354 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 MVPQ14764 893 aaKnown RBP7.26□□□□□ -1.25
SDF2-206ENST00000587788 EZH2Q15910 746 aaKnown RBP7.26□□□□□ -1.25
SDF2-206ENST00000587788 SWT1Q5T5J6 900 aaKnown RBP7.26□□□□□ -1.25
SDF2-206ENST00000587788 PPP2R2DQ66LE6 453 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 LAPTM4BQ86VI4 370 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 FTSJ3Q8IY81 847 aaKnown RBP7.26□□□□□ -1.25
SDF2-206ENST00000587788 GAS2L2Q8NHY3 880 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 ACSBG1Q96GR2 724 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 HS3ST6Q96QI5 342 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 DDX19BQ9UMR2 479 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 COG6Q9Y2V7 657 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 IGSF1Q8N6C5 1336 aa7.26□□□□□ -1.25
SDF2-206ENST00000587788 QSER1Q2KHR3 1735 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 APBA3O96018 575 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 SLC10A3P09131 477 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 BAG6P46379 1132 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 GCGRP47871 477 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 EXOSC9Q06265 439 aaKnown RBP7.25□□□□□ -1.25
SDF2-206ENST00000587788 SF3B2Q13435 895 aaKnown RBP7.25□□□□□ -1.25
SDF2-206ENST00000587788 PLEKHO1Q53GL0 409 aaPredicted RBP7.25□□□□□ -1.25
SDF2-206ENST00000587788 RIC3Q7Z5B4 369 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 AEBP1Q8IUX7 1158 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 DDX54Q8TDD1 881 aaKnown RBP7.25□□□□□ -1.25
SDF2-206ENST00000587788 PANK1Q8TE04 598 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 RTF1Q92541 710 aaKnown RBP7.25□□□□□ -1.25
SDF2-206ENST00000587788 ARHGAP45Q92619 1136 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 PHACTR3Q96KR7 559 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms