RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ST18O60284 1047 aa12.44□□□□□ -0.42
RFFL-212ENST00000584655 MCCP23508 829 aa12.44□□□□□ -0.42
RFFL-212ENST00000584655 NMIQ13287 307 aaPredicted RBP12.44□□□□□ -0.42
RFFL-212ENST00000584655 ESYT1Q9BSJ8 1104 aa12.44□□□□□ -0.42
RFFL-212ENST00000584655 ATG3Q9NT62 314 aa12.44□□□□□ -0.42
RFFL-212ENST00000584655 GUCY1B3Q02153 619 aa12.44□□□□□ -0.42
RFFL-212ENST00000584655 CCDC83Q8IWF9 413 aa12.44□□□□□ -0.42
RFFL-212ENST00000584655 SEC31BQ9NQW1 1179 aa12.44□□□□□ -0.42
RFFL-212ENST00000584655 ECHDC1Q9NTX5 307 aa12.44□□□□□ -0.42
RFFL-212ENST00000584655 PIK3C2AO00443 1686 aa12.43□□□□□ -0.42
RFFL-212ENST00000584655 K7ELQ4 463 aaPredicted RBP12.43□□□□□ -0.42
RFFL-212ENST00000584655 PRPF40AO75400 957 aaKnown RBP12.43□□□□□ -0.42
RFFL-212ENST00000584655 NIP7Q9Y221 180 aaKnown RBP eCLIP12.43□□□□□ -0.42
RFFL-212ENST00000584655 A0A0G2JLW4 131 aa12.43□□□□□ -0.42
RFFL-212ENST00000584655 AAMPQ13685 434 aa12.43□□□□□ -0.42
RFFL-212ENST00000584655 RNF214Q8ND24 703 aa12.43□□□□□ -0.42
RFFL-212ENST00000584655 PIBF1Q8WXW3 757 aa12.43□□□□□ -0.42
RFFL-212ENST00000584655 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
RFFL-212ENST00000584655 RGS12O14924 1447 aa12.43□□□□□ -0.42
RFFL-212ENST00000584655 RRP12Q5JTH9 1297 aaKnown RBP12.43□□□□□ -0.42
RFFL-212ENST00000584655 ILDR1Q86SU0 546 aaPredicted RBP12.43□□□□□ -0.42
RFFL-212ENST00000584655 TNPO1Q92973 898 aaKnown RBP12.43□□□□□ -0.42
RFFL-212ENST00000584655 KLHL34Q8N239 644 aa12.42□□□□□ -0.42
RFFL-212ENST00000584655 SSH3Q8TE77 659 aa12.42□□□□□ -0.42
RFFL-212ENST00000584655 CEP126Q9P2H0 1117 aa12.42□□□□□ -0.42
RFFL-212ENST00000584655 GSE1Q14687 1217 aa12.42□□□□□ -0.42
RFFL-212ENST00000584655 ADCK5Q3MIX3 580 aa12.42□□□□□ -0.42
RFFL-212ENST00000584655 FBXO41Q8TF61 875 aa12.42□□□□□ -0.42
RFFL-212ENST00000584655 DDX49Q9Y6V7 483 aaKnown RBP12.42□□□□□ -0.42
RFFL-212ENST00000584655 TNS3Q68CZ2 1445 aa12.42□□□□□ -0.42
RFFL-212ENST00000584655 A0A0D9SFI3 127 aa12.42□□□□□ -0.42
RFFL-212ENST00000584655 CCDC144CPQ8IYA2 1237 aa12.42□□□□□ -0.42
RFFL-212ENST00000584655 ATP10DQ9P241 1426 aa12.42□□□□□ -0.42
RFFL-212ENST00000584655 CARD10Q9BWT7 1032 aa12.41□□□□□ -0.42
RFFL-212ENST00000584655 GREM2Q9H772 168 aa12.41□□□□□ -0.42
RFFL-212ENST00000584655 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
RFFL-212ENST00000584655 DBNLQ9UJU6 430 aaKnown RBP12.41□□□□□ -0.42
RFFL-212ENST00000584655 KDM6AO15550 1401 aaPredicted RBP12.41□□□□□ -0.42
RFFL-212ENST00000584655 CHAF1AQ13111 956 aaPredicted RBP12.41□□□□□ -0.42
RFFL-212ENST00000584655 SLC4A9Q96Q91 983 aa12.41□□□□□ -0.42
RFFL-212ENST00000584655 CHMP5Q9NZZ3 219 aa12.41□□□□□ -0.42
RFFL-212ENST00000584655 SETD1AO15047 1707 aaKnown RBP12.41□□□□□ -0.42
RFFL-212ENST00000584655 NRKQ7Z2Y5 1582 aa12.41□□□□□ -0.42
RFFL-212ENST00000584655 RXRAP19793 462 aa12.41□□□□□ -0.42
RFFL-212ENST00000584655 CCT2P78371 535 aaKnown RBP12.41□□□□□ -0.42
RFFL-212ENST00000584655 TTLL5Q6EMB2 1281 aa12.41□□□□□ -0.42
RFFL-212ENST00000584655 ZNF589Q86UQ0 364 aaPredicted RBP12.41□□□□□ -0.42
RFFL-212ENST00000584655 GPR101Q96P66 508 aaPredicted RBP12.41□□□□□ -0.42
RFFL-212ENST00000584655 IFIT5Q13325 482 aaKnown RBP12.4□□□□□ -0.42
RFFL-212ENST00000584655 IRS4O14654 1257 aaPredicted RBP12.4□□□□□ -0.42
RFFL-212ENST00000584655 IFIT1P09914 478 aaKnown RBP12.4□□□□□ -0.42
RFFL-212ENST00000584655 TTC39AQ5SRH9 613 aa12.4□□□□□ -0.42
RFFL-212ENST00000584655 MPHOSPH8Q99549 860 aa12.4□□□□□ -0.42
RFFL-212ENST00000584655 KIF2CQ99661 725 aa12.4□□□□□ -0.42
RFFL-212ENST00000584655 PCNTO95613 3336 aa12.4□□□□□ -0.42
RFFL-212ENST00000584655 ADGRB2O60241 1585 aa12.4□□□□□ -0.43
RFFL-212ENST00000584655 FIBPO43427 364 aa12.4□□□□□ -0.43
RFFL-212ENST00000584655 TRAK2O60296 914 aa12.4□□□□□ -0.43
RFFL-212ENST00000584655 VPS53Q5VIR6 699 aa12.4□□□□□ -0.43
RFFL-212ENST00000584655 MARCH10Q8NA82 808 aaPredicted RBP12.4□□□□□ -0.43
RFFL-212ENST00000584655 PPP1R1BQ9UD71 204 aaPredicted RBP12.4□□□□□ -0.43
RFFL-212ENST00000584655 USP21Q9UK80 565 aa12.4□□□□□ -0.43
RFFL-212ENST00000584655 GLRX3O76003 335 aaKnown RBP12.39□□□□□ -0.43
RFFL-212ENST00000584655 CAVIN1Q6NZI2 390 aaKnown RBP12.39□□□□□ -0.43
RFFL-212ENST00000584655 DLG5Q8TDM6 1919 aa12.39□□□□□ -0.43
RFFL-212ENST00000584655 CEMIPQ8WUJ3 1361 aa12.39□□□□□ -0.43
RFFL-212ENST00000584655 ADAMTSL3P82987 1691 aa12.39□□□□□ -0.43
RFFL-212ENST00000584655 GNPATO15228 680 aa12.39□□□□□ -0.43
RFFL-212ENST00000584655 PANK2Q9BZ23 570 aa12.39□□□□□ -0.43
RFFL-212ENST00000584655 NALCNQ8IZF0 1738 aa12.39□□□□□ -0.43
RFFL-212ENST00000584655 A0A1B0GUL7 405 aa12.39□□□□□ -0.43
RFFL-212ENST00000584655 BRPF1P55201 1214 aaPredicted RBP12.39□□□□□ -0.43
RFFL-212ENST00000584655 TMX3Q96JJ7 454 aa12.39□□□□□ -0.43
RFFL-212ENST00000584655 ITGA6P23229 1130 aa12.38□□□□□ -0.43
RFFL-212ENST00000584655 VPS37DQ86XT2 251 aa12.38□□□□□ -0.43
RFFL-212ENST00000584655 MIGA1Q8NAN2 632 aa12.38□□□□□ -0.43
RFFL-212ENST00000584655 PLBD2Q8NHP8 589 aa12.38□□□□□ -0.43
RFFL-212ENST00000584655 INCENPQ9NQS7 918 aa12.38□□□□□ -0.43
RFFL-212ENST00000584655 PRKCSHP14314 528 aaPredicted RBP12.38□□□□□ -0.43
RFFL-212ENST00000584655 PTPN12Q05209 780 aaKnown RBP12.38□□□□□ -0.43
RFFL-212ENST00000584655 IBTKQ9P2D0 1353 aaPredicted RBP12.38□□□□□ -0.43
RFFL-212ENST00000584655 MCM4P33991 863 aa12.38□□□□□ -0.43
RFFL-212ENST00000584655 ISY1Q9ULR0 285 aaKnown RBP12.38□□□□□ -0.43
RFFL-212ENST00000584655 HSP90AB4PQ58FF6 505 aa12.37□□□□□ -0.43
RFFL-212ENST00000584655 MSL1Q68DK7 614 aa12.37□□□□□ -0.43
RFFL-212ENST00000584655 RAB11FIP3O75154 756 aa12.37□□□□□ -0.43
RFFL-212ENST00000584655 SCARF1Q14162 830 aa12.37□□□□□ -0.43
RFFL-212ENST00000584655 BCL11BQ9C0K0 894 aaPredicted RBP12.37□□□□□ -0.43
RFFL-212ENST00000584655 GPHNQ9NQX3 736 aaPredicted RBP12.37□□□□□ -0.43
RFFL-212ENST00000584655 RBM8AQ9Y5S9 174 aaKnown RBP12.37□□□□□ -0.43
RFFL-212ENST00000584655 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
RFFL-212ENST00000584655 LOC102724428A0A0B4J2F2 783 aa12.37□□□□□ -0.43
RFFL-212ENST00000584655 SIK1P57059 783 aa12.37□□□□□ -0.43
RFFL-212ENST00000584655 TNNI3KQ59H18 835 aa12.37□□□□□ -0.43
RFFL-212ENST00000584655 PI4K2BQ8TCG2 481 aa12.37□□□□□ -0.43
RFFL-212ENST00000584655 FPGT-TNNI3KV9GXZ4 949 aa12.37□□□□□ -0.43
RFFL-212ENST00000584655 CRKLP46109 303 aaKnown RBP12.36□□□□□ -0.43
RFFL-212ENST00000584655 RGPD2P0DJD1 1756 aa12.36□□□□□ -0.43
RFFL-212ENST00000584655 ALDH1L1O75891 902 aa12.36□□□□□ -0.43
RFFL-212ENST00000584655 LARGE1O95461 756 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms