RNA–Protein interactions for RNA: ENST00000584025.1

ITGB4-210, Transcript of integrin subunit beta 4, humanhuman

TSL 5

Gene ITGB4, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-210ENST00000584025 SLX4Q8IY92 1834 aa19.7■□□□□ 0.74
ITGB4-210ENST00000584025 NTSR2O95665 410 aa19.7■□□□□ 0.74
ITGB4-210ENST00000584025 FLIIQ13045 1269 aa19.7■□□□□ 0.74
ITGB4-210ENST00000584025 ERFEQ4G0M1 354 aa19.7■□□□□ 0.74
ITGB4-210ENST00000584025 KSR2Q6VAB6 950 aa19.7■□□□□ 0.74
ITGB4-210ENST00000584025 MYD88Q99836 296 aa19.7■□□□□ 0.74
ITGB4-210ENST00000584025 ISCA1Q9BUE6 129 aa19.7■□□□□ 0.74
ITGB4-210ENST00000584025 MAP3K2Q9Y2U5 619 aa19.7■□□□□ 0.74
ITGB4-210ENST00000584025 ABCC12Q96J65 1359 aa19.7■□□□□ 0.74
ITGB4-210ENST00000584025 MYH3P11055 1940 aa19.69■□□□□ 0.74
ITGB4-210ENST00000584025 PI4KAP2A4QPH2 592 aa19.69■□□□□ 0.74
ITGB4-210ENST00000584025 GRIN3BO60391 1043 aa19.69■□□□□ 0.74
ITGB4-210ENST00000584025 FKBP5Q13451 457 aaPredicted RBP19.69■□□□□ 0.74
ITGB4-210ENST00000584025 PI4KAP1Q8N8J0 262 aa19.69■□□□□ 0.74
ITGB4-210ENST00000584025 ZNF622Q969S3 477 aaKnown RBP eCLIP19.69■□□□□ 0.74
ITGB4-210ENST00000584025 ZNF428Q96B54 188 aa19.69■□□□□ 0.74
ITGB4-210ENST00000584025 DALRD3Q5D0E6 543 aaKnown RBP19.68■□□□□ 0.74
ITGB4-210ENST00000584025 METTL22Q9BUU2 404 aaPredicted RBP19.68■□□□□ 0.74
ITGB4-210ENST00000584025 TRMT112Q9UI30 125 aaKnown RBP19.68■□□□□ 0.74
ITGB4-210ENST00000584025 ADCY9O60503 1353 aa19.68■□□□□ 0.74
ITGB4-210ENST00000584025 RNF123Q5XPI4 1314 aa19.67■□□□□ 0.74
ITGB4-210ENST00000584025 ZBED9Q6R2W3 1325 aa19.67■□□□□ 0.74
ITGB4-210ENST00000584025 TAF1P21675 1872 aa19.67■□□□□ 0.74
ITGB4-210ENST00000584025 NEXNQ0ZGT2 675 aa19.66■□□□□ 0.74
ITGB4-210ENST00000584025 TRIM28Q13263 835 aaKnown RBP19.66■□□□□ 0.74
ITGB4-210ENST00000584025 TTLL6Q8N841 843 aa19.66■□□□□ 0.74
ITGB4-210ENST00000584025 RIC1Q4ADV7 1423 aa19.66■□□□□ 0.74
ITGB4-210ENST00000584025 SBF1O95248 1867 aa19.65■□□□□ 0.74
ITGB4-210ENST00000584025 SRGNP10124 158 aa19.65■□□□□ 0.74
ITGB4-210ENST00000584025 STYK1Q6J9G0 422 aa19.65■□□□□ 0.74
ITGB4-210ENST00000584025 MASTLQ96GX5 879 aa19.65■□□□□ 0.74
ITGB4-210ENST00000584025 SH3TC1Q8TE82 1336 aa19.65■□□□□ 0.74
ITGB4-210ENST00000584025 NPR1P16066 1061 aa19.64■□□□□ 0.73
ITGB4-210ENST00000584025 DNAAF4Q8WXU2 420 aa19.64■□□□□ 0.73
ITGB4-210ENST00000584025 SSH1Q8WYL5 1049 aa19.64■□□□□ 0.73
ITGB4-210ENST00000584025 KLRG2A4D1S0 409 aaPredicted RBP19.63■□□□□ 0.73
ITGB4-210ENST00000584025 CT47B1P0C2W7 299 aaPredicted RBP19.63■□□□□ 0.73
ITGB4-210ENST00000584025 RTL5Q5HYW3 569 aaPredicted RBP19.63■□□□□ 0.73
ITGB4-210ENST00000584025 SLC10A5Q5PT55 438 aa19.63■□□□□ 0.73
ITGB4-210ENST00000584025 SYNE4Q8N205 404 aa19.63■□□□□ 0.73
ITGB4-210ENST00000584025 MRPL50Q8N5N7 158 aaKnown RBP19.63■□□□□ 0.73
ITGB4-210ENST00000584025 CCDC191Q8NCU4 936 aa19.63■□□□□ 0.73
ITGB4-210ENST00000584025 CNKSR1Q969H4 720 aa19.63■□□□□ 0.73
ITGB4-210ENST00000584025 FAM89AQ96GI7 184 aa19.63■□□□□ 0.73
ITGB4-210ENST00000584025 NLRP3Q96P20 1036 aa19.63■□□□□ 0.73
ITGB4-210ENST00000584025 BCL2L13Q9BXK5 485 aa19.63■□□□□ 0.73
ITGB4-210ENST00000584025 CWC25Q9NXE8 425 aaPredicted RBP19.63■□□□□ 0.73
ITGB4-210ENST00000584025 FER1L6Q2WGJ9 1857 aa19.62■□□□□ 0.73
ITGB4-210ENST00000584025 HCLS1P14317 486 aaPredicted RBP19.62■□□□□ 0.73
ITGB4-210ENST00000584025 ALDH1L2Q3SY69 923 aa19.62■□□□□ 0.73
ITGB4-210ENST00000584025 RPGRQ92834 1020 aaKnown RBP19.62■□□□□ 0.73
ITGB4-210ENST00000584025 SMC4Q9NTJ3 1288 aa19.62■□□□□ 0.73
ITGB4-210ENST00000584025 IGKV5-2P06315 115 aa19.61■□□□□ 0.73
ITGB4-210ENST00000584025 ARHGAP27Q6ZUM4 889 aa19.61■□□□□ 0.73
ITGB4-210ENST00000584025 F6X3S4 739 aa19.6■□□□□ 0.73
ITGB4-210ENST00000584025 CWF19L2Q2TBE0 894 aaKnown RBP19.6■□□□□ 0.73
ITGB4-210ENST00000584025 CRY2Q49AN0 593 aa19.6■□□□□ 0.73
ITGB4-210ENST00000584025 C3orf67Q6ZVT6 689 aa19.6■□□□□ 0.73
ITGB4-210ENST00000584025 ZBTB38Q8NAP3 1195 aaPredicted RBP19.6■□□□□ 0.73
ITGB4-210ENST00000584025 ZNF219Q9P2Y4 722 aaPredicted RBP19.6■□□□□ 0.73
ITGB4-210ENST00000584025 NEURL1BA8MQ27 555 aa19.59■□□□□ 0.73
ITGB4-210ENST00000584025 PCCAP05165 728 aaPredicted RBP19.59■□□□□ 0.73
ITGB4-210ENST00000584025 ALDH1B1P30837 517 aa19.59■□□□□ 0.73
ITGB4-210ENST00000584025 PRPF40BQ6NWY9 871 aaKnown RBP19.59■□□□□ 0.73
ITGB4-210ENST00000584025 JARID2Q92833 1246 aaPredicted RBP19.59■□□□□ 0.73
ITGB4-210ENST00000584025 IRS4O14654 1257 aaPredicted RBP19.58■□□□□ 0.72
ITGB4-210ENST00000584025 LINS1Q8NG48 757 aa19.58■□□□□ 0.72
ITGB4-210ENST00000584025 RBM17Q96I25 401 aaKnown RBP19.58■□□□□ 0.72
ITGB4-210ENST00000584025 DICER1Q9UPY3 1922 aaKnown RBP19.58■□□□□ 0.72
ITGB4-210ENST00000584025 SPEF2Q9C093 1822 aa19.58■□□□□ 0.72
ITGB4-210ENST00000584025 C21orf2O43822 256 aa19.57■□□□□ 0.72
ITGB4-210ENST00000584025 SLC4A10Q6U841 1118 aa19.57■□□□□ 0.72
ITGB4-210ENST00000584025 PTPRCP08575 1304 aa19.56■□□□□ 0.72
ITGB4-210ENST00000584025 HSP90B1P14625 803 aaKnown RBP19.56■□□□□ 0.72
ITGB4-210ENST00000584025 HOXA10P31260 410 aaPredicted RBP19.56■□□□□ 0.72
ITGB4-210ENST00000584025 RARSP54136 660 aaKnown RBP19.56■□□□□ 0.72
ITGB4-210ENST00000584025 YY1P25490 414 aa19.55■□□□□ 0.72
ITGB4-210ENST00000584025 GCKRQ14397 625 aa19.55■□□□□ 0.72
ITGB4-210ENST00000584025 CRAMP1Q96RY5 1269 aa19.55■□□□□ 0.72
ITGB4-210ENST00000584025 BEND3Q5T5X7 828 aa19.54■□□□□ 0.72
ITGB4-210ENST00000584025 DDX46Q7L014 1031 aaKnown RBP19.54■□□□□ 0.72
ITGB4-210ENST00000584025 UBE3BQ7Z3V4 1068 aa19.54■□□□□ 0.72
ITGB4-210ENST00000584025 CDHR2Q9BYE9 1310 aa19.53■□□□□ 0.72
ITGB4-210ENST00000584025 SOGA3Q5TF21 947 aa19.53■□□□□ 0.72
ITGB4-210ENST00000584025 SRCIN1Q9C0H9 1055 aa19.53■□□□□ 0.72
ITGB4-210ENST00000584025 ABCC4O15439 1325 aa19.52■□□□□ 0.72
ITGB4-210ENST00000584025 H7C1W4 665 aa19.52■□□□□ 0.72
ITGB4-210ENST00000584025 PDE8AO60658 829 aa19.52■□□□□ 0.72
ITGB4-210ENST00000584025 NOB1Q9ULX3 412 aaKnown RBP19.52■□□□□ 0.72
ITGB4-210ENST00000584025 ALDH1L1O75891 902 aa19.51■□□□□ 0.71
ITGB4-210ENST00000584025 BRPF1P55201 1214 aaPredicted RBP19.51■□□□□ 0.71
ITGB4-210ENST00000584025 RASSF7Q02833 373 aa19.51■□□□□ 0.71
ITGB4-210ENST00000584025 SF3B3Q15393 1217 aaKnown RBP19.51■□□□□ 0.71
ITGB4-210ENST00000584025 CCDC93Q567U6 631 aa19.51■□□□□ 0.71
ITGB4-210ENST00000584025 GOLGB1Q14789 3259 aaKnown RBP19.51■□□□□ 0.71
ITGB4-210ENST00000584025 TIAM2Q8IVF5 1701 aa19.51■□□□□ 0.71
ITGB4-210ENST00000584025 PPEF1O14829 653 aaPredicted RBP19.5■□□□□ 0.71
ITGB4-210ENST00000584025 C7orf43Q8WVR3 580 aa19.5■□□□□ 0.71
ITGB4-210ENST00000584025 KIF16BQ96L93 1317 aa19.5■□□□□ 0.71
ITGB4-210ENST00000584025 GRAPQ13588 217 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms