RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 ZPR1O75312 459 aa10.58□□□□□ -0.72
SMCHD1-210ENST00000583800 TM4SF1P30408 202 aa10.58□□□□□ -0.72
SMCHD1-210ENST00000583800 RASSF7Q02833 373 aa10.58□□□□□ -0.72
SMCHD1-210ENST00000583800 COL11A2P13942 1736 aaPredicted RBP10.58□□□□□ -0.72
SMCHD1-210ENST00000583800 CYP19A1P11511 503 aaPredicted RBP10.57□□□□□ -0.72
SMCHD1-210ENST00000583800 HTRA3P83110 453 aa10.57□□□□□ -0.72
SMCHD1-210ENST00000583800 NFIXQ14938 502 aa10.57□□□□□ -0.72
SMCHD1-210ENST00000583800 MTHFSDQ2M296 383 aaKnown RBP10.57□□□□□ -0.72
SMCHD1-210ENST00000583800 C16orf71Q8IYS4 520 aaPredicted RBP10.57□□□□□ -0.72
SMCHD1-210ENST00000583800 DNAJC5GQ8N7S2 189 aa10.57□□□□□ -0.72
SMCHD1-210ENST00000583800 RBM46Q8TBY0 533 aaKnown RBP10.57□□□□□ -0.72
SMCHD1-210ENST00000583800 KIF7Q2M1P5 1343 aa10.57□□□□□ -0.72
SMCHD1-210ENST00000583800 CARMIL3Q8ND23 1372 aa10.56□□□□□ -0.72
SMCHD1-210ENST00000583800 PBX2P40425 430 aa10.56□□□□□ -0.72
SMCHD1-210ENST00000583800 FBXO22Q8NEZ5 403 aa10.56□□□□□ -0.72
SMCHD1-210ENST00000583800 BCL2L12Q9HB09 334 aa10.56□□□□□ -0.72
SMCHD1-210ENST00000583800 NARFQ9UHQ1 456 aa10.56□□□□□ -0.72
SMCHD1-210ENST00000583800 DICER1Q9UPY3 1922 aaKnown RBP10.56□□□□□ -0.72
SMCHD1-210ENST00000583800 KDM2BQ8NHM5 1336 aa10.56□□□□□ -0.72
SMCHD1-210ENST00000583800 COL3A1P02461 1466 aaPredicted RBP10.55□□□□□ -0.72
SMCHD1-210ENST00000583800 BCORQ6W2J9 1755 aa10.55□□□□□ -0.72
SMCHD1-210ENST00000583800 NUDT7P0C024 238 aa10.55□□□□□ -0.72
SMCHD1-210ENST00000583800 CC2D1BQ5T0F9 858 aaKnown RBP10.55□□□□□ -0.72
SMCHD1-210ENST00000583800 POTEEQ6S8J3 1075 aa10.55□□□□□ -0.72
SMCHD1-210ENST00000583800 KCNV2Q8TDN2 545 aa10.55□□□□□ -0.72
SMCHD1-210ENST00000583800 RRAGCQ9HB90 399 aa10.55□□□□□ -0.72
SMCHD1-210ENST00000583800 FER1L6Q2WGJ9 1857 aa10.55□□□□□ -0.72
SMCHD1-210ENST00000583800 DIAPH1O60610 1272 aaKnown RBP10.54□□□□□ -0.72
SMCHD1-210ENST00000583800 SERPINB2P05120 415 aa10.54□□□□□ -0.72
SMCHD1-210ENST00000583800 CANXP27824 592 aaKnown RBP10.54□□□□□ -0.72
SMCHD1-210ENST00000583800 PRELPP51888 382 aa10.54□□□□□ -0.72
SMCHD1-210ENST00000583800 CCER1Q8TC90 406 aaPredicted RBP10.54□□□□□ -0.72
SMCHD1-210ENST00000583800 ARFGEF2Q9Y6D5 1785 aa10.53□□□□□ -0.72
SMCHD1-210ENST00000583800 FSTL1Q12841 308 aa10.53□□□□□ -0.72
SMCHD1-210ENST00000583800 BICDL1Q6ZP65 573 aa10.53□□□□□ -0.72
SMCHD1-210ENST00000583800 PODXL2Q9NZ53 605 aa10.53□□□□□ -0.72
SMCHD1-210ENST00000583800 PLA2G2EQ9NZK7 142 aa10.53□□□□□ -0.72
SMCHD1-210ENST00000583800 C2orf72A6NCS6 295 aa10.52□□□□□ -0.73
SMCHD1-210ENST00000583800 CNGB1Q14028 1251 aaPredicted RBP10.52□□□□□ -0.73
SMCHD1-210ENST00000583800 C2CD5Q86YS7 1000 aa10.52□□□□□ -0.73
SMCHD1-210ENST00000583800 TTC5Q8N0Z6 440 aa10.52□□□□□ -0.73
SMCHD1-210ENST00000583800 KLRG1Q96E93 195 aa10.52□□□□□ -0.73
SMCHD1-210ENST00000583800 LHX6Q9UPM6 363 aa10.52□□□□□ -0.73
SMCHD1-210ENST00000583800 ZC3H4Q9UPT8 1303 aaKnown RBP10.52□□□□□ -0.73
SMCHD1-210ENST00000583800 NFKBIEO00221 500 aa10.51□□□□□ -0.73
SMCHD1-210ENST00000583800 PER1O15534 1290 aaPredicted RBP10.51□□□□□ -0.73
SMCHD1-210ENST00000583800 LMNB1P20700 586 aa10.51□□□□□ -0.73
SMCHD1-210ENST00000583800 EIF5P55010 431 aaKnown RBP10.51□□□□□ -0.73
SMCHD1-210ENST00000583800 TBC1D9BQ66K14 1250 aa10.51□□□□□ -0.73
SMCHD1-210ENST00000583800 TTLL6Q8N841 843 aa10.51□□□□□ -0.73
SMCHD1-210ENST00000583800 ZNF496Q96IT1 587 aaPredicted RBP10.51□□□□□ -0.73
SMCHD1-210ENST00000583800 ZNF330Q9Y3S2 320 aaPredicted RBP10.51□□□□□ -0.73
SMCHD1-210ENST00000583800 SLX4Q8IY92 1834 aa10.51□□□□□ -0.73
SMCHD1-210ENST00000583800 HEG1Q9ULI3 1381 aa10.51□□□□□ -0.73
SMCHD1-210ENST00000583800 H0YIN7 160 aa10.5□□□□□ -0.73
SMCHD1-210ENST00000583800 U2SURPO15042 1029 aaKnown RBP10.5□□□□□ -0.73
SMCHD1-210ENST00000583800 TEFQ10587 303 aa10.5□□□□□ -0.73
SMCHD1-210ENST00000583800 CCDC24Q8N4L8 307 aa10.5□□□□□ -0.73
SMCHD1-210ENST00000583800 SMC1BQ8NDV3 1235 aa10.5□□□□□ -0.73
SMCHD1-210ENST00000583800 IL17REQ8NFR9 667 aa10.5□□□□□ -0.73
SMCHD1-210ENST00000583800 WDR70Q9NW82 654 aa10.5□□□□□ -0.73
SMCHD1-210ENST00000583800 HCSTQ9UBK5 93 aa10.5□□□□□ -0.73
SMCHD1-210ENST00000583800 A0A087WZG4 1122 aa10.49□□□□□ -0.73
SMCHD1-210ENST00000583800 GLTPD2A6NH11 291 aa10.49□□□□□ -0.73
SMCHD1-210ENST00000583800 STARD3NLO95772 234 aa10.49□□□□□ -0.73
SMCHD1-210ENST00000583800 NEUROD2Q15784 382 aa10.49□□□□□ -0.73
SMCHD1-210ENST00000583800 PRR5LQ6MZQ0 368 aa10.49□□□□□ -0.73
SMCHD1-210ENST00000583800 ZNF790Q6PG37 636 aa10.49□□□□□ -0.73
SMCHD1-210ENST00000583800 JMYQ8N9B5 988 aa10.49□□□□□ -0.73
SMCHD1-210ENST00000583800 GAS2L2Q8NHY3 880 aa10.49□□□□□ -0.73
SMCHD1-210ENST00000583800 ZNF622Q969S3 477 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMCHD1-210ENST00000583800 TBC1D2BQ9UPU7 963 aa10.49□□□□□ -0.73
SMCHD1-210ENST00000583800 PCDHGA4Q9Y5G9 962 aa10.49□□□□□ -0.73
SMCHD1-210ENST00000583800 GNAT3A8MTJ3 354 aa10.48□□□□□ -0.73
SMCHD1-210ENST00000583800 SLC34A2O95436 690 aa10.48□□□□□ -0.73
SMCHD1-210ENST00000583800 ZC3H15Q8WU90 426 aaKnown RBP10.48□□□□□ -0.73
SMCHD1-210ENST00000583800 MFRPQ9BY79 579 aa10.48□□□□□ -0.73
SMCHD1-210ENST00000583800 KCNQ3O43525 872 aa10.47□□□□□ -0.73
SMCHD1-210ENST00000583800 C21orf2O43822 256 aa10.47□□□□□ -0.73
SMCHD1-210ENST00000583800 A1BGP04217 495 aa10.47□□□□□ -0.73
SMCHD1-210ENST00000583800 VEGFAP15692 232 aaPredicted RBP10.47□□□□□ -0.73
SMCHD1-210ENST00000583800 IL6STP40189 918 aaPredicted RBP10.47□□□□□ -0.73
SMCHD1-210ENST00000583800 COL13A1Q5TAT6 717 aaPredicted RBP10.47□□□□□ -0.73
SMCHD1-210ENST00000583800 CEMIPQ8WUJ3 1361 aa10.47□□□□□ -0.73
SMCHD1-210ENST00000583800 NPC1L1Q9UHC9 1359 aa10.47□□□□□ -0.73
SMCHD1-210ENST00000583800 POTECB2RU33 542 aa10.46□□□□□ -0.73
SMCHD1-210ENST00000583800 CAMTA2O94983 1202 aa10.46□□□□□ -0.73
SMCHD1-210ENST00000583800 PDE6BP35913 854 aa10.46□□□□□ -0.73
SMCHD1-210ENST00000583800 PIP4K2AP48426 406 aaPredicted RBP10.46□□□□□ -0.73
SMCHD1-210ENST00000583800 FMNL2Q96PY5 1086 aa10.46□□□□□ -0.73
SMCHD1-210ENST00000583800 BRIP1Q9BX63 1249 aa10.46□□□□□ -0.73
SMCHD1-210ENST00000583800 TEX13AQ9BXU3 409 aaPredicted RBP10.46□□□□□ -0.73
SMCHD1-210ENST00000583800 LAMB4A4D0S4 1761 aa10.46□□□□□ -0.74
SMCHD1-210ENST00000583800 DLG5Q8TDM6 1919 aa10.46□□□□□ -0.74
SMCHD1-210ENST00000583800 PCNTO95613 3336 aa10.45□□□□□ -0.74
SMCHD1-210ENST00000583800 NPHP1O15259 732 aa10.45□□□□□ -0.74
SMCHD1-210ENST00000583800 PRKAR2BP31323 418 aa10.45□□□□□ -0.74
SMCHD1-210ENST00000583800 ERFEQ4G0M1 354 aa10.45□□□□□ -0.74
SMCHD1-210ENST00000583800 CNBD1Q8NA66 436 aa10.45□□□□□ -0.74
SMCHD1-210ENST00000583800 PHACTR3Q96KR7 559 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms