RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 GAS2L2Q8NHY3 880 aa23.31■■□□□ 1.32
SNX11-212ENST00000583320 TNRC18O15417 2968 aaPredicted RBP23.31■■□□□ 1.32
SNX11-212ENST00000583320 CCDC85CA6NKD9 419 aa23.3■■□□□ 1.32
SNX11-212ENST00000583320 FAM177BA6PVY3 158 aa23.3■■□□□ 1.32
SNX11-212ENST00000583320 CLEC4GQ6UXB4 293 aa23.3■■□□□ 1.32
SNX11-212ENST00000583320 RTKN2Q8IZC4 609 aa23.3■■□□□ 1.32
SNX11-212ENST00000583320 CAPNS2Q96L46 248 aa23.3■■□□□ 1.32
SNX11-212ENST00000583320 CYP4F22Q6NT55 531 aa23.29■■□□□ 1.32
SNX11-212ENST00000583320 CCDC146Q8IYE0 955 aa23.29■■□□□ 1.32
SNX11-212ENST00000583320 PLEKHF1Q96S99 279 aa23.29■■□□□ 1.32
SNX11-212ENST00000583320 TSKSQ9UJT2 592 aa23.29■■□□□ 1.32
SNX11-212ENST00000583320 NIP7Q9Y221 180 aaKnown RBP eCLIP23.29■■□□□ 1.32
SNX11-212ENST00000583320 BTBD11A6QL63 1104 aa23.28■■□□□ 1.32
SNX11-212ENST00000583320 NBPF26B4DH59 902 aa23.28■■□□□ 1.32
SNX11-212ENST00000583320 MLLT1Q03111 559 aaPredicted RBP23.28■■□□□ 1.32
SNX11-212ENST00000583320 GRM1Q13255 1194 aa23.28■■□□□ 1.32
SNX11-212ENST00000583320 NBPF10Q6P3W6 841 aaKnown RBP23.28■■□□□ 1.32
SNX11-212ENST00000583320 NBPF15Q8N660 670 aa23.28■■□□□ 1.32
SNX11-212ENST00000583320 RSPH6AQ9H0K4 717 aa23.28■■□□□ 1.32
SNX11-212ENST00000583320 ABCC12Q96J65 1359 aa23.27■■□□□ 1.32
SNX11-212ENST00000583320 TRAF5O00463 557 aa23.27■■□□□ 1.32
SNX11-212ENST00000583320 APAF1O14727 1248 aa23.27■■□□□ 1.32
SNX11-212ENST00000583320 RGS19P49795 217 aa23.27■■□□□ 1.32
SNX11-212ENST00000583320 GJA3Q9Y6H8 435 aa23.27■■□□□ 1.32
SNX11-212ENST00000583320 TRPM7Q96QT4 1865 aa23.26■■□□□ 1.31
SNX11-212ENST00000583320 EPS15P42566 896 aa23.26■■□□□ 1.31
SNX11-212ENST00000583320 SCNN1DP51172 638 aa23.26■■□□□ 1.31
SNX11-212ENST00000583320 CST9Q5W186 159 aa23.26■■□□□ 1.31
SNX11-212ENST00000583320 TPTE2Q6XPS3 522 aa23.26■■□□□ 1.31
SNX11-212ENST00000583320 PAXIP1Q6ZW49 1069 aaPredicted RBP23.26■■□□□ 1.31
SNX11-212ENST00000583320 PHACTR3Q96KR7 559 aa23.26■■□□□ 1.31
SNX11-212ENST00000583320 ZNF652Q9Y2D9 606 aa23.26■■□□□ 1.31
SNX11-212ENST00000583320 NEFMP07197 916 aa23.25■■□□□ 1.31
SNX11-212ENST00000583320 HLFQ16534 295 aa23.25■■□□□ 1.31
SNX11-212ENST00000583320 PSMD1Q99460 953 aa23.25■■□□□ 1.31
SNX11-212ENST00000583320 GPR101Q96P66 508 aaPredicted RBP23.24■■□□□ 1.31
SNX11-212ENST00000583320 MAPK8IP3Q9UPT6 1336 aa23.24■■□□□ 1.31
SNX11-212ENST00000583320 AOC2O75106 756 aa23.23■■□□□ 1.31
SNX11-212ENST00000583320 CCDC27Q2M243 656 aa23.23■■□□□ 1.31
SNX11-212ENST00000583320 JDP2Q8WYK2 163 aa23.23■■□□□ 1.31
SNX11-212ENST00000583320 ZNF521Q96K83 1311 aa23.23■■□□□ 1.31
SNX11-212ENST00000583320 ALDH1B1P30837 517 aa23.22■■□□□ 1.31
SNX11-212ENST00000583320 CRY2Q49AN0 593 aa23.22■■□□□ 1.31
SNX11-212ENST00000583320 PRKAR2BP31323 418 aa23.21■■□□□ 1.31
SNX11-212ENST00000583320 TLL2Q9Y6L7 1015 aa23.21■■□□□ 1.31
SNX11-212ENST00000583320 SNRPA1P09661 255 aaKnown RBP23.2■■□□□ 1.3
SNX11-212ENST00000583320 LMOD1P29536 600 aaPredicted RBP23.2■■□□□ 1.3
SNX11-212ENST00000583320 ECE1P42892 770 aa23.2■■□□□ 1.3
SNX11-212ENST00000583320 EIF6P56537 245 aaKnown RBP23.2■■□□□ 1.3
SNX11-212ENST00000583320 NUTM1Q86Y26 1132 aa23.2■■□□□ 1.3
SNX11-212ENST00000583320 BEGAINQ9BUH8 593 aa23.2■■□□□ 1.3
SNX11-212ENST00000583320 RGL2O15211 777 aa23.19■■□□□ 1.3
SNX11-212ENST00000583320 MCM10Q7L590 875 aa23.19■■□□□ 1.3
SNX11-212ENST00000583320 TMPOP42166 694 aaKnown RBP23.18■■□□□ 1.3
SNX11-212ENST00000583320 MCOLN1Q9GZU1 580 aa23.18■■□□□ 1.3
SNX11-212ENST00000583320 LAMB4A4D0S4 1761 aa23.18■■□□□ 1.3
SNX11-212ENST00000583320 CASP8AP2Q9UKL3 1982 aa23.18■■□□□ 1.3
SNX11-212ENST00000583320 LARGE2Q8N3Y3 721 aa23.17■■□□□ 1.3
SNX11-212ENST00000583320 SALL2Q9Y467 1007 aaPredicted RBP23.17■■□□□ 1.3
SNX11-212ENST00000583320 RIC1Q4ADV7 1423 aa23.16■■□□□ 1.3
SNX11-212ENST00000583320 GTF2E1P29083 439 aaPredicted RBP23.16■■□□□ 1.3
SNX11-212ENST00000583320 USP50Q70EL3 339 aaPredicted RBP23.16■■□□□ 1.3
SNX11-212ENST00000583320 NUP98P52948 1817 aa23.16■■□□□ 1.3
SNX11-212ENST00000583320 PDE4DIPQ5VU43 2346 aa23.16■■□□□ 1.3
SNX11-212ENST00000583320 DCTN1Q14203 1278 aa23.15■■□□□ 1.3
SNX11-212ENST00000583320 GOLGA2Q08379 1002 aa23.14■■□□□ 1.29
SNX11-212ENST00000583320 NFE2L2Q16236 605 aa23.14■■□□□ 1.29
SNX11-212ENST00000583320 CC2D2BQ6DHV5 1058 aa23.14■■□□□ 1.29
SNX11-212ENST00000583320 C3orf67Q6ZVT6 689 aa23.14■■□□□ 1.29
SNX11-212ENST00000583320 SAPCD2Q86UD0 394 aa23.14■■□□□ 1.29
SNX11-212ENST00000583320 WDR63Q8IWG1 891 aa23.14■■□□□ 1.29
SNX11-212ENST00000583320 WWC1Q8IX03 1113 aa23.14■■□□□ 1.29
SNX11-212ENST00000583320 CFAP44Q96MT7 982 aa23.14■■□□□ 1.29
SNX11-212ENST00000583320 UBN2Q6ZU65 1347 aa23.13■■□□□ 1.29
SNX11-212ENST00000583320 TCERG1O14776 1098 aaKnown RBP23.13■■□□□ 1.29
SNX11-212ENST00000583320 HOXA10P31260 410 aaPredicted RBP23.13■■□□□ 1.29
SNX11-212ENST00000583320 MAP2K2P36507 400 aa23.13■■□□□ 1.29
SNX11-212ENST00000583320 GLIS2Q9BZE0 524 aaPredicted RBP23.12■■□□□ 1.29
SNX11-212ENST00000583320 GPRC5DQ9NZD1 345 aa23.12■■□□□ 1.29
SNX11-212ENST00000583320 CELF2O95319 508 aaKnown RBP23.11■■□□□ 1.29
SNX11-212ENST00000583320 RPGRQ92834 1020 aaKnown RBP23.11■■□□□ 1.29
SNX11-212ENST00000583320 PCDH10Q9P2E7 1040 aa23.11■■□□□ 1.29
SNX11-212ENST00000583320 RRP7AQ9Y3A4 280 aaKnown RBP23.11■■□□□ 1.29
SNX11-212ENST00000583320 PPEF1O14829 653 aaPredicted RBP23.1■■□□□ 1.29
SNX11-212ENST00000583320 GPTP24298 496 aa23.1■■□□□ 1.29
SNX11-212ENST00000583320 RIPK4P57078 832 aa23.1■■□□□ 1.29
SNX11-212ENST00000583320 LMOD3Q0VAK6 560 aa23.1■■□□□ 1.29
SNX11-212ENST00000583320 AOC3Q16853 763 aa23.1■■□□□ 1.29
SNX11-212ENST00000583320 NIM1KQ8IY84 436 aa23.1■■□□□ 1.29
SNX11-212ENST00000583320 ZIC5Q96T25 663 aa23.1■■□□□ 1.29
SNX11-212ENST00000583320 NYXQ9GZU5 481 aa23.1■■□□□ 1.29
SNX11-212ENST00000583320 ADARB2Q9NS39 739 aaKnown RBP23.1■■□□□ 1.29
SNX11-212ENST00000583320 DLG5Q8TDM6 1919 aa23.1■■□□□ 1.29
SNX11-212ENST00000583320 PPIP5K2O43314 1243 aa23.09■■□□□ 1.29
SNX11-212ENST00000583320 NEUROD2Q15784 382 aa23.09■■□□□ 1.29
SNX11-212ENST00000583320 TTLL7Q6ZT98 887 aa23.09■■□□□ 1.29
SNX11-212ENST00000583320 MIS18AQ9NYP9 233 aa23.09■■□□□ 1.29
SNX11-212ENST00000583320 E9PSI1 815 aa23.08■■□□□ 1.29
SNX11-212ENST00000583320 BRPF1P55201 1214 aaPredicted RBP23.08■■□□□ 1.29
SNX11-212ENST00000583320 SLFN5Q08AF3 891 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms