RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 GCKRQ14397 625 aa20.09■□□□□ 0.81
CSNK1D-212ENST00000580061 MVPQ14764 893 aaKnown RBP20.09■□□□□ 0.81
CSNK1D-212ENST00000580061 SUSD4Q5VX71 490 aa20.09■□□□□ 0.81
CSNK1D-212ENST00000580061 ITPRIPQ8IWB1 547 aa20.09■□□□□ 0.81
CSNK1D-212ENST00000580061 COG6Q9Y2V7 657 aa20.09■□□□□ 0.81
CSNK1D-212ENST00000580061 NRXN2Q9P2S2 1712 aa20.09■□□□□ 0.81
CSNK1D-212ENST00000580061 DDR1Q08345 913 aa20.08■□□□□ 0.81
CSNK1D-212ENST00000580061 MTFR1LQ9H019 292 aa20.08■□□□□ 0.81
CSNK1D-212ENST00000580061 POLRMTO00411 1230 aaKnown RBP20.07■□□□□ 0.8
CSNK1D-212ENST00000580061 ZBTB7AO95365 584 aa20.07■□□□□ 0.8
CSNK1D-212ENST00000580061 MMP10P09238 476 aa20.07■□□□□ 0.8
CSNK1D-212ENST00000580061 PPP1R42Q7Z4L9 355 aa20.07■□□□□ 0.8
CSNK1D-212ENST00000580061 GRM8O00222 908 aa20.06■□□□□ 0.8
CSNK1D-212ENST00000580061 NTSR2O95665 410 aa20.06■□□□□ 0.8
CSNK1D-212ENST00000580061 UTP14AQ9BVJ6 771 aaKnown RBP20.06■□□□□ 0.8
CSNK1D-212ENST00000580061 USP44Q9H0E7 712 aa20.06■□□□□ 0.8
CSNK1D-212ENST00000580061 DDX19BQ9UMR2 479 aa20.06■□□□□ 0.8
CSNK1D-212ENST00000580061 LAMB2P55268 1798 aa20.06■□□□□ 0.8
CSNK1D-212ENST00000580061 UTYO14607 1347 aa20.05■□□□□ 0.8
CSNK1D-212ENST00000580061 FAM177BA6PVY3 158 aa20.05■□□□□ 0.8
CSNK1D-212ENST00000580061 H7C1W4 665 aa20.05■□□□□ 0.8
CSNK1D-212ENST00000580061 ZBTB7BO15156 539 aaPredicted RBP20.05■□□□□ 0.8
CSNK1D-212ENST00000580061 SERPINB2P05120 415 aa20.05■□□□□ 0.8
CSNK1D-212ENST00000580061 ZBTB38Q8NAP3 1195 aaPredicted RBP20.05■□□□□ 0.8
CSNK1D-212ENST00000580061 CRBNQ96SW2 442 aa20.05■□□□□ 0.8
CSNK1D-212ENST00000580061 NYXQ9GZU5 481 aa20.05■□□□□ 0.8
CSNK1D-212ENST00000580061 C9orf78Q9NZ63 289 aaPredicted RBP20.05■□□□□ 0.8
CSNK1D-212ENST00000580061 TRMT112Q9UI30 125 aaKnown RBP20.05■□□□□ 0.8
CSNK1D-212ENST00000580061 DDX60Q8IY21 1712 aaKnown RBP20.05■□□□□ 0.8
CSNK1D-212ENST00000580061 PCCAP05165 728 aaPredicted RBP20.04■□□□□ 0.8
CSNK1D-212ENST00000580061 NBPF5PQ86XG9 351 aaPredicted RBP20.04■□□□□ 0.8
CSNK1D-212ENST00000580061 MEIS3Q99687 375 aa20.04■□□□□ 0.8
CSNK1D-212ENST00000580061 PARP3Q9Y6F1 533 aa20.04■□□□□ 0.8
CSNK1D-212ENST00000580061 NBPF7P0C2Y1 421 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-212ENST00000580061 CASP7P55210 303 aa20.03■□□□□ 0.8
CSNK1D-212ENST00000580061 IRX6P78412 446 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-212ENST00000580061 TPTE2Q6XPS3 522 aa20.03■□□□□ 0.8
CSNK1D-212ENST00000580061 UBE3BQ7Z3V4 1068 aa20.03■□□□□ 0.8
CSNK1D-212ENST00000580061 JARID2Q92833 1246 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-212ENST00000580061 FAM89AQ96GI7 184 aa20.03■□□□□ 0.8
CSNK1D-212ENST00000580061 ATF5Q9Y2D1 282 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-212ENST00000580061 MYH3P11055 1940 aa20.03■□□□□ 0.8
CSNK1D-212ENST00000580061 SH3TC1Q8TE82 1336 aa20.02■□□□□ 0.8
CSNK1D-212ENST00000580061 RTL5Q5HYW3 569 aaPredicted RBP20.02■□□□□ 0.8
CSNK1D-212ENST00000580061 NUTM1Q86Y26 1132 aa20.02■□□□□ 0.8
CSNK1D-212ENST00000580061 SYNE4Q8N205 404 aa20.02■□□□□ 0.8
CSNK1D-212ENST00000580061 CDHR2Q9BYE9 1310 aa20.02■□□□□ 0.79
CSNK1D-212ENST00000580061 GNAI3P08754 354 aa20.01■□□□□ 0.79
CSNK1D-212ENST00000580061 ERFEQ4G0M1 354 aa20.01■□□□□ 0.79
CSNK1D-212ENST00000580061 PRR5LQ6MZQ0 368 aa20.01■□□□□ 0.79
CSNK1D-212ENST00000580061 CNBD1Q8NA66 436 aa20.01■□□□□ 0.79
CSNK1D-212ENST00000580061 ANKRD31Q8N7Z5 1873 aa20.01■□□□□ 0.79
CSNK1D-212ENST00000580061 UBTFL1P0CB47 393 aaPredicted RBP20■□□□□ 0.79
CSNK1D-212ENST00000580061 GTF2E1P29083 439 aaPredicted RBP20■□□□□ 0.79
CSNK1D-212ENST00000580061 SGIP1Q9BQI5 828 aa20■□□□□ 0.79
CSNK1D-212ENST00000580061 CHMP4BQ9H444 224 aaKnown RBP20■□□□□ 0.79
CSNK1D-212ENST00000580061 ABCC12Q96J65 1359 aa19.99■□□□□ 0.79
CSNK1D-212ENST00000580061 POLD1P28340 1107 aa19.99■□□□□ 0.79
CSNK1D-212ENST00000580061 SLC10A5Q5PT55 438 aa19.99■□□□□ 0.79
CSNK1D-212ENST00000580061 ZBTB40Q9NUA8 1239 aa19.99■□□□□ 0.79
CSNK1D-212ENST00000580061 TNRC6CQ9HCJ0 1690 aaKnown RBP19.99■□□□□ 0.79
CSNK1D-212ENST00000580061 KIF13BQ9NQT8 1826 aa19.98■□□□□ 0.79
CSNK1D-212ENST00000580061 IRS4O14654 1257 aaPredicted RBP19.98■□□□□ 0.79
CSNK1D-212ENST00000580061 NPHP1O15259 732 aa19.98■□□□□ 0.79
CSNK1D-212ENST00000580061 PTGER2P43116 358 aa19.98■□□□□ 0.79
CSNK1D-212ENST00000580061 CCDC24Q8N4L8 307 aa19.98■□□□□ 0.79
CSNK1D-212ENST00000580061 EXOC6Q8TAG9 804 aa19.98■□□□□ 0.79
CSNK1D-212ENST00000580061 SUCLG2Q96I99 432 aa19.98■□□□□ 0.79
CSNK1D-212ENST00000580061 RIC1Q4ADV7 1423 aa19.98■□□□□ 0.79
CSNK1D-212ENST00000580061 ST5P78524 1137 aa19.97■□□□□ 0.79
CSNK1D-212ENST00000580061 KAZALD1Q96I82 304 aa19.97■□□□□ 0.79
CSNK1D-212ENST00000580061 PLA2G12BQ9BX93 195 aa19.97■□□□□ 0.79
CSNK1D-212ENST00000580061 SPON1Q9HCB6 807 aa19.97■□□□□ 0.79
CSNK1D-212ENST00000580061 HDAC5Q9UQL6 1122 aa19.97■□□□□ 0.79
CSNK1D-212ENST00000580061 GNAI2P04899 355 aa19.96■□□□□ 0.79
CSNK1D-212ENST00000580061 NEFLP07196 543 aa19.96■□□□□ 0.79
CSNK1D-212ENST00000580061 HCLS1P14317 486 aaPredicted RBP19.96■□□□□ 0.79
CSNK1D-212ENST00000580061 LRRFIP2Q9Y608 721 aaKnown RBP19.96■□□□□ 0.79
CSNK1D-212ENST00000580061 PDE8AO60658 829 aa19.95■□□□□ 0.78
CSNK1D-212ENST00000580061 HSP90B1P14625 803 aaKnown RBP19.95■□□□□ 0.78
CSNK1D-212ENST00000580061 EPHA10Q5JZY3 1008 aa19.95■□□□□ 0.78
CSNK1D-212ENST00000580061 C10orf71Q711Q0 1435 aa19.94■□□□□ 0.78
CSNK1D-212ENST00000580061 FOXO4P98177 505 aa19.94■□□□□ 0.78
CSNK1D-212ENST00000580061 BICC1Q9H694 974 aaKnown RBP19.94■□□□□ 0.78
CSNK1D-212ENST00000580061 C1orf115Q9H7X2 142 aa19.94■□□□□ 0.78
CSNK1D-212ENST00000580061 AAMPQ13685 434 aa19.93■□□□□ 0.78
CSNK1D-212ENST00000580061 BRIP1Q9BX63 1249 aa19.93■□□□□ 0.78
CSNK1D-212ENST00000580061 CTSWP56202 376 aa19.92■□□□□ 0.78
CSNK1D-212ENST00000580061 RABL6Q3YEC7 729 aaPredicted RBP19.92■□□□□ 0.78
CSNK1D-212ENST00000580061 ANKRD44Q8N8A2 993 aa19.92■□□□□ 0.78
CSNK1D-212ENST00000580061 NLRP3Q96P20 1036 aa19.92■□□□□ 0.78
CSNK1D-212ENST00000580061 COL11A2P13942 1736 aaPredicted RBP19.92■□□□□ 0.78
CSNK1D-212ENST00000580061 CSF1RP07333 972 aa19.91■□□□□ 0.78
CSNK1D-212ENST00000580061 C3orf67Q6ZVT6 689 aa19.91■□□□□ 0.78
CSNK1D-212ENST00000580061 TTLL11Q8NHH1 800 aa19.91■□□□□ 0.78
CSNK1D-212ENST00000580061 KLRG2A4D1S0 409 aaPredicted RBP19.9■□□□□ 0.78
CSNK1D-212ENST00000580061 PDE6BP35913 854 aa19.9■□□□□ 0.78
CSNK1D-212ENST00000580061 SF3B3Q15393 1217 aaKnown RBP19.9■□□□□ 0.78
CSNK1D-212ENST00000580061 LMBR1LQ6UX01 489 aa19.9■□□□□ 0.78
CSNK1D-212ENST00000580061 KIAA1551Q9HCM1 1747 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms