RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 SRCIN1Q9C0H9 1055 aa17.51■□□□□ 0.39
CSNK1D-209ENST00000578904 CARMIL3Q8ND23 1372 aa17.51■□□□□ 0.39
CSNK1D-209ENST00000578904 ALDH1L1O75891 902 aa17.5■□□□□ 0.39
CSNK1D-209ENST00000578904 GNAI3P08754 354 aa17.5■□□□□ 0.39
CSNK1D-209ENST00000578904 POLD1P28340 1107 aa17.5■□□□□ 0.39
CSNK1D-209ENST00000578904 TCIRG1Q13488 830 aa17.5■□□□□ 0.39
CSNK1D-209ENST00000578904 COL24A1Q17RW2 1714 aa17.5■□□□□ 0.39
CSNK1D-209ENST00000578904 SPON1Q9HCB6 807 aa17.49■□□□□ 0.39
CSNK1D-209ENST00000578904 PARP3Q9Y6F1 533 aa17.49■□□□□ 0.39
CSNK1D-209ENST00000578904 UBN2Q6ZU65 1347 aa17.48■□□□□ 0.39
CSNK1D-209ENST00000578904 ATP5J2-PTCD1G3V325 749 aa17.48■□□□□ 0.39
CSNK1D-209ENST00000578904 ZBTB7BO15156 539 aaPredicted RBP17.48■□□□□ 0.39
CSNK1D-209ENST00000578904 TM4SF1P30408 202 aa17.48■□□□□ 0.39
CSNK1D-209ENST00000578904 DDR1Q08345 913 aa17.48■□□□□ 0.39
CSNK1D-209ENST00000578904 PARP10Q53GL7 1025 aa17.48■□□□□ 0.39
CSNK1D-209ENST00000578904 ZNF34Q8IZ26 560 aa17.48■□□□□ 0.39
CSNK1D-209ENST00000578904 LINS1Q8NG48 757 aa17.48■□□□□ 0.39
CSNK1D-209ENST00000578904 AFDNP55196 1824 aaKnown RBP17.48■□□□□ 0.39
CSNK1D-209ENST00000578904 FAM177BA6PVY3 158 aa17.47■□□□□ 0.39
CSNK1D-209ENST00000578904 POLRMTO00411 1230 aaKnown RBP17.47■□□□□ 0.39
CSNK1D-209ENST00000578904 ISCA1Q9BUE6 129 aa17.47■□□□□ 0.39
CSNK1D-209ENST00000578904 ZBTB40Q9NUA8 1239 aa17.47■□□□□ 0.39
CSNK1D-209ENST00000578904 IBTKQ9P2D0 1353 aaPredicted RBP17.47■□□□□ 0.39
CSNK1D-209ENST00000578904 NPHP1O15259 732 aa17.46■□□□□ 0.39
CSNK1D-209ENST00000578904 SERPINB2P05120 415 aa17.46■□□□□ 0.39
CSNK1D-209ENST00000578904 NLRP10Q86W26 655 aa17.46■□□□□ 0.39
CSNK1D-209ENST00000578904 NBPF5PQ86XG9 351 aaPredicted RBP17.46■□□□□ 0.39
CSNK1D-209ENST00000578904 RWDD1Q9H446 243 aaPredicted RBP17.46■□□□□ 0.39
CSNK1D-209ENST00000578904 DCAF8L1A6NGE4 600 aa17.45■□□□□ 0.38
CSNK1D-209ENST00000578904 IGKV5-2P06315 115 aa17.45■□□□□ 0.38
CSNK1D-209ENST00000578904 PTGER2P43116 358 aa17.45■□□□□ 0.38
CSNK1D-209ENST00000578904 CWF19L2Q2TBE0 894 aaKnown RBP17.45■□□□□ 0.38
CSNK1D-209ENST00000578904 BEND3Q5T5X7 828 aa17.45■□□□□ 0.38
CSNK1D-209ENST00000578904 PPP1R42Q7Z4L9 355 aa17.45■□□□□ 0.38
CSNK1D-209ENST00000578904 PELP1Q8IZL8 1130 aaKnown RBP17.45■□□□□ 0.38
CSNK1D-209ENST00000578904 SGIP1Q9BQI5 828 aa17.45■□□□□ 0.38
CSNK1D-209ENST00000578904 NYXQ9GZU5 481 aa17.45■□□□□ 0.38
CSNK1D-209ENST00000578904 CWC25Q9NXE8 425 aaPredicted RBP17.45■□□□□ 0.38
CSNK1D-209ENST00000578904 NEURL1BA8MQ27 555 aa17.44■□□□□ 0.38
CSNK1D-209ENST00000578904 TRIM28Q13263 835 aaKnown RBP17.44■□□□□ 0.38
CSNK1D-209ENST00000578904 SUSD4Q5VX71 490 aa17.44■□□□□ 0.38
CSNK1D-209ENST00000578904 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
CSNK1D-209ENST00000578904 CNBD1Q8NA66 436 aa17.44■□□□□ 0.38
CSNK1D-209ENST00000578904 CCDC191Q8NCU4 936 aa17.44■□□□□ 0.38
CSNK1D-209ENST00000578904 UTP14AQ9BVJ6 771 aaKnown RBP17.44■□□□□ 0.38
CSNK1D-209ENST00000578904 C9orf78Q9NZ63 289 aaPredicted RBP17.44■□□□□ 0.38
CSNK1D-209ENST00000578904 NRXN2Q9P2S2 1712 aa17.44■□□□□ 0.38
CSNK1D-209ENST00000578904 NTSR2O95665 410 aa17.43■□□□□ 0.38
CSNK1D-209ENST00000578904 GNAI2P04899 355 aa17.43■□□□□ 0.38
CSNK1D-209ENST00000578904 UBTFL1P0CB47 393 aaPredicted RBP17.43■□□□□ 0.38
CSNK1D-209ENST00000578904 GTF2E1P29083 439 aaPredicted RBP17.42■□□□□ 0.38
CSNK1D-209ENST00000578904 ST5P78524 1137 aa17.42■□□□□ 0.38
CSNK1D-209ENST00000578904 PRR5LQ6MZQ0 368 aa17.42■□□□□ 0.38
CSNK1D-209ENST00000578904 TPTE2Q6XPS3 522 aa17.42■□□□□ 0.38
CSNK1D-209ENST00000578904 CENPQQ7L2Z9 268 aaPredicted RBP17.42■□□□□ 0.38
CSNK1D-209ENST00000578904 RPAP2Q8IXW5 612 aaPredicted RBP17.42■□□□□ 0.38
CSNK1D-209ENST00000578904 TRMT112Q9UI30 125 aaKnown RBP17.42■□□□□ 0.38
CSNK1D-209ENST00000578904 HMMRO75330 724 aa17.41■□□□□ 0.38
CSNK1D-209ENST00000578904 NUTM1Q86Y26 1132 aa17.41■□□□□ 0.38
CSNK1D-209ENST00000578904 PPP1R1BQ9UD71 204 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-209ENST00000578904 ABCC12Q96J65 1359 aa17.4■□□□□ 0.38
CSNK1D-209ENST00000578904 C10orf71Q711Q0 1435 aa17.4■□□□□ 0.38
CSNK1D-209ENST00000578904 GCKRQ14397 625 aa17.4■□□□□ 0.38
CSNK1D-209ENST00000578904 ZBTB38Q8NAP3 1195 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-209ENST00000578904 MEIS3Q99687 375 aa17.4■□□□□ 0.38
CSNK1D-209ENST00000578904 SH3TC1Q8TE82 1336 aa17.4■□□□□ 0.38
CSNK1D-209ENST00000578904 GRM8O00222 908 aa17.39■□□□□ 0.37
CSNK1D-209ENST00000578904 HDAC1Q13547 482 aaPredicted RBP17.39■□□□□ 0.37
CSNK1D-209ENST00000578904 ERFEQ4G0M1 354 aa17.39■□□□□ 0.37
CSNK1D-209ENST00000578904 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
CSNK1D-209ENST00000578904 KLHL34Q8N239 644 aa17.39■□□□□ 0.37
CSNK1D-209ENST00000578904 CCDC24Q8N4L8 307 aa17.39■□□□□ 0.37
CSNK1D-209ENST00000578904 FAM89AQ96GI7 184 aa17.39■□□□□ 0.37
CSNK1D-209ENST00000578904 USP44Q9H0E7 712 aa17.39■□□□□ 0.37
CSNK1D-209ENST00000578904 PCCAP05165 728 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-209ENST00000578904 UBE3BQ7Z3V4 1068 aa17.38■□□□□ 0.37
CSNK1D-209ENST00000578904 JARID2Q92833 1246 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-209ENST00000578904 PCDHB15Q9Y5E8 787 aa17.37■□□□□ 0.37
CSNK1D-209ENST00000578904 LAMB2P55268 1798 aa17.37■□□□□ 0.37
CSNK1D-209ENST00000578904 RIC1Q4ADV7 1423 aa17.37■□□□□ 0.37
CSNK1D-209ENST00000578904 TNRC6CQ9HCJ0 1690 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-209ENST00000578904 IRS4O14654 1257 aaPredicted RBP17.36■□□□□ 0.37
CSNK1D-209ENST00000578904 HSP90B1P14625 803 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-209ENST00000578904 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
CSNK1D-209ENST00000578904 UTYO14607 1347 aa17.36■□□□□ 0.37
CSNK1D-209ENST00000578904 H7C1W4 665 aa17.35■□□□□ 0.37
CSNK1D-209ENST00000578904 HCLS1P14317 486 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-209ENST00000578904 ANKRD44Q8N8A2 993 aa17.35■□□□□ 0.37
CSNK1D-209ENST00000578904 BRIP1Q9BX63 1249 aa17.35■□□□□ 0.37
CSNK1D-209ENST00000578904 CDHR2Q9BYE9 1310 aa17.35■□□□□ 0.37
CSNK1D-209ENST00000578904 KIF13BQ9NQT8 1826 aa17.35■□□□□ 0.37
CSNK1D-209ENST00000578904 ANKRD31Q8N7Z5 1873 aa17.35■□□□□ 0.37
CSNK1D-209ENST00000578904 DDX60Q8IY21 1712 aaKnown RBP17.34■□□□□ 0.37
CSNK1D-209ENST00000578904 GCC1Q96CN9 775 aa17.34■□□□□ 0.37
CSNK1D-209ENST00000578904 C1orf115Q9H7X2 142 aa17.34■□□□□ 0.37
CSNK1D-209ENST00000578904 ZBTB47Q9UFB7 747 aaPredicted RBP17.34■□□□□ 0.37
CSNK1D-209ENST00000578904 PDE6BP35913 854 aa17.33■□□□□ 0.36
CSNK1D-209ENST00000578904 CASP7P55210 303 aa17.33■□□□□ 0.36
CSNK1D-209ENST00000578904 CEP85Q6P2H3 762 aa17.33■□□□□ 0.36
CSNK1D-209ENST00000578904 CD2APQ9Y5K6 639 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms