RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 UTYO14607 1347 aa21■□□□□ 0.95
SREBF1-218ENST00000578469 NEURL1BA8MQ27 555 aa20.99■□□□□ 0.95
SREBF1-218ENST00000578469 ANP32AP39687 249 aaKnown RBP20.99■□□□□ 0.95
SREBF1-218ENST00000578469 SSH3Q8TE77 659 aa20.99■□□□□ 0.95
SREBF1-218ENST00000578469 PNMA6EA0A0J9YXQ4 647 aa20.98■□□□□ 0.95
SREBF1-218ENST00000578469 IGKV5-2P06315 115 aa20.98■□□□□ 0.95
SREBF1-218ENST00000578469 PPP1R42Q7Z4L9 355 aa20.98■□□□□ 0.95
SREBF1-218ENST00000578469 POLA2Q14181 598 aa20.97■□□□□ 0.95
SREBF1-218ENST00000578469 GCKRQ14397 625 aa20.97■□□□□ 0.95
SREBF1-218ENST00000578469 SRGAP3O43295 1099 aa20.96■□□□□ 0.95
SREBF1-218ENST00000578469 RAB11FIP3O75154 756 aa20.96■□□□□ 0.95
SREBF1-218ENST00000578469 PHF14O94880 888 aa20.96■□□□□ 0.95
SREBF1-218ENST00000578469 MTX1Q13505 466 aa20.96■□□□□ 0.95
SREBF1-218ENST00000578469 HSP90AB4PQ58FF6 505 aa20.96■□□□□ 0.95
SREBF1-218ENST00000578469 APBB1O00213 710 aa20.95■□□□□ 0.94
SREBF1-218ENST00000578469 SSFA2P28290 1259 aa20.95■□□□□ 0.94
SREBF1-218ENST00000578469 KIF6Q6ZMV9 814 aa20.95■□□□□ 0.94
SREBF1-218ENST00000578469 TTLL7Q6ZT98 887 aa20.95■□□□□ 0.94
SREBF1-218ENST00000578469 ZNF526Q8TF50 670 aaPredicted RBP20.95■□□□□ 0.94
SREBF1-218ENST00000578469 LRRCC1Q9C099 1032 aa20.95■□□□□ 0.94
SREBF1-218ENST00000578469 UBR3Q6ZT12 1888 aa20.94■□□□□ 0.94
SREBF1-218ENST00000578469 CYP19A1P11511 503 aaPredicted RBP20.94■□□□□ 0.94
SREBF1-218ENST00000578469 BMP2KLQ5H9B9 411 aa20.94■□□□□ 0.94
SREBF1-218ENST00000578469 EXOC6BQ9Y2D4 811 aa20.94■□□□□ 0.94
SREBF1-218ENST00000578469 ARFGEF2Q9Y6D5 1785 aa20.94■□□□□ 0.94
SREBF1-218ENST00000578469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.93■□□□□ 0.94
SREBF1-218ENST00000578469 HSPA6P17066 643 aa20.93■□□□□ 0.94
SREBF1-218ENST00000578469 NPM2Q86SE8 214 aaKnown RBP20.93■□□□□ 0.94
SREBF1-218ENST00000578469 SMARCA5O60264 1052 aaPredicted RBP20.92■□□□□ 0.94
SREBF1-218ENST00000578469 SURF6O75683 361 aaKnown RBP20.92■□□□□ 0.94
SREBF1-218ENST00000578469 PLEKHM2Q8IWE5 1019 aa20.92■□□□□ 0.94
SREBF1-218ENST00000578469 SUCLG2Q96I99 432 aa20.92■□□□□ 0.94
SREBF1-218ENST00000578469 ATP5J2-PTCD1G3V325 749 aa20.91■□□□□ 0.94
SREBF1-218ENST00000578469 SLC4A9Q96Q91 983 aa20.91■□□□□ 0.94
SREBF1-218ENST00000578469 ZBTB3Q9H5J0 574 aa20.91■□□□□ 0.94
SREBF1-218ENST00000578469 UPF2Q9HAU5 1272 aaKnown RBP20.91■□□□□ 0.94
SREBF1-218ENST00000578469 CWC25Q9NXE8 425 aaPredicted RBP20.91■□□□□ 0.94
SREBF1-218ENST00000578469 ZNF330Q9Y3S2 320 aaPredicted RBP20.91■□□□□ 0.94
SREBF1-218ENST00000578469 COL15A1P39059 1388 aa20.9■□□□□ 0.94
SREBF1-218ENST00000578469 A0A087WZG4 1122 aa20.9■□□□□ 0.94
SREBF1-218ENST00000578469 LOC102724428A0A0B4J2F2 783 aa20.9■□□□□ 0.94
SREBF1-218ENST00000578469 SIK1P57059 783 aa20.9■□□□□ 0.94
SREBF1-218ENST00000578469 CCDC191Q8NCU4 936 aa20.9■□□□□ 0.94
SREBF1-218ENST00000578469 KIF1BPQ96EK5 621 aa20.89■□□□□ 0.93
SREBF1-218ENST00000578469 BCL11AQ9H165 835 aa20.89■□□□□ 0.93
SREBF1-218ENST00000578469 WWC3Q9ULE0 1092 aa20.89■□□□□ 0.93
SREBF1-218ENST00000578469 NOP58Q9Y2X3 529 aaKnown RBP20.89■□□□□ 0.93
SREBF1-218ENST00000578469 GNPATO15228 680 aa20.88■□□□□ 0.93
SREBF1-218ENST00000578469 EIF5BO60841 1220 aaKnown RBP20.88■□□□□ 0.93
SREBF1-218ENST00000578469 ATP6V1AP38606 617 aa20.88■□□□□ 0.93
SREBF1-218ENST00000578469 IL6STP40189 918 aaPredicted RBP20.88■□□□□ 0.93
SREBF1-218ENST00000578469 OS9Q13438 667 aaPredicted RBP20.88■□□□□ 0.93
SREBF1-218ENST00000578469 TCIRG1Q13488 830 aa20.88■□□□□ 0.93
SREBF1-218ENST00000578469 HSP90AB3PQ58FF7 597 aa20.88■□□□□ 0.93
SREBF1-218ENST00000578469 ERC1Q8IUD2 1116 aa20.88■□□□□ 0.93
SREBF1-218ENST00000578469 C16orf71Q8IYS4 520 aaPredicted RBP20.88■□□□□ 0.93
SREBF1-218ENST00000578469 BICC1Q9H694 974 aaKnown RBP20.88■□□□□ 0.93
SREBF1-218ENST00000578469 AFDNP55196 1824 aaKnown RBP20.88■□□□□ 0.93
SREBF1-218ENST00000578469 MAP3K15Q6ZN16 1313 aa20.87■□□□□ 0.93
SREBF1-218ENST00000578469 AMIGO3Q86WK7 504 aa20.87■□□□□ 0.93
SREBF1-218ENST00000578469 TJP1Q07157 1748 aa20.87■□□□□ 0.93
SREBF1-218ENST00000578469 H7C1W4 665 aa20.86■□□□□ 0.93
SREBF1-218ENST00000578469 TTC22Q5TAA0 569 aa20.86■□□□□ 0.93
SREBF1-218ENST00000578469 UBE3BQ7Z3V4 1068 aa20.86■□□□□ 0.93
SREBF1-218ENST00000578469 LINC00116Q8NCU8 138 aa20.86■□□□□ 0.93
SREBF1-218ENST00000578469 KAZALD1Q96I82 304 aa20.86■□□□□ 0.93
SREBF1-218ENST00000578469 ISCA1Q9BUE6 129 aa20.86■□□□□ 0.93
SREBF1-218ENST00000578469 OSBPL3Q9H4L5 887 aa20.86■□□□□ 0.93
SREBF1-218ENST00000578469 ZBTB1Q9Y2K1 713 aa20.86■□□□□ 0.93
SREBF1-218ENST00000578469 CICQ96RK0 1608 aaPredicted RBP20.86■□□□□ 0.93
SREBF1-218ENST00000578469 TRIM28Q13263 835 aaKnown RBP20.85■□□□□ 0.93
SREBF1-218ENST00000578469 RHPN1Q8TCX5 695 aa20.85■□□□□ 0.93
SREBF1-218ENST00000578469 CCDC87Q9NVE4 849 aa20.85■□□□□ 0.93
SREBF1-218ENST00000578469 G3BP1Q13283 466 aaKnown RBP eCLIP20.84■□□□□ 0.93
SREBF1-218ENST00000578469 ERVV-1B6SEH8 477 aa20.83■□□□□ 0.93
SREBF1-218ENST00000578469 PDE1AP54750 535 aa20.83■□□□□ 0.93
SREBF1-218ENST00000578469 CASP7P55210 303 aa20.83■□□□□ 0.93
SREBF1-218ENST00000578469 GIGYF2Q6Y7W6 1299 aaKnown RBP20.83■□□□□ 0.93
SREBF1-218ENST00000578469 SMIM5Q71RC9 77 aa20.83■□□□□ 0.93
SREBF1-218ENST00000578469 OTUD7AQ8TE49 926 aaPredicted RBP20.83■□□□□ 0.93
SREBF1-218ENST00000578469 DDRGK1Q96HY6 314 aa20.83■□□□□ 0.93
SREBF1-218ENST00000578469 CDC45O75419 566 aa20.82■□□□□ 0.92
SREBF1-218ENST00000578469 MMP10P09238 476 aa20.82■□□□□ 0.92
SREBF1-218ENST00000578469 RABL6Q3YEC7 729 aaPredicted RBP20.82■□□□□ 0.92
SREBF1-218ENST00000578469 AOX1Q06278 1338 aa20.81■□□□□ 0.92
SREBF1-218ENST00000578469 MX1P20591 662 aa20.81■□□□□ 0.92
SREBF1-218ENST00000578469 CRKLP46109 303 aaKnown RBP20.81■□□□□ 0.92
SREBF1-218ENST00000578469 INTS5Q6P9B9 1019 aaKnown RBP20.81■□□□□ 0.92
SREBF1-218ENST00000578469 DZIP3Q86Y13 1208 aaKnown RBP20.81■□□□□ 0.92
SREBF1-218ENST00000578469 JARID2Q92833 1246 aaPredicted RBP20.81■□□□□ 0.92
SREBF1-218ENST00000578469 IPO9Q96P70 1041 aaKnown RBP20.81■□□□□ 0.92
SREBF1-218ENST00000578469 IL1RAPL2Q9NP60 686 aa20.81■□□□□ 0.92
SREBF1-218ENST00000578469 STAP2Q9UGK3 403 aa20.81■□□□□ 0.92
SREBF1-218ENST00000578469 SEC24BO95487 1268 aa20.8■□□□□ 0.92
SREBF1-218ENST00000578469 GSPT1P15170 499 aaKnown RBP20.8■□□□□ 0.92
SREBF1-218ENST00000578469 EIF5P55010 431 aaKnown RBP20.8■□□□□ 0.92
SREBF1-218ENST00000578469 ITPK1Q13572 414 aa20.8■□□□□ 0.92
SREBF1-218ENST00000578469 EPHA10Q5JZY3 1008 aa20.8■□□□□ 0.92
SREBF1-218ENST00000578469 CLASRPQ8N2M8 674 aaKnown RBP20.8■□□□□ 0.92
SREBF1-218ENST00000578469 RTCBQ9Y3I0 505 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms