RNA–Protein interactions for RNA: ENST00000578446.1

USP22-208, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 3

Gene USP22, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-208ENST00000578446 PPP1R42Q7Z4L9 355 aa13.46□□□□□ -0.25
USP22-208ENST00000578446 NBPF5PQ86XG9 351 aaPredicted RBP13.46□□□□□ -0.25
USP22-208ENST00000578446 UTP14AQ9BVJ6 771 aaKnown RBP13.46□□□□□ -0.25
USP22-208ENST00000578446 COG6Q9Y2V7 657 aa13.46□□□□□ -0.25
USP22-208ENST00000578446 IBTKQ9P2D0 1353 aaPredicted RBP13.45□□□□□ -0.26
USP22-208ENST00000578446 TM4SF1P30408 202 aa13.45□□□□□ -0.26
USP22-208ENST00000578446 DDR1Q08345 913 aa13.45□□□□□ -0.26
USP22-208ENST00000578446 MVPQ14764 893 aaKnown RBP13.45□□□□□ -0.26
USP22-208ENST00000578446 SUSD4Q5VX71 490 aa13.45□□□□□ -0.26
USP22-208ENST00000578446 CNBD1Q8NA66 436 aa13.45□□□□□ -0.26
USP22-208ENST00000578446 NYXQ9GZU5 481 aa13.45□□□□□ -0.26
USP22-208ENST00000578446 C9orf78Q9NZ63 289 aaPredicted RBP13.45□□□□□ -0.26
USP22-208ENST00000578446 TRMT112Q9UI30 125 aaKnown RBP13.45□□□□□ -0.26
USP22-208ENST00000578446 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
USP22-208ENST00000578446 PARP3Q9Y6F1 533 aa13.45□□□□□ -0.26
USP22-208ENST00000578446 GRM8O00222 908 aa13.44□□□□□ -0.26
USP22-208ENST00000578446 POLRMTO00411 1230 aaKnown RBP13.44□□□□□ -0.26
USP22-208ENST00000578446 NTSR2O95665 410 aa13.44□□□□□ -0.26
USP22-208ENST00000578446 SERPINB2P05120 415 aa13.44□□□□□ -0.26
USP22-208ENST00000578446 POLD1P28340 1107 aa13.44□□□□□ -0.26
USP22-208ENST00000578446 GTF2E1P29083 439 aaPredicted RBP13.44□□□□□ -0.26
USP22-208ENST00000578446 RTL5Q5HYW3 569 aaPredicted RBP13.44□□□□□ -0.26
USP22-208ENST00000578446 UBE3BQ7Z3V4 1068 aa13.44□□□□□ -0.26
USP22-208ENST00000578446 DDX19BQ9UMR2 479 aa13.44□□□□□ -0.26
USP22-208ENST00000578446 ANKRD36CQ5JPF3 1778 aa13.44□□□□□ -0.26
USP22-208ENST00000578446 SH3TC1Q8TE82 1336 aa13.43□□□□□ -0.26
USP22-208ENST00000578446 PCCAP05165 728 aaPredicted RBP13.43□□□□□ -0.26
USP22-208ENST00000578446 NEFLP07196 543 aa13.43□□□□□ -0.26
USP22-208ENST00000578446 TPTE2Q6XPS3 522 aa13.43□□□□□ -0.26
USP22-208ENST00000578446 ZBTB38Q8NAP3 1195 aaPredicted RBP13.43□□□□□ -0.26
USP22-208ENST00000578446 FAM89AQ96GI7 184 aa13.43□□□□□ -0.26
USP22-208ENST00000578446 NUP98P52948 1817 aa13.43□□□□□ -0.26
USP22-208ENST00000578446 COL24A1Q17RW2 1714 aa13.42□□□□□ -0.26
USP22-208ENST00000578446 UBTFL1P0CB47 393 aaPredicted RBP13.42□□□□□ -0.26
USP22-208ENST00000578446 IRX6P78412 446 aaPredicted RBP13.42□□□□□ -0.26
USP22-208ENST00000578446 ST5P78524 1137 aa13.42□□□□□ -0.26
USP22-208ENST00000578446 NUTM1Q86Y26 1132 aa13.42□□□□□ -0.26
USP22-208ENST00000578446 MEIS3Q99687 375 aa13.42□□□□□ -0.26
USP22-208ENST00000578446 CHMP4BQ9H444 224 aaKnown RBP13.42□□□□□ -0.26
USP22-208ENST00000578446 SPON1Q9HCB6 807 aa13.42□□□□□ -0.26
USP22-208ENST00000578446 N4BP2Q86UW6 1770 aaPredicted RBP13.42□□□□□ -0.26
USP22-208ENST00000578446 GNAI3P08754 354 aa13.41□□□□□ -0.26
USP22-208ENST00000578446 HSP90B1P14625 803 aaKnown RBP13.41□□□□□ -0.26
USP22-208ENST00000578446 ERFEQ4G0M1 354 aa13.41□□□□□ -0.26
USP22-208ENST00000578446 PRR5LQ6MZQ0 368 aa13.41□□□□□ -0.26
USP22-208ENST00000578446 JARID2Q92833 1246 aaPredicted RBP13.41□□□□□ -0.26
USP22-208ENST00000578446 CRBNQ96SW2 442 aa13.41□□□□□ -0.26
USP22-208ENST00000578446 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
USP22-208ENST00000578446 ABCC12Q96J65 1359 aa13.41□□□□□ -0.26
USP22-208ENST00000578446 H7C1W4 665 aa13.4□□□□□ -0.26
USP22-208ENST00000578446 IRS4O14654 1257 aaPredicted RBP13.4□□□□□ -0.26
USP22-208ENST00000578446 NBPF7P0C2Y1 421 aaPredicted RBP13.4□□□□□ -0.26
USP22-208ENST00000578446 CCDC24Q8N4L8 307 aa13.4□□□□□ -0.26
USP22-208ENST00000578446 HDAC5Q9UQL6 1122 aa13.4□□□□□ -0.26
USP22-208ENST00000578446 UTYO14607 1347 aa13.39□□□□□ -0.27
USP22-208ENST00000578446 CDHR2Q9BYE9 1310 aa13.39□□□□□ -0.27
USP22-208ENST00000578446 AFDNP55196 1824 aaKnown RBP13.39□□□□□ -0.27
USP22-208ENST00000578446 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
USP22-208ENST00000578446 ZBTB7BO15156 539 aaPredicted RBP13.38□□□□□ -0.27
USP22-208ENST00000578446 GNAI2P04899 355 aa13.38□□□□□ -0.27
USP22-208ENST00000578446 HCLS1P14317 486 aaPredicted RBP13.38□□□□□ -0.27
USP22-208ENST00000578446 PTGER2P43116 358 aa13.38□□□□□ -0.27
USP22-208ENST00000578446 CASP7P55210 303 aa13.38□□□□□ -0.27
USP22-208ENST00000578446 SUCLG2Q96I99 432 aa13.38□□□□□ -0.27
USP22-208ENST00000578446 SGIP1Q9BQI5 828 aa13.38□□□□□ -0.27
USP22-208ENST00000578446 CTSWP56202 376 aa13.37□□□□□ -0.27
USP22-208ENST00000578446 EXOC6Q8TAG9 804 aa13.37□□□□□ -0.27
USP22-208ENST00000578446 C1orf115Q9H7X2 142 aa13.37□□□□□ -0.27
USP22-208ENST00000578446 LRRFIP2Q9Y608 721 aaKnown RBP13.37□□□□□ -0.27
USP22-208ENST00000578446 RIC1Q4ADV7 1423 aa13.37□□□□□ -0.27
USP22-208ENST00000578446 C10orf71Q711Q0 1435 aa13.37□□□□□ -0.27
USP22-208ENST00000578446 PDE8AO60658 829 aa13.36□□□□□ -0.27
USP22-208ENST00000578446 SLC10A5Q5PT55 438 aa13.36□□□□□ -0.27
USP22-208ENST00000578446 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
USP22-208ENST00000578446 NLRP3Q96P20 1036 aa13.36□□□□□ -0.27
USP22-208ENST00000578446 BRIP1Q9BX63 1249 aa13.36□□□□□ -0.27
USP22-208ENST00000578446 PLA2G12BQ9BX93 195 aa13.36□□□□□ -0.27
USP22-208ENST00000578446 BICC1Q9H694 974 aaKnown RBP13.36□□□□□ -0.27
USP22-208ENST00000578446 ZBTB40Q9NUA8 1239 aa13.36□□□□□ -0.27
USP22-208ENST00000578446 PPP1R1BQ9UD71 204 aaPredicted RBP13.36□□□□□ -0.27
USP22-208ENST00000578446 NRXN2Q9P2S2 1712 aa13.36□□□□□ -0.27
USP22-208ENST00000578446 PDE6BP35913 854 aa13.35□□□□□ -0.27
USP22-208ENST00000578446 CHMP3Q9Y3E7 222 aa13.35□□□□□ -0.27
USP22-208ENST00000578446 FOXO4P98177 505 aa13.34□□□□□ -0.27
USP22-208ENST00000578446 AAMPQ13685 434 aa13.34□□□□□ -0.27
USP22-208ENST00000578446 CCDC152Q4G0S7 254 aa13.34□□□□□ -0.27
USP22-208ENST00000578446 EPHA10Q5JZY3 1008 aa13.34□□□□□ -0.27
USP22-208ENST00000578446 LMBR1LQ6UX01 489 aa13.34□□□□□ -0.27
USP22-208ENST00000578446 C3orf67Q6ZVT6 689 aa13.34□□□□□ -0.27
USP22-208ENST00000578446 RPGRQ92834 1020 aaKnown RBP13.34□□□□□ -0.27
USP22-208ENST00000578446 KAZALD1Q96I82 304 aa13.34□□□□□ -0.27
USP22-208ENST00000578446 TNRC6CQ9HCJ0 1690 aaKnown RBP13.34□□□□□ -0.27
USP22-208ENST00000578446 ANKRD44Q8N8A2 993 aa13.33□□□□□ -0.28
USP22-208ENST00000578446 CCDC85AQ96PX6 553 aaPredicted RBP13.33□□□□□ -0.28
USP22-208ENST00000578446 LAMB2P55268 1798 aa13.32□□□□□ -0.28
USP22-208ENST00000578446 SF3B3Q15393 1217 aaKnown RBP13.32□□□□□ -0.28
USP22-208ENST00000578446 FAM161AQ3B820 660 aa13.32□□□□□ -0.28
USP22-208ENST00000578446 RABL6Q3YEC7 729 aaPredicted RBP13.32□□□□□ -0.28
USP22-208ENST00000578446 CRY2Q49AN0 593 aa13.32□□□□□ -0.28
USP22-208ENST00000578446 C2CD5Q86YS7 1000 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms