RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.79■■■■□ 3
LIMD2-203ENST00000578067 RABEP1Q15276 862 aa33.79■■■■□ 3
LIMD2-203ENST00000578067 JCADQ9P266 1359 aa33.78■■■■□ 3
LIMD2-203ENST00000578067 TRIM28Q13263 835 aaKnown RBP33.77■■■■□ 3
LIMD2-203ENST00000578067 KAT6BQ8WYB5 2073 aa33.76■■■■□ 3
LIMD2-203ENST00000578067 MAP3K15Q6ZN16 1313 aa33.76■■■□□ 2.99
LIMD2-203ENST00000578067 NFKBIBQ15653 356 aa33.74■■■□□ 2.99
LIMD2-203ENST00000578067 SPRYD3Q8NCJ5 442 aa33.74■■■□□ 2.99
LIMD2-203ENST00000578067 CCDC8Q9H0W5 538 aaPredicted RBP33.74■■■□□ 2.99
LIMD2-203ENST00000578067 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.74■■■□□ 2.99
LIMD2-203ENST00000578067 ACSBG1Q96GR2 724 aa33.74■■■□□ 2.99
LIMD2-203ENST00000578067 NGLY1Q96IV0 654 aa33.74■■■□□ 2.99
LIMD2-203ENST00000578067 AK9Q5TCS8 1911 aa33.73■■■□□ 2.99
LIMD2-203ENST00000578067 GIGYF2Q6Y7W6 1299 aaKnown RBP33.72■■■□□ 2.99
LIMD2-203ENST00000578067 C8orf37Q96NL8 207 aa33.72■■■□□ 2.99
LIMD2-203ENST00000578067 ARXQ96QS3 562 aa33.72■■■□□ 2.99
LIMD2-203ENST00000578067 ZBTB1Q9Y2K1 713 aa33.72■■■□□ 2.99
LIMD2-203ENST00000578067 CHMP3Q9Y3E7 222 aa33.72■■■□□ 2.99
LIMD2-203ENST00000578067 CD2BP2O95400 341 aaKnown RBP33.71■■■□□ 2.99
LIMD2-203ENST00000578067 A0A0G2JS52 829 aa33.7■■■□□ 2.99
LIMD2-203ENST00000578067 VPS72Q15906 364 aa33.7■■■□□ 2.99
LIMD2-203ENST00000578067 ANO2Q9NQ90 1003 aa33.7■■■□□ 2.99
LIMD2-203ENST00000578067 EPB41L2O43491 1005 aaKnown RBP33.7■■■□□ 2.99
LIMD2-203ENST00000578067 TLR7Q9NYK1 1049 aaKnown RBP33.7■■■□□ 2.99
LIMD2-203ENST00000578067 IL6STP40189 918 aaPredicted RBP33.69■■■□□ 2.98
LIMD2-203ENST00000578067 TFCP2Q12800 502 aa33.69■■■□□ 2.98
LIMD2-203ENST00000578067 BCL9LQ86UU0 1499 aa33.69■■■□□ 2.98
LIMD2-203ENST00000578067 K7ELQ4 463 aaPredicted RBP33.69■■■□□ 2.98
LIMD2-203ENST00000578067 HSP90AB3PQ58FF7 597 aa33.69■■■□□ 2.98
LIMD2-203ENST00000578067 PCCAP05165 728 aaPredicted RBP33.68■■■□□ 2.98
LIMD2-203ENST00000578067 MCCP23508 829 aa33.68■■■□□ 2.98
LIMD2-203ENST00000578067 EVI5LQ96CN4 794 aa33.68■■■□□ 2.98
LIMD2-203ENST00000578067 MYT1Q01538 1121 aa33.67■■■□□ 2.98
LIMD2-203ENST00000578067 TNNI3KQ59H18 835 aa33.67■■■□□ 2.98
LIMD2-203ENST00000578067 FPGT-TNNI3KV9GXZ4 949 aa33.67■■■□□ 2.98
LIMD2-203ENST00000578067 HLFQ16534 295 aa33.67■■■□□ 2.98
LIMD2-203ENST00000578067 FAM98CQ17RN3 349 aaKnown RBP33.67■■■□□ 2.98
LIMD2-203ENST00000578067 SGSM2O43147 1006 aa33.66■■■□□ 2.98
LIMD2-203ENST00000578067 ZBTB38Q8NAP3 1195 aaPredicted RBP33.65■■■□□ 2.98
LIMD2-203ENST00000578067 IL25Q9H293 177 aa33.65■■■□□ 2.98
LIMD2-203ENST00000578067 FNBP4Q8N3X1 1017 aaPredicted RBP33.65■■■□□ 2.98
LIMD2-203ENST00000578067 ERVV-1B6SEH8 477 aa33.63■■■□□ 2.97
LIMD2-203ENST00000578067 ATP6V1AP38606 617 aa33.63■■■□□ 2.97
LIMD2-203ENST00000578067 PLA2G12BQ9BX93 195 aa33.63■■■□□ 2.97
LIMD2-203ENST00000578067 CHMP5Q9NZZ3 219 aa33.63■■■□□ 2.97
LIMD2-203ENST00000578067 DIAPH3Q9NSV4 1193 aa33.63■■■□□ 2.97
LIMD2-203ENST00000578067 SPATA31A6Q5VVP1 1343 aa33.63■■■□□ 2.97
LIMD2-203ENST00000578067 LOC102724428A0A0B4J2F2 783 aa33.62■■■□□ 2.97
LIMD2-203ENST00000578067 SIK1P57059 783 aa33.62■■■□□ 2.97
LIMD2-203ENST00000578067 ANAPC15P60006 121 aa33.62■■■□□ 2.97
LIMD2-203ENST00000578067 DZIP3Q86Y13 1208 aaKnown RBP33.62■■■□□ 2.97
LIMD2-203ENST00000578067 FAM89AQ96GI7 184 aa33.62■■■□□ 2.97
LIMD2-203ENST00000578067 ATG9AQ7Z3C6 839 aa33.62■■■□□ 2.97
LIMD2-203ENST00000578067 NLRP10Q86W26 655 aa33.62■■■□□ 2.97
LIMD2-203ENST00000578067 RUFY2Q8WXA3 655 aa33.62■■■□□ 2.97
LIMD2-203ENST00000578067 CCDC87Q9NVE4 849 aa33.61■■■□□ 2.97
LIMD2-203ENST00000578067 DBNLQ9UJU6 430 aaKnown RBP33.61■■■□□ 2.97
LIMD2-203ENST00000578067 ST18O60284 1047 aa33.6■■■□□ 2.97
LIMD2-203ENST00000578067 IL15P40933 162 aaPredicted RBP33.6■■■□□ 2.97
LIMD2-203ENST00000578067 INTS5Q6P9B9 1019 aaKnown RBP33.6■■■□□ 2.97
LIMD2-203ENST00000578067 CWC27Q6UX04 472 aaKnown RBP33.6■■■□□ 2.97
LIMD2-203ENST00000578067 SMARCC1Q92922 1105 aaPredicted RBP33.6■■■□□ 2.97
LIMD2-203ENST00000578067 BOLA2Q9H3K6 86 aa33.6■■■□□ 2.97
LIMD2-203ENST00000578067 CDHR2Q9BYE9 1310 aa33.6■■■□□ 2.97
LIMD2-203ENST00000578067 PALLDQ8WX93 1383 aa33.59■■■□□ 2.97
LIMD2-203ENST00000578067 GPTP24298 496 aa33.59■■■□□ 2.97
LIMD2-203ENST00000578067 EIF5P55010 431 aaKnown RBP33.59■■■□□ 2.97
LIMD2-203ENST00000578067 TBC1D2BQ9UPU7 963 aa33.59■■■□□ 2.97
LIMD2-203ENST00000578067 EYA2O00167 538 aa33.58■■■□□ 2.97
LIMD2-203ENST00000578067 ATP5JP18859 108 aa33.58■■■□□ 2.97
LIMD2-203ENST00000578067 FRAT2O75474 233 aaPredicted RBP33.58■■■□□ 2.97
LIMD2-203ENST00000578067 CIAO1O76071 339 aa33.58■■■□□ 2.97
LIMD2-203ENST00000578067 DDIT3P35638 169 aa33.58■■■□□ 2.97
LIMD2-203ENST00000578067 CRKLP46109 303 aaKnown RBP33.58■■■□□ 2.97
LIMD2-203ENST00000578067 IL17RAQ96F46 866 aa33.58■■■□□ 2.97
LIMD2-203ENST00000578067 GPR108Q9NPR9 543 aa33.58■■■□□ 2.97
LIMD2-203ENST00000578067 HIP1O00291 1037 aa33.57■■■□□ 2.96
LIMD2-203ENST00000578067 HSP90AA1P07900 732 aaKnown RBP33.57■■■□□ 2.96
LIMD2-203ENST00000578067 CCDC57Q2TAC2 916 aa33.57■■■□□ 2.96
LIMD2-203ENST00000578067 CICQ96RK0 1608 aaPredicted RBP33.57■■■□□ 2.96
LIMD2-203ENST00000578067 ANKRD36CQ5JPF3 1778 aa33.57■■■□□ 2.96
LIMD2-203ENST00000578067 KCNQ2O43526 872 aa33.57■■■□□ 2.96
LIMD2-203ENST00000578067 KIAA1211Q6ZU35 1233 aa33.57■■■□□ 2.96
LIMD2-203ENST00000578067 ZNF594Q96JF6 807 aaPredicted RBP33.57■■■□□ 2.96
LIMD2-203ENST00000578067 PALD1Q9ULE6 856 aa33.57■■■□□ 2.96
LIMD2-203ENST00000578067 CSF1RP07333 972 aa33.56■■■□□ 2.96
LIMD2-203ENST00000578067 ITPK1Q13572 414 aa33.56■■■□□ 2.96
LIMD2-203ENST00000578067 LSG1Q9H089 658 aaKnown RBP33.56■■■□□ 2.96
LIMD2-203ENST00000578067 RAD50Q92878 1312 aa33.56■■■□□ 2.96
LIMD2-203ENST00000578067 HSPA4P34932 840 aa33.55■■■□□ 2.96
LIMD2-203ENST00000578067 USP21Q9UK80 565 aa33.55■■■□□ 2.96
LIMD2-203ENST00000578067 DBNDD2Q9BQY9 259 aa33.55■■■□□ 2.96
LIMD2-203ENST00000578067 LRRC24Q50LG9 513 aa33.54■■■□□ 2.96
LIMD2-203ENST00000578067 FBXO3Q9UK99 471 aa33.54■■■□□ 2.96
LIMD2-203ENST00000578067 CERKQ8TCT0 537 aa33.53■■■□□ 2.96
LIMD2-203ENST00000578067 CIZ1Q9ULV3 898 aaPredicted RBP33.53■■■□□ 2.96
LIMD2-203ENST00000578067 NUP98P52948 1817 aa33.53■■■□□ 2.96
LIMD2-203ENST00000578067 RREB1Q92766 1687 aa33.53■■■□□ 2.96
LIMD2-203ENST00000578067 ZNF34Q8IZ26 560 aa33.52■■■□□ 2.96
LIMD2-203ENST00000578067 SYNE4Q8N205 404 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms